川口 修治

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氏名(漢字／フリガナ／アルファベット表記)
川口 修治／カワグチ シュウジ／Kawaguchi, Shuji
所属部署・職名(部局／所属／講座等／職名)
医学研究科／京都大学・マギル大学ゲノム医学国際連携専攻／准教授
学部兼担
部局 所属 講座等 職名
医学部
取得学位
学位名(日本語) 学位名(英語) 大学(日本語) 大学(英語) 取得区分
修士（教育学） 東京学芸大学
博士（数理学） 九州大学
researchmap URL
https://researchmap.jp/7000008047
研究テーマ
(日本語)
HLAを始めとする高多型ゲノムデータの高度解析手法開発。 疾患レジストリを活用した難治性稀少疾患の解明のための機械学習・数理統計手法開発
(英語)
Development of analytical method for highly polymorphic genomic region. Construction of AI based analysis system for rare diseases data on integrated registries.
研究分野（キーワード）
キーワード(日本語) キーワード(英語)
ゲノム医科学 genomic medicine
応用統計学 applied statistics
バイオインフォマティクス bioinformatics
機械学習 machine learning
論文
著者 著者(日本語) 著者(英語) タイトル タイトル(日本語) タイトル(英語) 書誌情報等 書誌情報等(日本語) 書誌情報等(英語) 出版年月 査読の有無 記述言語 掲載種別 公開
Kawaguchi S, Higasa K, Yamada R, Matsuda F Kawaguchi S, Higasa K, Yamada R, Matsuda F Kawaguchi S, Higasa K, Yamada R, Matsuda F Comprehensive HLA Typing from a Current Allele Database Using Next-Generation Sequencing Data. Comprehensive HLA Typing from a Current Allele Database Using Next-Generation Sequencing Data. Comprehensive HLA Typing from a Current Allele Database Using Next-Generation Sequencing Data. Methods in molecular biology (Clifton, N.J.), 1802, 225-233 Methods in molecular biology (Clifton, N.J.), 1802, 225-233 Methods in molecular biology (Clifton, N.J.), 1802, 225-233 2018 公開
Kawaguchi S, Higasa K, Shimizu M, Yamada R, Matsuda F Kawaguchi S, Higasa K, Shimizu M, Yamada R, Matsuda F Kawaguchi S, Higasa K, Shimizu M, Yamada R, Matsuda F HLA-HD: An accurate HLA typing algorithm for next-generation sequencing data. HLA-HD: An accurate HLA typing algorithm for next-generation sequencing data. HLA-HD: An accurate HLA typing algorithm for next-generation sequencing data. Human mutation, 38, 7, 788-797 Human mutation, 38, 7, 788-797 Human mutation, 38, 7, 788-797 2017/07 有 公開
寺尾 知可史, 日笠 幸一郎, 三森 経世, 岡崎 和一, 千葉 勉, 川 茂幸, 松田 文彦, 太田 正穂, 塩川 雅広, 栗山 勝利, 児玉 裕三, 内田 一茂, 山口 泉, 川口 喬久, 川口 修治 寺尾 知可史, 日笠 幸一郎, 三森 経世, 岡崎 和一, 千葉 勉, 川 茂幸, 松田 文彦, 太田 正穂, 塩川 雅広, 栗山 勝利, 児玉 裕三, 内田 一茂, 山口 泉, 川口 喬久, 川口 修治 寺尾 知可史, 日笠 幸一郎, 三森 経世, 岡崎 和一, 千葉 勉, 川 茂幸, 松田 文彦, 太田 正穂, 塩川 雅広, 栗山 勝利, 児玉 裕三, 内田 一茂, 山口 泉, 川口 喬久, 川口 修治 KS-3　IgG4関連疾患はHLA領域とFCGR2B領域に関連する KS-3　IgG4関連疾患はHLA領域とFCGR2B領域に関連する KS-3　IgG4関連疾患はHLA領域とFCGR2B領域に関連する 日本臨床免疫学会会誌, 40, 4, 293a-293a 日本臨床免疫学会会誌, 40, 4, 293a-293a 日本臨床免疫学会会誌, 40, 4, 293a-293a 2017 有 日本語 公開
The Fantom Consortium,RIKEN PMII,RIKEN CLST (DGT),Alistair R. R. Forrest,Hideya Kawaji,Michael Rehli,J. Kenneth Baillie,Michiel J. L. de Hoon,Vanja Haberle,Timo Lassmann,Ivan V. Kulakovskiy,Marina Lizio,Masayoshi Itoh,Robin Andersson,Christopher J. Mungall,Terrence F. Meehan,Sebastian Schmeier,Nicolas Bertin,Mette Jørgensen,Emmanuel Dimont,Erik Arner,Christian Schmidl,Ulf Schaefer,Array,Charles Plessy,Array,Jessica Severin,Colin A. M. Semple,Yuri Ishizu,Robert S. Young,Margherita Francescatto,Array,Davide Albanese,Gabriel M. Altschuler,Takahiro Arakawa,John A. C. Archer,Peter Arner,Magda Babina,Sarah Rennie,Piotr J. Balwierz,Anthony G. Beckhouse,Swati Pradhan-Bhatt,Judith A. Blake,Antje Blumenthal,Beatrice Bodega,Alessandro Bonetti,James Briggs,Frank Brombacher,A. Maxwell Burroughs,Andrea Califano,Carlo V. Cannistraci,Daniel Carbajo,Yun Chen,Array,Array,Hans Clevers,Emiliano Dalla,Carrie A. Davis,Michael Detmar,Alexander D. Diehl,Taeko Dohi,Finn Drabløs,Albert S. B. Edge,Matthias Edinger,Karl Ekwall,Mitsuhiro Endoh,Hideki Enomoto,Michela Fagiolini,Lynsey Fairbairn,Hai Fang,Mary C. Farach-Carson,Geoffrey J. Faulkner,Alexander V. Favorov,Array,Martin C. Frith,Rie Fujita,Shiro Fukuda,Cesare Furlanello,Masaaki Furuno,Jun-ichi Furusawa,Teunis B. Geijtenbeek,Andrew P. Gibson,Thomas R. Gingeras,Daniel Goldowitz,Julian Gough,Sven Guhl,Reto Guler,Stefano Gustincich,Thomas J. Ha,Masahide Hamaguchi,Mitsuko Hara,Matthias Harbers,Jayson Harshbarger,Akira Hasegawa,Yuki Hasegawa,Takehiro Hashimoto,Meenhard Herlyn,Kelly J. Hitchens,Shannan J. Ho Sui,Oliver M. Hofmann,Ilka Hoof,Fumi Hori,Lukasz Huminiecki,Kei Iida,Tomokatsu Ikawa,Boris R. Jankovic,Hui Jia,Anagha Joshi,Giuseppe Jurman,Bogumil Kaczkowski,Chieko Kai,Kaoru Kaida,Ai Kaiho,Kazuhiro Kajiyama,Mutsumi Kanamori-Katayama,Artem S. Kasianov,Takeya Kasukawa,Shintaro Katayama,Sachi Kato,Shuji Kawaguchi,Hiroshi Kawamoto,Yuki I. Kawamura,Tsugumi Kawashima,Judith S. Kempfle,Tony J. Kenna,Juha Kere,Levon M. Khachigian,Toshio Kitamura,S. Peter Klinken,Alan J. Knox,Miki Kojima,Soichi Kojima,Naoto Kondo,Haruhiko Koseki,Shigeo Koyasu,Sarah Krampitz,Atsutaka Kubosaki,Andrew T. Kwon,Jeroen F. J. Laros,Weonju Lee,Array,Kang Li,Berit Lilje,Leonard Lipovich,Alan Mackay-Sim,Ri-ichiroh Manabe,Jessica C. Mar,Benoit Marchand,Anthony Mathelier,Niklas Mejhert,Alison M. Meynert,Yosuke Mizuno,David A. de Lima Morais,Hiromasa Morikawa,Mitsuru Morimoto,Kazuyo Moro,Efthymios Motakis,Hozumi Motohashi,Christine Mummery,Mitsuyoshi Murata,Sayaka Nagao-Sato,Yutaka Nakachi,Fumio Nakahara,Toshiyuki Nakamura,Yukio Nakamura,Kenichi Nakazato,Erik van Nimwegen,Noriko Ninomiya,Hiromi Nishiyori,Shohei Noma,Tadasuke Nozaki,Soichi Ogishima,Naganari Ohkura,Hiroko Ohmiya,Hiroshi Ohno,Mitsuhiro Ohshima,Mariko Okada-Hatakeyama,Yasushi Okazaki,Valerio Orlando,Dmitry A. Ovchinnikov,Arnab Pain,Robert Passier,Margaret Patrikakis,Array,Silvano Piazza,James G. D. Prendergast,Array,Jordan A. Ramilowski,Array,Timothy Ravasi,Patrizia Rizzu,Marco Roncador,Sugata Roy,Morten B. Rye,Eri Saijyo,Antti Sajantila,Akiko Saka,Shimon Sakaguchi,Mizuho Sakai,Hiroki Sato,Hironori Sato,Suzana Savvi,Alka Saxena,Claudio Schneider,Erik A. Schultes,Gundula G. Schulze-Tanzil,Anita Schwegmann,Thierry Sengstag,Guojun Sheng,Hisashi Shimoji,Yishai Shimoni,Jay W. Shin,Christophe Simon,Daisuke Sugiyama,Takaaki Sugiyama,Masanori Suzuki,Naoko Suzuki,Rolf K. Swoboda,Peter A. C. 't Hoen,Michihira Tagami,Naoko Takahashi,Jun Takai,Hiroshi Tanaka,Hideki Tatsukawa,Zuotian Tatum,Mark Thompson,Hiroo Toyoda,Tetsuro Toyoda,Eivind Valen,Marc van de Wetering,Linda M. van den Berg,Roberto Verardo,Dipti Vijayan,Array,Wyeth W. Wasserman,Shoko Watanabe,Christine A. Wells,Louise N. Winteringham,Ernst Wolvetang,Emily J. Wood,Yoko Yamaguchi,Masayuki Yamamoto,Misako Yoneda,Yohei Yonekura,Shigehiro Yoshida,Susan E. Zabierowski,Peter G. Zhang,Xiaobei Zhao,Silvia Zucchelli,Kim M. Summers,Harukazu Suzuki,Carsten O. Daub,Jun Kawai,Peter Heutink,Winston Hide,Tom C. Freeman,Boris Lenhard,Vladimir B. Bajic,Martin S. Taylor,Vsevolod J. Makeev,Albin Sandelin,David A. Hume,Piero Carninci,Yoshihide Hayashizaki The Fantom Consortium,RIKEN PMII,RIKEN CLST (DGT),Alistair R. R. Forrest,Hideya Kawaji,Michael Rehli,J. Kenneth Baillie,Michiel J. L. de Hoon,Vanja Haberle,Timo Lassmann,Ivan V. Kulakovskiy,Marina Lizio,Masayoshi Itoh,Robin Andersson,Christopher J. Mungall,Terrence F. Meehan,Sebastian Schmeier,Nicolas Bertin,Mette Jørgensen,Emmanuel Dimont,Erik Arner,Christian Schmidl,Ulf Schaefer,Array,Charles Plessy,Array,Jessica Severin,Colin A. M. Semple,Yuri Ishizu,Robert S. Young,Margherita Francescatto,Array,Davide Albanese,Gabriel M. Altschuler,Takahiro Arakawa,John A. C. Archer,Peter Arner,Magda Babina,Sarah Rennie,Piotr J. Balwierz,Anthony G. Beckhouse,Swati Pradhan-Bhatt,Judith A. Blake,Antje Blumenthal,Beatrice Bodega,Alessandro Bonetti,James Briggs,Frank Brombacher,A. Maxwell Burroughs,Andrea Califano,Carlo V. Cannistraci,Daniel Carbajo,Yun Chen,Array,Array,Hans Clevers,Emiliano Dalla,Carrie A. Davis,Michael Detmar,Alexander D. Diehl,Taeko Dohi,Finn Drabløs,Albert S. B. Edge,Matthias Edinger,Karl Ekwall,Mitsuhiro Endoh,Hideki Enomoto,Michela Fagiolini,Lynsey Fairbairn,Hai Fang,Mary C. Farach-Carson,Geoffrey J. Faulkner,Alexander V. Favorov,Array,Martin C. Frith,Rie Fujita,Shiro Fukuda,Cesare Furlanello,Masaaki Furuno,Jun-ichi Furusawa,Teunis B. Geijtenbeek,Andrew P. Gibson,Thomas R. Gingeras,Daniel Goldowitz,Julian Gough,Sven Guhl,Reto Guler,Stefano Gustincich,Thomas J. Ha,Masahide Hamaguchi,Mitsuko Hara,Matthias Harbers,Jayson Harshbarger,Akira Hasegawa,Yuki Hasegawa,Takehiro Hashimoto,Meenhard Herlyn,Kelly J. Hitchens,Shannan J. Ho Sui,Oliver M. Hofmann,Ilka Hoof,Fumi Hori,Lukasz Huminiecki,Kei Iida,Tomokatsu Ikawa,Boris R. Jankovic,Hui Jia,Anagha Joshi,Giuseppe Jurman,Bogumil Kaczkowski,Chieko Kai,Kaoru Kaida,Ai Kaiho,Kazuhiro Kajiyama,Mutsumi Kanamori-Katayama,Artem S. Kasianov,Takeya Kasukawa,Shintaro Katayama,Sachi Kato,Shuji Kawaguchi,Hiroshi Kawamoto,Yuki I. Kawamura,Tsugumi Kawashima,Judith S. Kempfle,Tony J. Kenna,Juha Kere,Levon M. Khachigian,Toshio Kitamura,S. Peter Klinken,Alan J. Knox,Miki Kojima,Soichi Kojima,Naoto Kondo,Haruhiko Koseki,Shigeo Koyasu,Sarah Krampitz,Atsutaka Kubosaki,Andrew T. Kwon,Jeroen F. J. Laros,Weonju Lee,Array,Kang Li,Berit Lilje,Leonard Lipovich,Alan Mackay-Sim,Ri-ichiroh Manabe,Jessica C. Mar,Benoit Marchand,Anthony Mathelier,Niklas Mejhert,Alison M. Meynert,Yosuke Mizuno,David A. de Lima Morais,Hiromasa Morikawa,Mitsuru Morimoto,Kazuyo Moro,Efthymios Motakis,Hozumi Motohashi,Christine Mummery,Mitsuyoshi Murata,Sayaka Nagao-Sato,Yutaka Nakachi,Fumio Nakahara,Toshiyuki Nakamura,Yukio Nakamura,Kenichi Nakazato,Erik van Nimwegen,Noriko Ninomiya,Hiromi Nishiyori,Shohei Noma,Tadasuke Nozaki,Soichi Ogishima,Naganari Ohkura,Hiroko Ohmiya,Hiroshi Ohno,Mitsuhiro Ohshima,Mariko Okada-Hatakeyama,Yasushi Okazaki,Valerio Orlando,Dmitry A. Ovchinnikov,Arnab Pain,Robert Passier,Margaret Patrikakis,Array,Silvano Piazza,James G. D. Prendergast,Array,Jordan A. Ramilowski,Array,Timothy Ravasi,Patrizia Rizzu,Marco Roncador,Sugata Roy,Morten B. Rye,Eri Saijyo,Antti Sajantila,Akiko Saka,Shimon Sakaguchi,Mizuho Sakai,Hiroki Sato,Hironori Sato,Suzana Savvi,Alka Saxena,Claudio Schneider,Erik A. Schultes,Gundula G. Schulze-Tanzil,Anita Schwegmann,Thierry Sengstag,Guojun Sheng,Hisashi Shimoji,Yishai Shimoni,Jay W. Shin,Christophe Simon,Daisuke Sugiyama,Takaaki Sugiyama,Masanori Suzuki,Naoko Suzuki,Rolf K. Swoboda,Peter A. C. 't Hoen,Michihira Tagami,Naoko Takahashi,Jun Takai,Hiroshi Tanaka,Hideki Tatsukawa,Zuotian Tatum,Mark Thompson,Hiroo Toyoda,Tetsuro Toyoda,Eivind Valen,Marc van de Wetering,Linda M. van den Berg,Roberto Verardo,Dipti Vijayan,Array,Wyeth W. Wasserman,Shoko Watanabe,Christine A. Wells,Louise N. Winteringham,Ernst Wolvetang,Emily J. Wood,Yoko Yamaguchi,Masayuki Yamamoto,Misako Yoneda,Yohei Yonekura,Shigehiro Yoshida,Susan E. Zabierowski,Peter G. Zhang,Xiaobei Zhao,Silvia Zucchelli,Kim M. Summers,Harukazu Suzuki,Carsten O. Daub,Jun Kawai,Peter Heutink,Winston Hide,Tom C. Freeman,Boris Lenhard,Vladimir B. Bajic,Martin S. Taylor,Vsevolod J. Makeev,Albin Sandelin,David A. Hume,Piero Carninci,Yoshihide Hayashizaki The Fantom Consortium,RIKEN PMII,RIKEN CLST (DGT),Alistair R. R. Forrest,Hideya Kawaji,Michael Rehli,J. Kenneth Baillie,Michiel J. L. de Hoon,Vanja Haberle,Timo Lassmann,Ivan V. Kulakovskiy,Marina Lizio,Masayoshi Itoh,Robin Andersson,Christopher J. Mungall,Terrence F. Meehan,Sebastian Schmeier,Nicolas Bertin,Mette Jørgensen,Emmanuel Dimont,Erik Arner,Christian Schmidl,Ulf Schaefer,Array,Charles Plessy,Array,Jessica Severin,Colin A. M. Semple,Yuri Ishizu,Robert S. Young,Margherita Francescatto,Array,Davide Albanese,Gabriel M. Altschuler,Takahiro Arakawa,John A. C. Archer,Peter Arner,Magda Babina,Sarah Rennie,Piotr J. Balwierz,Anthony G. Beckhouse,Swati Pradhan-Bhatt,Judith A. Blake,Antje Blumenthal,Beatrice Bodega,Alessandro Bonetti,James Briggs,Frank Brombacher,A. Maxwell Burroughs,Andrea Califano,Carlo V. Cannistraci,Daniel Carbajo,Yun Chen,Array,Array,Hans Clevers,Emiliano Dalla,Carrie A. Davis,Michael Detmar,Alexander D. Diehl,Taeko Dohi,Finn Drabløs,Albert S. B. Edge,Matthias Edinger,Karl Ekwall,Mitsuhiro Endoh,Hideki Enomoto,Michela Fagiolini,Lynsey Fairbairn,Hai Fang,Mary C. Farach-Carson,Geoffrey J. Faulkner,Alexander V. Favorov,Array,Martin C. Frith,Rie Fujita,Shiro Fukuda,Cesare Furlanello,Masaaki Furuno,Jun-ichi Furusawa,Teunis B. Geijtenbeek,Andrew P. Gibson,Thomas R. Gingeras,Daniel Goldowitz,Julian Gough,Sven Guhl,Reto Guler,Stefano Gustincich,Thomas J. Ha,Masahide Hamaguchi,Mitsuko Hara,Matthias Harbers,Jayson Harshbarger,Akira Hasegawa,Yuki Hasegawa,Takehiro Hashimoto,Meenhard Herlyn,Kelly J. Hitchens,Shannan J. Ho Sui,Oliver M. Hofmann,Ilka Hoof,Fumi Hori,Lukasz Huminiecki,Kei Iida,Tomokatsu Ikawa,Boris R. Jankovic,Hui Jia,Anagha Joshi,Giuseppe Jurman,Bogumil Kaczkowski,Chieko Kai,Kaoru Kaida,Ai Kaiho,Kazuhiro Kajiyama,Mutsumi Kanamori-Katayama,Artem S. Kasianov,Takeya Kasukawa,Shintaro Katayama,Sachi Kato,Shuji Kawaguchi,Hiroshi Kawamoto,Yuki I. Kawamura,Tsugumi Kawashima,Judith S. Kempfle,Tony J. Kenna,Juha Kere,Levon M. Khachigian,Toshio Kitamura,S. Peter Klinken,Alan J. Knox,Miki Kojima,Soichi Kojima,Naoto Kondo,Haruhiko Koseki,Shigeo Koyasu,Sarah Krampitz,Atsutaka Kubosaki,Andrew T. Kwon,Jeroen F. J. Laros,Weonju Lee,Array,Kang Li,Berit Lilje,Leonard Lipovich,Alan Mackay-Sim,Ri-ichiroh Manabe,Jessica C. Mar,Benoit Marchand,Anthony Mathelier,Niklas Mejhert,Alison M. Meynert,Yosuke Mizuno,David A. de Lima Morais,Hiromasa Morikawa,Mitsuru Morimoto,Kazuyo Moro,Efthymios Motakis,Hozumi Motohashi,Christine Mummery,Mitsuyoshi Murata,Sayaka Nagao-Sato,Yutaka Nakachi,Fumio Nakahara,Toshiyuki Nakamura,Yukio Nakamura,Kenichi Nakazato,Erik van Nimwegen,Noriko Ninomiya,Hiromi Nishiyori,Shohei Noma,Tadasuke Nozaki,Soichi Ogishima,Naganari Ohkura,Hiroko Ohmiya,Hiroshi Ohno,Mitsuhiro Ohshima,Mariko Okada-Hatakeyama,Yasushi Okazaki,Valerio Orlando,Dmitry A. Ovchinnikov,Arnab Pain,Robert Passier,Margaret Patrikakis,Array,Silvano Piazza,James G. D. Prendergast,Array,Jordan A. Ramilowski,Array,Timothy Ravasi,Patrizia Rizzu,Marco Roncador,Sugata Roy,Morten B. Rye,Eri Saijyo,Antti Sajantila,Akiko Saka,Shimon Sakaguchi,Mizuho Sakai,Hiroki Sato,Hironori Sato,Suzana Savvi,Alka Saxena,Claudio Schneider,Erik A. Schultes,Gundula G. Schulze-Tanzil,Anita Schwegmann,Thierry Sengstag,Guojun Sheng,Hisashi Shimoji,Yishai Shimoni,Jay W. Shin,Christophe Simon,Daisuke Sugiyama,Takaaki Sugiyama,Masanori Suzuki,Naoko Suzuki,Rolf K. Swoboda,Peter A. C. 't Hoen,Michihira Tagami,Naoko Takahashi,Jun Takai,Hiroshi Tanaka,Hideki Tatsukawa,Zuotian Tatum,Mark Thompson,Hiroo Toyoda,Tetsuro Toyoda,Eivind Valen,Marc van de Wetering,Linda M. van den Berg,Roberto Verardo,Dipti Vijayan,Array,Wyeth W. Wasserman,Shoko Watanabe,Christine A. Wells,Louise N. Winteringham,Ernst Wolvetang,Emily J. Wood,Yoko Yamaguchi,Masayuki Yamamoto,Misako Yoneda,Yohei Yonekura,Shigehiro Yoshida,Susan E. Zabierowski,Peter G. Zhang,Xiaobei Zhao,Silvia Zucchelli,Kim M. Summers,Harukazu Suzuki,Carsten O. Daub,Jun Kawai,Peter Heutink,Winston Hide,Tom C. Freeman,Boris Lenhard,Vladimir B. Bajic,Martin S. Taylor,Vsevolod J. Makeev,Albin Sandelin,David A. Hume,Piero Carninci,Yoshihide Hayashizaki A promoter-level mammalian expression atlas. A promoter-level mammalian expression atlas. A promoter-level mammalian expression atlas. Nature, 507, 7493, 462-470 Nature, 507, 7493, 462-470 Nature, 507, 7493, 462-470 2014 有 公開
Kawaguchi S, Iida K, Harada E, Hanada K, Matsui A, Okamoto M, Shinozaki K, Seki M, Toyoda T Kawaguchi S, Iida K, Harada E, Hanada K, Matsui A, Okamoto M, Shinozaki K, Seki M, Toyoda T Kawaguchi S, Iida K, Harada E, Hanada K, Matsui A, Okamoto M, Shinozaki K, Seki M, Toyoda T Positional correlation analysis improves reconstruction of full-length transcripts and alternative isoforms from noisy array signals or short reads. Positional correlation analysis improves reconstruction of full-length transcripts and alternative isoforms from noisy array signals or short reads. Positional correlation analysis improves reconstruction of full-length transcripts and alternative isoforms from noisy array signals or short reads. Bioinformatics (Oxford, England), 28, 7, 929-937 Bioinformatics (Oxford, England), 28, 7, 929-937 Bioinformatics (Oxford, England), 28, 7, 929-937 2012/04 有 公開
Iida K, Kawaguchi S, Kobayashi N, Yoshida Y, Ishii M, Harada E, Hanada K, Matsui A, Okamoto M, Ishida J, Tanaka M, Morosawa T, Seki M, Toyoda T Iida K, Kawaguchi S, Kobayashi N, Yoshida Y, Ishii M, Harada E, Hanada K, Matsui A, Okamoto M, Ishida J, Tanaka M, Morosawa T, Seki M, Toyoda T Iida K, Kawaguchi S, Kobayashi N, Yoshida Y, Ishii M, Harada E, Hanada K, Matsui A, Okamoto M, Ishida J, Tanaka M, Morosawa T, Seki M, Toyoda T ARTADE2DB: improved statistical inferences for Arabidopsis gene functions and structure predictions by dynamic structure-based dynamic expression (DSDE) analyses. ARTADE2DB: improved statistical inferences for Arabidopsis gene functions and structure predictions by dynamic structure-based dynamic expression (DSDE) analyses. ARTADE2DB: improved statistical inferences for Arabidopsis gene functions and structure predictions by dynamic structure-based dynamic expression (DSDE) analyses. Plant & cell physiology, 52, 2, 254-264 Plant & cell physiology, 52, 2, 254-264 Plant & cell physiology, 52, 2, 254-264 2011/02 有 公開
Matsui A, Ishida J, Morosawa T, Okamoto M, Kim JM, Kurihara Y, Kawashima M, Tanaka M, To TK, Nakaminami K, Kaminuma E, Endo TA, Mochizuki Y, Kawaguchi S, Kobayashi N, Shinozaki K, Toyoda T, Seki M Matsui A, Ishida J, Morosawa T, Okamoto M, Kim JM, Kurihara Y, Kawashima M, Tanaka M, To TK, Nakaminami K, Kaminuma E, Endo TA, Mochizuki Y, Kawaguchi S, Kobayashi N, Shinozaki K, Toyoda T, Seki M Matsui A, Ishida J, Morosawa T, Okamoto M, Kim JM, Kurihara Y, Kawashima M, Tanaka M, To TK, Nakaminami K, Kaminuma E, Endo TA, Mochizuki Y, Kawaguchi S, Kobayashi N, Shinozaki K, Toyoda T, Seki M Arabidopsis tiling array analysis to identify the stress-responsive genes. Arabidopsis tiling array analysis to identify the stress-responsive genes. Arabidopsis tiling array analysis to identify the stress-responsive genes. Methods in molecular biology (Clifton, N.J.), 639, 141-155 Methods in molecular biology (Clifton, N.J.), 639, 141-155 Methods in molecular biology (Clifton, N.J.), 639, 141-155 2010 有 公開
Makita Y, Kobayashi N, Mochizuki Y, Yoshida Y, Asano S, Heida N, Deshpande M, Bhatia R, Matsushima A, Ishii M, Kawaguchi S, Iida K, Hanada K, Kuromori T, Seki M, Shinozaki K, Toyoda T Makita Y, Kobayashi N, Mochizuki Y, Yoshida Y, Asano S, Heida N, Deshpande M, Bhatia R, Matsushima A, Ishii M, Kawaguchi S, Iida K, Hanada K, Kuromori T, Seki M, Shinozaki K, Toyoda T Makita Y, Kobayashi N, Mochizuki Y, Yoshida Y, Asano S, Heida N, Deshpande M, Bhatia R, Matsushima A, Ishii M, Kawaguchi S, Iida K, Hanada K, Kuromori T, Seki M, Shinozaki K, Toyoda T PosMed-plus: an intelligent search engine that inferentially integrates cross-species information resources for molecular breeding of plants. PosMed-plus: an intelligent search engine that inferentially integrates cross-species information resources for molecular breeding of plants. PosMed-plus: an intelligent search engine that inferentially integrates cross-species information resources for molecular breeding of plants. Plant & cell physiology, 50, 7, 1249-1259 Plant & cell physiology, 50, 7, 1249-1259 Plant & cell physiology, 50, 7, 1249-1259 2009/07 有 公開
Matsushima A, Kobayashi N, Mochizuki Y, Ishii M, Kawaguchi S, Endo TA, Umetsu R, Makita Y, Toyoda T Matsushima A, Kobayashi N, Mochizuki Y, Ishii M, Kawaguchi S, Endo TA, Umetsu R, Makita Y, Toyoda T Matsushima A, Kobayashi N, Mochizuki Y, Ishii M, Kawaguchi S, Endo TA, Umetsu R, Makita Y, Toyoda T OmicBrowse: a Flash-based high-performance graphics interface for genomic resources. OmicBrowse: a Flash-based high-performance graphics interface for genomic resources. OmicBrowse: a Flash-based high-performance graphics interface for genomic resources. Nucleic acids research, 37, Web Server issue, W57-62 Nucleic acids research, 37, Web Server issue, W57-62 Nucleic acids research, 37, Web Server issue, W57-62 2009/07 有 公開
Ryuei Nishii,Yoko Sawamura,Akiko Nakamoto,Shuji Kawaguchi Ryuei Nishii,Yoko Sawamura,Akiko Nakamoto,Shuji Kawaguchi Ryuei Nishii,Yoko Sawamura,Akiko Nakamoto,Shuji Kawaguchi Contextual Unmixing of Geospatial Data based on Gaussian Mixture Models and Markov Random Fields. Contextual Unmixing of Geospatial Data based on Gaussian Mixture Models and Markov Random Fields. Contextual Unmixing of Geospatial Data based on Gaussian Mixture Models and Markov Random Fields. IEEE International Geoscience & Remote Sensing Symposium, IGARSS 2008, July 8-11, 2008, Boston, Massachusetts, USA, Proceedings, 77-80 IEEE International Geoscience & Remote Sensing Symposium, IGARSS 2008, July 8-11, 2008, Boston, Massachusetts, USA, Proceedings, 77-80 IEEE International Geoscience & Remote Sensing Symposium, IGARSS 2008, July 8-11, 2008, Boston, Massachusetts, USA, Proceedings, 77-80 2008 有 公開
Norio Kobayashi,Yuko Makita,Eli Kaminuma,Shuji Kawaguchi,Yuko Yoshida,Yoshiki Mochizuki,Akihiro Matsushima,Manabu Ishii,Ryo Umetsu,Satomi Asano,Naohiko Heida,Tetsuya Sakurai,Takashi Kuromori,Kazuo Shinozaki,Tetsuro Toyoda Norio Kobayashi,Yuko Makita,Eli Kaminuma,Shuji Kawaguchi,Yuko Yoshida,Yoshiki Mochizuki,Akihiro Matsushima,Manabu Ishii,Ryo Umetsu,Satomi Asano,Naohiko Heida,Tetsuya Sakurai,Takashi Kuromori,Kazuo Shinozaki,Tetsuro Toyoda Norio Kobayashi,Yuko Makita,Eli Kaminuma,Shuji Kawaguchi,Yuko Yoshida,Yoshiki Mochizuki,Akihiro Matsushima,Manabu Ishii,Ryo Umetsu,Satomi Asano,Naohiko Heida,Tetsuya Sakurai,Takashi Kuromori,Kazuo Shinozaki,Tetsuro Toyoda A Secure Data Repository Integrating Huge Volumes of Digital Contents as a Semantic Web. A Secure Data Repository Integrating Huge Volumes of Digital Contents as a Semantic Web. A Secure Data Repository Integrating Huge Volumes of Digital Contents as a Semantic Web. Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences ( SWAT4LS ) Edinburgh, United Kingdom, November 28, 2008. Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences ( SWAT4LS ) Edinburgh, United Kingdom, November 28, 2008. Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences ( SWAT4LS ) Edinburgh, United Kingdom, November 28, 2008. 2008 有 公開
花田 耕介, 川口 修治, 豊田 哲郎, 篠崎 一雄 花田 耕介, 川口 修治, 豊田 哲郎, 篠崎 一雄 花田 耕介, 川口 修治, 豊田 哲郎, 篠崎 一雄 　mRNAの転写活性を示すncRNA遺伝子の網羅的な探索 　mRNAの転写活性を示すncRNA遺伝子の網羅的な探索 　mRNAの転写活性を示すncRNA遺伝子の網羅的な探索 日本化学会情報化学部会誌, 26, 3 日本化学会情報化学部会誌, 26, 3 日本化学会情報化学部会誌, 26, 3 2008 有 日本語 公開
Kawaguchi Shuji, Nishii Ryuei Kawaguchi Shuji, Nishii Ryuei Kawaguchi Shuji, Nishii Ryuei Hyperspectral image classification by bootstrap AdaBoost with random decision stumps Hyperspectral image classification by bootstrap AdaBoost with random decision stumps Hyperspectral image classification by bootstrap AdaBoost with random decision stumps IEEE TRANSACTIONS ON GEOSCIENCE AND REMOTE SENSING, 45, 11, 3845-3851 IEEE TRANSACTIONS ON GEOSCIENCE AND REMOTE SENSING, 45, 11, 3845-3851 IEEE TRANSACTIONS ON GEOSCIENCE AND REMOTE SENSING, 45, 11, 3845-3851 2007/11 有 公開
Shuji Kawaguchi,Ryuei Nishii Shuji Kawaguchi,Ryuei Nishii Shuji Kawaguchi,Ryuei Nishii Hyperspectral image classification by recursive spatial boosting based on the bootstrap method. Hyperspectral image classification by recursive spatial boosting based on the bootstrap method. Hyperspectral image classification by recursive spatial boosting based on the bootstrap method. IEEE International Geoscience & Remote Sensing Symposium, IGARSS 2007, July 23-28, 2007, Barcelona, Spain, Proceedings, 1751-1754 IEEE International Geoscience & Remote Sensing Symposium, IGARSS 2007, July 23-28, 2007, Barcelona, Spain, Proceedings, 1751-1754 IEEE International Geoscience & Remote Sensing Symposium, IGARSS 2007, July 23-28, 2007, Barcelona, Spain, Proceedings, 1751-1754 2007 有 公開
川口 修治, 山崎 謙介, 西井 龍映 川口 修治, 山崎 謙介, 西井 龍映 KAWAGUCHI Shuji, YAMAZAKI Kensuke, NISHII Ryuei ミクセルを考慮したマルコフ確率場に基づくリモートセンシング画像の教師なし土地被覆分類 ミクセルを考慮したマルコフ確率場に基づくリモートセンシング画像の教師なし土地被覆分類 Unsupervised Contextual Classification of Remotely Sensed Imagery by Taking Mixel Information into Account 日本リモートセンシング学会誌 = Journal of the Remote Sensing Society of Japan, 26, 2, 107-116 日本リモートセンシング学会誌 = Journal of the Remote Sensing Society of Japan, 26, 2, 107-116 Journal of the Remote Sensing Society of Japan, 26, 2, 107-116 2006/04 有 日本語 公開
Shuji Kawaguchi,Ryuei Nishii Shuji Kawaguchi,Ryuei Nishii Shuji Kawaguchi,Ryuei Nishii Hyperspectral Image Classification by AdaBoost with Decision Stumps Based on Composed Feature Variables. Hyperspectral Image Classification by AdaBoost with Decision Stumps Based on Composed Feature Variables. Hyperspectral Image Classification by AdaBoost with Decision Stumps Based on Composed Feature Variables. IEEE International Geoscience & Remote Sensing Symposium, IGARSS 2006, July 31 - August 4, 2006, Denver, Colorado, USA, Proceedings, 936-939 IEEE International Geoscience & Remote Sensing Symposium, IGARSS 2006, July 31 - August 4, 2006, Denver, Colorado, USA, Proceedings, 936-939 IEEE International Geoscience & Remote Sensing Symposium, IGARSS 2006, July 31 - August 4, 2006, Denver, Colorado, USA, Proceedings, 936-939 2006 有 公開
Nishii Ryuei, Kawaguchi Shuji Nishii Ryuei, Kawaguchi Shuji Nishii Ryuei, Kawaguchi Shuji AdaBoost with different costs for misclassification and its applications to contextual image classification - art. no. 63650S AdaBoost with different costs for misclassification and its applications to contextual image classification - art. no. 63650S AdaBoost with different costs for misclassification and its applications to contextual image classification - art. no. 63650S Image and Signal Processing for Remote Sensing XII, 6365, S3650 Image and Signal Processing for Remote Sensing XII, 6365, S3650 Image and Signal Processing for Remote Sensing XII, 6365, S3650 2006 有 公開
Kawaguchi Shuji, Nishii Ryuei Kawaguchi Shuji, Nishii Ryuei Kawaguchi Shuji, Nishii Ryuei Contextual unsupervised classification of remotely sensed imagery with mixels - art. no. 63650R Contextual unsupervised classification of remotely sensed imagery with mixels - art. no. 63650R Contextual unsupervised classification of remotely sensed imagery with mixels - art. no. 63650R Image and Signal Processing for Remote Sensing XII, 6365, R3650 Image and Signal Processing for Remote Sensing XII, 6365, R3650 Image and Signal Processing for Remote Sensing XII, 6365, R3650 2006 有 公開

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タイトル言語:
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著者 著者(日本語) 著者(英語) タイトル タイトル(日本語) タイトル(英語) 書誌情報等 書誌情報等(日本語) 書誌情報等(英語) 出版年月 査読の有無 記述言語 掲載種別 公開
川口 修治, 日笠 幸一郎, 山田 亮, 松田 文彦 川口 修治, 日笠 幸一郎, 山田 亮, 松田 文彦 川口 修治, 日笠 幸一郎, 山田 亮, 松田 文彦 次世代シークエンスデータと国際データベースを用いたHLA遺伝子型の決定 (特集 バイオインフォマティクスの進展・臨床応用) 次世代シークエンスデータと国際データベースを用いたHLA遺伝子型の決定 (特集 バイオインフォマティクスの進展・臨床応用) HLA Allele Typing Using Next-generation Sequencing Data and International Database 最新醫學 = The medical frontline, 74, 2, 214-219 最新醫學 = The medical frontline, 74, 2, 214-219 最新醫學 = The medical frontline, 74, 2, 214-219 2019/02 日本語 公開
タイトル言語:
産業財産権 (特許)
発明者 発明者(日本語) 発明者(英語) 発明の名称 発明の名称(日本語) 発明の名称(英語) 審査の段階 番号 年月 公開
松田 文彦, 川口 修治, 清水 正和, 日笠 幸一郎 松田 文彦, 川口 修治, 清水 正和, 日笠 幸一郎 松田 文彦, 川口 修治, 清水 正和, 日笠 幸一郎 HLA遺伝子のPCRプライマーセット及びそれを用いたシークエンス法 HLA遺伝子のPCRプライマーセット及びそれを用いたシークエンス法 HLA遺伝子のPCRプライマーセット及びそれを用いたシークエンス法 特許公開 特開2018-130036 2018/08/23 公開
松田 文彦, 川口 修治, 日笠 幸一郎, 山田 亮 松田 文彦, 川口 修治, 日笠 幸一郎, 山田 亮 松田 文彦, 川口 修治, 日笠 幸一郎, 山田 亮 被験者のHLA遺伝子のアレルペアを判定する方法 被験者のHLA遺伝子のアレルペアを判定する方法 被験者のHLA遺伝子のアレルペアを判定する方法 特許公開 特開2018-108042 2018/07/12 公開
タイトル言語:
外部資金：競争的資金 (科学研究費補助金)
種別 代表/分担 テーマ(日本語) テーマ(英語) 期間
若手研究(B) 代表 難病解明に向けた大規模HLAシークエンスと多重リスク因子の包括的解析法の確立 （平成28年度分） 2016/04/01〜2017/03/31
若手研究(B) 代表 難病解明に向けた大規模HLAシークエンスと多重リスク因子の包括的解析法の確立 （平成29年度分） 2017/04/01〜2018/03/31
若手研究(B) 代表 難病解明に向けた大規模HLAシークエンスと多重リスク因子の包括的解析法の確立 （平成30年度分） 2018/04/01〜2019/03/31

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