深井 周也

最終更新日時: 2020/05/17 16:14:06

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氏名(漢字/フリガナ/アルファベット表記)
深井 周也/フカイ シュウヤ/Fukai, Shuya
所属部署・職名(部局/所属/講座等/職名)
理学研究科/化学専攻相関化学講座/教授
取得学位
学位名(日本語) 学位名(英語) 大学(日本語) 大学(英語) 取得区分
修士(理学) Master of Science 東京大学 The University of Tokyo
博士(理学) Doctor of Science 東京大学 The University of Tokyo
ORCID ID
https://orcid.org/0000-0002-1241-1443
researchmap URL
https://researchmap.jp/sh8fk1
論文
著者 著者(日本語) 著者(英語) タイトル タイトル(日本語) タイトル(英語) 書誌情報等 書誌情報等(日本語) 書誌情報等(英語) 出版年月 査読の有無 記述言語 掲載種別 公開
Oikawa D, Sato Y, Ohtake F, Komakura K, Hanada K, Sugawara K, Terawaki S, Mizukami Y, Phuong HT, Iio K, Obika S, Fukushi M, Irie T, Tsuruta D, Sakamoto S, Tanaka K, Saeki Y, Fukai S, Tokunaga F. Oikawa D, Sato Y, Ohtake F, Komakura K, Hanada K, Sugawara K, Terawaki S, Mizukami Y, Phuong HT, Iio K, Obika S, Fukushi M, Irie T, Tsuruta D, Sakamoto S, Tanaka K, Saeki Y, Fukai S, Tokunaga F. Oikawa D, Sato Y, Ohtake F, Komakura K, Hanada K, Sugawara K, Terawaki S, Mizukami Y, Phuong HT, Iio K, Obika S, Fukushi M, Irie T, Tsuruta D, Sakamoto S, Tanaka K, Saeki Y, Fukai S, Tokunaga F. Molecular bases for HOIPINs-mediated inhibition of LUBAC and innate immune responses. Molecular bases for HOIPINs-mediated inhibition of LUBAC and innate immune responses. Molecular bases for HOIPINs-mediated inhibition of LUBAC and innate immune responses. Communications Biology, 3, 163 Communications Biology, 3, 163 Communications Biology, 3, 163 2020/04 英語 研究論文(学術雑誌) 公開
Satoshi Yamanaka, Yusuke Sato, Daisuke Oikawa, Eiji Goto, Shuya Fukai, Fuminori Tokunaga, Hirotaka Takahashi, Tatsuya Sawasaki Satoshi Yamanaka, Yusuke Sato, Daisuke Oikawa, Eiji Goto, Shuya Fukai, Fuminori Tokunaga, Hirotaka Takahashi, Tatsuya Sawasaki Satoshi Yamanaka, Yusuke Sato, Daisuke Oikawa, Eiji Goto, Shuya Fukai, Fuminori Tokunaga, Hirotaka Takahashi, Tatsuya Sawasaki Subquinocin, a small molecule inhibitor of CYLD and USP-family deubiquitinating enzymes, promotes NF-κB signaling. Subquinocin, a small molecule inhibitor of CYLD and USP-family deubiquitinating enzymes, promotes NF-κB signaling. Subquinocin, a small molecule inhibitor of CYLD and USP-family deubiquitinating enzymes, promotes NF-κB signaling. Biochemical and biophysical research communications, 524, 1, 1-7 Biochemical and biophysical research communications, 524, 1, 1-7 Biochemical and biophysical research communications, 524, 1, 1-7 2020/03/26 英語 公開
Ryutaro Shirakawa, Sakurako Goto-Ito, Kota Goto, Shonosuke Wakayama, Haremaru Kubo, Natsumi Sakata, Duc Anh Trinh, Atsushi Yamagata, Yusuke Sato, Hiroshi Masumoto, Jinglei Cheng, Toyoshi Fujimoto, Shuya Fukai, Hisanori Horiuchi Ryutaro Shirakawa, Sakurako Goto-Ito, Kota Goto, Shonosuke Wakayama, Haremaru Kubo, Natsumi Sakata, Duc Anh Trinh, Atsushi Yamagata, Yusuke Sato, Hiroshi Masumoto, Jinglei Cheng, Toyoshi Fujimoto, Shuya Fukai, Hisanori Horiuchi Ryutaro Shirakawa, Sakurako Goto-Ito, Kota Goto, Shonosuke Wakayama, Haremaru Kubo, Natsumi Sakata, Duc Anh Trinh, Atsushi Yamagata, Yusuke Sato, Hiroshi Masumoto, Jinglei Cheng, Toyoshi Fujimoto, Shuya Fukai, Hisanori Horiuchi A SNARE geranylgeranyltransferase essential for the organization of the Golgi apparatus. A SNARE geranylgeranyltransferase essential for the organization of the Golgi apparatus. A SNARE geranylgeranyltransferase essential for the organization of the Golgi apparatus. The EMBO journal, e104120 The EMBO journal, e104120 The EMBO journal, e104120 2020/03/03 英語 公開
Maiko Wakita, Atsushi Yamagata, Tomoko Shiroshima, Hironori Izumi, Asami Maeda, Mizuki Sendo, Ayako Imai, Keiko Kubota, Sakurako Goto-Ito, Yusuke Sato, Hisashi Mori, Tomoyuki Yoshida, Shuya Fukai Maiko Wakita, Atsushi Yamagata, Tomoko Shiroshima, Hironori Izumi, Asami Maeda, Mizuki Sendo, Ayako Imai, Keiko Kubota, Sakurako Goto-Ito, Yusuke Sato, Hisashi Mori, Tomoyuki Yoshida, Shuya Fukai Maiko Wakita, Atsushi Yamagata, Tomoko Shiroshima, Hironori Izumi, Asami Maeda, Mizuki Sendo, Ayako Imai, Keiko Kubota, Sakurako Goto-Ito, Yusuke Sato, Hisashi Mori, Tomoyuki Yoshida, Shuya Fukai Structural insights into selective interaction between type IIa receptor protein tyrosine phosphatases and Liprin-α. Structural insights into selective interaction between type IIa receptor protein tyrosine phosphatases and Liprin-α. Structural insights into selective interaction between type IIa receptor protein tyrosine phosphatases and Liprin-α. Nature communications, 11, 1, 649-649 Nature communications, 11, 1, 649-649 Nature communications, 11, 1, 649-649 2020/01/31 英語 公開
Atsushi Yamagata, Shuya Fukai Atsushi Yamagata, Shuya Fukai Atsushi Yamagata, Shuya Fukai Insights into the mechanisms of epilepsy from structural biology of LGI1-ADAM22. Insights into the mechanisms of epilepsy from structural biology of LGI1-ADAM22. Insights into the mechanisms of epilepsy from structural biology of LGI1-ADAM22. Cellular and molecular life sciences : CMLS, 77, 2, 267-274 Cellular and molecular life sciences : CMLS, 77, 2, 267-274 Cellular and molecular life sciences : CMLS, 77, 2, 267-274 2020/01 英語 公開
Yusuke Sato, Hikaru Tsuchiya, Atsushi Yamagata, Kei Okatsu, Keiji Tanaka, Yasushi Saeki, Shuya Fukai Yusuke Sato, Hikaru Tsuchiya, Atsushi Yamagata, Kei Okatsu, Keiji Tanaka, Yasushi Saeki, Shuya Fukai Yusuke Sato, Hikaru Tsuchiya, Atsushi Yamagata, Kei Okatsu, Keiji Tanaka, Yasushi Saeki, Shuya Fukai Structural insights into ubiquitin recognition and Ufd1 interaction of Npl4. Structural insights into ubiquitin recognition and Ufd1 interaction of Npl4. Structural insights into ubiquitin recognition and Ufd1 interaction of Npl4. Nature communications, 10, 1, 5708-5708 Nature communications, 10, 1, 5708-5708 Nature communications, 10, 1, 5708-5708 2019/12/13 英語 公開
Tomio S Takahashi, Yusuke Sato, Atsushi Yamagata, Sakurako Goto-Ito, Masafumi Saijo, Shuya Fukai Tomio S Takahashi, Yusuke Sato, Atsushi Yamagata, Sakurako Goto-Ito, Masafumi Saijo, Shuya Fukai Tomio S Takahashi, Yusuke Sato, Atsushi Yamagata, Sakurako Goto-Ito, Masafumi Saijo, Shuya Fukai Structural basis of ubiquitin recognition by the winged-helix domain of Cockayne syndrome group B protein. Structural basis of ubiquitin recognition by the winged-helix domain of Cockayne syndrome group B protein. Structural basis of ubiquitin recognition by the winged-helix domain of Cockayne syndrome group B protein. Nucleic acids research, 47, 7, 3784-3794 Nucleic acids research, 47, 7, 3784-3794 Nucleic acids research, 47, 7, 3784-3794 2019/04/23 英語 公開
Sakurako Goto-Ito, Nobukatsu Morooka, Atsushi Yamagata, Yusuke Sato, Ken Sato, Shuya Fukai Sakurako Goto-Ito, Nobukatsu Morooka, Atsushi Yamagata, Yusuke Sato, Ken Sato, Shuya Fukai Sakurako Goto-Ito, Nobukatsu Morooka, Atsushi Yamagata, Yusuke Sato, Ken Sato, Shuya Fukai Structural basis of guanine nucleotide exchange for Rab11 by SH3BP5. Structural basis of guanine nucleotide exchange for Rab11 by SH3BP5. Structural basis of guanine nucleotide exchange for Rab11 by SH3BP5. Life science alliance, 2, 2 Life science alliance, 2, 2 Life science alliance, 2, 2 2019/04 英語 公開
Atsushi Yamagata, Shuya Fukai Atsushi Yamagata, Shuya Fukai Atsushi Yamagata, Shuya Fukai Structural insights into leucine-rich repeat-containing synaptic cleft molecules. Structural insights into leucine-rich repeat-containing synaptic cleft molecules. Structural insights into leucine-rich repeat-containing synaptic cleft molecules. Current opinion in structural biology, 54, 68-77 Current opinion in structural biology, 54, 68-77 Current opinion in structural biology, 54, 68-77 2019/02 英語 公開
Chang JW, Sato Y, Ogawa T, Arakawa T, Fukai S, Fushinobu S, Masaki H Chang JW, Sato Y, Ogawa T, Arakawa T, Fukai S, Fushinobu S, Masaki H Chang JW, Sato Y, Ogawa T, Arakawa T, Fukai S, Fushinobu S, Masaki H Crystal structure of the central and the C-terminal RNase domains of colicin D implicated its translocation pathway through inner membrane of target cell. Crystal structure of the central and the C-terminal RNase domains of colicin D implicated its translocation pathway through inner membrane of target cell. Crystal structure of the central and the C-terminal RNase domains of colicin D implicated its translocation pathway through inner membrane of target cell. Journal of biochemistry, 164, 5, 329-339 Journal of biochemistry, 164, 5, 329-339 Journal of biochemistry, 164, 5, 329-339 2018/11 公開
Atsushi Yamagata, Sakurako Goto-Ito, Yusuke Sato, Tomoko Shiroshima, Asami Maeda, Masahiko Watanabe, Takashi Saitoh, Katsumi Maenaka, Tohru Terada, Tomoyuki Yoshida, Takeshi Uemura, Shuya Fukai Atsushi Yamagata, Sakurako Goto-Ito, Yusuke Sato, Tomoko Shiroshima, Asami Maeda, Masahiko Watanabe, Takashi Saitoh, Katsumi Maenaka, Tohru Terada, Tomoyuki Yoshida, Takeshi Uemura, Shuya Fukai Atsushi Yamagata, Sakurako Goto-Ito, Yusuke Sato, Tomoko Shiroshima, Asami Maeda, Masahiko Watanabe, Takashi Saitoh, Katsumi Maenaka, Tohru Terada, Tomoyuki Yoshida, Takeshi Uemura, Shuya Fukai Structural insights into modulation and selectivity of transsynaptic neurexin-LRRTM interaction. Structural insights into modulation and selectivity of transsynaptic neurexin-LRRTM interaction. Structural insights into modulation and selectivity of transsynaptic neurexin-LRRTM interaction. Nature communications, 9, 1, 3964-3964 Nature communications, 9, 1, 3964-3964 Nature communications, 9, 1, 3964-3964 2018/09/27 英語 公開
Okatsu K, Sato Y, Yamano K, Matsuda N, Negishi L, Takahashi A, Yamagata A, Goto-Ito S, Mishima M, Ito Y, Oka T, Tanaka K, Fukai S Okatsu K, Sato Y, Yamano K, Matsuda N, Negishi L, Takahashi A, Yamagata A, Goto-Ito S, Mishima M, Ito Y, Oka T, Tanaka K, Fukai S Okatsu K, Sato Y, Yamano K, Matsuda N, Negishi L, Takahashi A, Yamagata A, Goto-Ito S, Mishima M, Ito Y, Oka T, Tanaka K, Fukai S Structural insights into ubiquitin phosphorylation by PINK1. Structural insights into ubiquitin phosphorylation by PINK1. Structural insights into ubiquitin phosphorylation by PINK1. Scientific reports, 8, 1, 10382 Scientific reports, 8, 1, 10382 Scientific reports, 8, 1, 10382 2018/07 公開
Yamagata A, Miyazaki Y, Yokoi N, Shigematsu H, Sato Y, Goto-Ito S, Maeda A, Goto T, Sanbo M, Hirabayashi M, Shirouzu M, Fukata Y, Fukata M, Fukai S Yamagata A, Miyazaki Y, Yokoi N, Shigematsu H, Sato Y, Goto-Ito S, Maeda A, Goto T, Sanbo M, Hirabayashi M, Shirouzu M, Fukata Y, Fukata M, Fukai S Yamagata A, Miyazaki Y, Yokoi N, Shigematsu H, Sato Y, Goto-Ito S, Maeda A, Goto T, Sanbo M, Hirabayashi M, Shirouzu M, Fukata Y, Fukata M, Fukai S Structural basis of epilepsy-related ligand-receptor complex LGI1-ADAM22. Structural basis of epilepsy-related ligand-receptor complex LGI1-ADAM22. Structural basis of epilepsy-related ligand-receptor complex LGI1-ADAM22. Nature communications, 9, 1, 1546 Nature communications, 9, 1, 1546 Nature communications, 9, 1, 1546 2018/04 公開
Takahashi TS, Hirade Y, Toma A, Sato Y, Yamagata A, Goto-Ito S, Tomita A, Nakada S, Fukai S Takahashi TS, Hirade Y, Toma A, Sato Y, Yamagata A, Goto-Ito S, Tomita A, Nakada S, Fukai S Takahashi TS, Hirade Y, Toma A, Sato Y, Yamagata A, Goto-Ito S, Tomita A, Nakada S, Fukai S Structural insights into two distinct binding modules for Lys63-linked polyubiquitin chains in RNF168. Structural insights into two distinct binding modules for Lys63-linked polyubiquitin chains in RNF168. Structural insights into two distinct binding modules for Lys63-linked polyubiquitin chains in RNF168. Nature communications, 9, 1, 170 Nature communications, 9, 1, 170 Nature communications, 9, 1, 170 2018/01 公開
Goto-Ito S, Yamagata A, Sato Y, Uemura T, Shiroshima T, Maeda A, Imai A, Mori H, Yoshida T, Fukai S Goto-Ito S, Yamagata A, Sato Y, Uemura T, Shiroshima T, Maeda A, Imai A, Mori H, Yoshida T, Fukai S Goto-Ito S, Yamagata A, Sato Y, Uemura T, Shiroshima T, Maeda A, Imai A, Mori H, Yoshida T, Fukai S Structural basis of trans-synaptic interactions between PTPδ and SALMs for inducing synapse formation. Structural basis of trans-synaptic interactions between PTPδ and SALMs for inducing synapse formation. Structural basis of trans-synaptic interactions between PTPδ and SALMs for inducing synapse formation. Nature communications, 9, 1, 269 Nature communications, 9, 1, 269 Nature communications, 9, 1, 269 2018/01 公開
Yusuke Sato, Kei Okatsu, Yasushi Saeki, Koji Yamano, Noriyuki Matsuda, Ai Kaiho, Atsushi Yamagata, Sakurako Goto-Ito, Minoru Ishikawa, Yuichi Hashimoto, Keiji Tanaka, Shuya Fukai Yusuke Sato, Kei Okatsu, Yasushi Saeki, Koji Yamano, Noriyuki Matsuda, Ai Kaiho, Atsushi Yamagata, Sakurako Goto-Ito, Minoru Ishikawa, Yuichi Hashimoto, Keiji Tanaka, Shuya Fukai Yusuke Sato, Kei Okatsu, Yasushi Saeki, Koji Yamano, Noriyuki Matsuda, Ai Kaiho, Atsushi Yamagata, Sakurako Goto-Ito, Minoru Ishikawa, Yuichi Hashimoto, Keiji Tanaka, Shuya Fukai Structural basis for specific cleavage of Lys6-linked polyubiquitin chains by USP30. Structural basis for specific cleavage of Lys6-linked polyubiquitin chains by USP30. Structural basis for specific cleavage of Lys6-linked polyubiquitin chains by USP30. Nature structural & molecular biology, 24, 11, 911-919 Nature structural & molecular biology, 24, 11, 911-919 Nature structural & molecular biology, 24, 11, 911-919 2017/11 英語 公開
Shinsuke Niwa, Fumio Nakamura, Yuri Tomabechi, Mari Aoki, Hideki Shigematsu, Takashi Matsumoto, Atsushi Yamagata, Shuya Fukai, Nobutaka Hirokawa, Yoshio Goshima, Mikako Shirouzu, Ryo Nitta Shinsuke Niwa, Fumio Nakamura, Yuri Tomabechi, Mari Aoki, Hideki Shigematsu, Takashi Matsumoto, Atsushi Yamagata, Shuya Fukai, Nobutaka Hirokawa, Yoshio Goshima, Mikako Shirouzu, Ryo Nitta Shinsuke Niwa, Fumio Nakamura, Yuri Tomabechi, Mari Aoki, Hideki Shigematsu, Takashi Matsumoto, Atsushi Yamagata, Shuya Fukai, Nobutaka Hirokawa, Yoshio Goshima, Mikako Shirouzu, Ryo Nitta Structural basis for CRMP2-induced axonal microtubule formation Structural basis for CRMP2-induced axonal microtubule formation Structural basis for CRMP2-induced axonal microtubule formation SCIENTIFIC REPORTS, 7, 1, 10681 SCIENTIFIC REPORTS, 7, 1, 10681 SCIENTIFIC REPORTS, 7, 1, 10681 2017/09 英語 研究論文(学術雑誌) 公開
Goto-Ito S, Yamagata A, Takahashi TS, Sato Y, Fukai S Goto-Ito S, Yamagata A, Takahashi TS, Sato Y, Fukai S Sakurako Goto-Ito, Atsushi Yamagata, Tomio S. Takahashi, Yusuke Sato, Shuya Fukai Structural basis of the interaction between Topoisomerase IIIβ and the TDRD3 auxiliary factor. Structural basis of the interaction between Topoisomerase IIIβ and the TDRD3 auxiliary factor. Structural basis of the interaction between Topoisomerase III beta and the TDRD3 auxiliary factor Scientific reports, 7, 42123 Scientific reports, 7, 42123 SCIENTIFIC REPORTS, 7, 42123 2017/02 英語 研究論文(学術雑誌) 公開
Jianxing Chen, Atsushi Yamagata, Keiko Kubota, Yusuke Sato, Sakurako Goto-Ito, Shuya Fukai Jianxing Chen, Atsushi Yamagata, Keiko Kubota, Yusuke Sato, Sakurako Goto-Ito, Shuya Fukai Jianxing Chen, Atsushi Yamagata, Keiko Kubota, Yusuke Sato, Sakurako Goto-Ito, Shuya Fukai Crystal structure of Sec10, a subunit of the exocyst complex Crystal structure of Sec10, a subunit of the exocyst complex Crystal structure of Sec10, a subunit of the exocyst complex SCIENTIFIC REPORTS, 7, 40909 SCIENTIFIC REPORTS, 7, 40909 SCIENTIFIC REPORTS, 7, 40909 2017/01 英語 研究論文(学術雑誌) 公開
Shunsuke Kimura, Masami Yamashita, Megumi Yamakami-Kimura, Yusuke Sato, Atsushi Yamagata, Yoshihiro Kobashigawa, Fuyuhiko Inagaki, Takako Amada, Koji Hase, Toshihiko Iwanaga, Hiroshi Ohno, Shuya Fukai Shunsuke Kimura, Masami Yamashita, Megumi Yamakami-Kimura, Yusuke Sato, Atsushi Yamagata, Yoshihiro Kobashigawa, Fuyuhiko Inagaki, Takako Amada, Koji Hase, Toshihiko Iwanaga, Hiroshi Ohno, Shuya Fukai Shunsuke Kimura, Masami Yamashita, Megumi Yamakami-Kimura, Yusuke Sato, Atsushi Yamagata, Yoshihiro Kobashigawa, Fuyuhiko Inagaki, Takako Amada, Koji Hase, Toshihiko Iwanaga, Hiroshi Ohno, Shuya Fukai Distinct Roles for the N- and C-terminal Regions of M-Sec in Plasma Membrane Deformation during Tunneling Nanotube Formation Distinct Roles for the N- and C-terminal Regions of M-Sec in Plasma Membrane Deformation during Tunneling Nanotube Formation Distinct Roles for the N- and C-terminal Regions of M-Sec in Plasma Membrane Deformation during Tunneling Nanotube Formation SCIENTIFIC REPORTS, 6, 33548 SCIENTIFIC REPORTS, 6, 33548 SCIENTIFIC REPORTS, 6, 33548 2016/09 英語 研究論文(学術雑誌) 公開
Yamagata A, Sato Y, Goto-Ito S, Uemura T, Maeda A, Shiroshima T, Yoshida T, Fukai S Yamagata A, Sato Y, Goto-Ito S, Uemura T, Maeda A, Shiroshima T, Yoshida T, Fukai S Yamagata A, Sato Y, Goto-Ito S, Uemura T, Maeda A, Shiroshima T, Yoshida T, Fukai S Structure of Slitrk2-PTPδ complex reveals mechanisms for splicing-dependent trans-synaptic adhesion. Structure of Slitrk2-PTPδ complex reveals mechanisms for splicing-dependent trans-synaptic adhesion. Structure of Slitrk2-PTPδ complex reveals mechanisms for splicing-dependent trans-synaptic adhesion. Scientific reports, 5, 9686 Scientific reports, 5, 9686 Scientific reports, 5, 9686 2015/05 公開
Yamagata A, Yoshida T, Sato Y, Goto-Ito S, Uemura T, Maeda A, Shiroshima T, Iwasawa-Okamoto S, Mori H, Mishina M, Fukai S Yamagata A, Yoshida T, Sato Y, Goto-Ito S, Uemura T, Maeda A, Shiroshima T, Iwasawa-Okamoto S, Mori H, Mishina M, Fukai S Yamagata A, Yoshida T, Sato Y, Goto-Ito S, Uemura T, Maeda A, Shiroshima T, Iwasawa-Okamoto S, Mori H, Mishina M, Fukai S Mechanisms of splicing-dependent trans-synaptic adhesion by PTPδ-IL1RAPL1/IL-1RAcP for synaptic differentiation. Mechanisms of splicing-dependent trans-synaptic adhesion by PTPδ-IL1RAPL1/IL-1RAcP for synaptic differentiation. Mechanisms of splicing-dependent trans-synaptic adhesion by PTPδ-IL1RAPL1/IL-1RAcP for synaptic differentiation. Nature communications, 6, 6926 Nature communications, 6, 6926 Nature communications, 6, 6926 2015/04 公開
Sato Y, Goto E, Shibata Y, Kubota Y, Yamagata A, Goto-Ito S, Kubota K, Inoue J, Takekawa M, Tokunaga F, Fukai S Sato Y, Goto E, Shibata Y, Kubota Y, Yamagata A, Goto-Ito S, Kubota K, Inoue J, Takekawa M, Tokunaga F, Fukai S Sato Y, Goto E, Shibata Y, Kubota Y, Yamagata A, Goto-Ito S, Kubota K, Inoue J, Takekawa M, Tokunaga F, Fukai S Structures of CYLD USP with Met1- or Lys63-linked diubiquitin reveal mechanisms for dual specificity. Structures of CYLD USP with Met1- or Lys63-linked diubiquitin reveal mechanisms for dual specificity. Structures of CYLD USP with Met1- or Lys63-linked diubiquitin reveal mechanisms for dual specificity. Nature structural & molecular biology, 22, 3, 222-229 Nature structural & molecular biology, 22, 3, 222-229 Nature structural & molecular biology, 22, 3, 222-229 2015/03 公開
Toma A, Takahashi TS, Sato Y, Yamagata A, Goto-Ito S, Nakada S, Fukuto A, Horikoshi Y, Tashiro S, Fukai S Toma A, Takahashi TS, Sato Y, Yamagata A, Goto-Ito S, Nakada S, Fukuto A, Horikoshi Y, Tashiro S, Fukai S Toma A, Takahashi TS, Sato Y, Yamagata A, Goto-Ito S, Nakada S, Fukuto A, Horikoshi Y, Tashiro S, Fukai S Structural basis for ubiquitin recognition by ubiquitin-binding zinc finger of FAAP20. Structural basis for ubiquitin recognition by ubiquitin-binding zinc finger of FAAP20. Structural basis for ubiquitin recognition by ubiquitin-binding zinc finger of FAAP20. PloS one, 10, 3, e0120887 PloS one, 10, 3, e0120887 PloS one, 10, 3, e0120887 2015 公開
Chungyong Han, Ai Kawana-Tachikawa, Akihisa Shimizu, Dayong Zhu, Hitomi Nakamura, Eisuke Adachi, Tadashi Kikuchi, Michiko Koga, Tomohiko Koibuchi, George F. Gao, Yusuke Sato, Atsushi Yamagata, Eric Martin, Shuya Fukai, Zabrina L. Brumme, Aikichi Iwamoto Chungyong Han, Ai Kawana-Tachikawa, Akihisa Shimizu, Dayong Zhu, Hitomi Nakamura, Eisuke Adachi, Tadashi Kikuchi, Michiko Koga, Tomohiko Koibuchi, George F. Gao, Yusuke Sato, Atsushi Yamagata, Eric Martin, Shuya Fukai, Zabrina L. Brumme, Aikichi Iwamoto Chungyong Han, Ai Kawana-Tachikawa, Akihisa Shimizu, Dayong Zhu, Hitomi Nakamura, Eisuke Adachi, Tadashi Kikuchi, Michiko Koga, Tomohiko Koibuchi, George F. Gao, Yusuke Sato, Atsushi Yamagata, Eric Martin, Shuya Fukai, Zabrina L. Brumme, Aikichi Iwamoto Switching and emergence of CTL epitopes in HIV-1 infection Switching and emergence of CTL epitopes in HIV-1 infection Switching and emergence of CTL epitopes in HIV-1 infection RETROVIROLOGY, 11, 38 RETROVIROLOGY, 11, 38 RETROVIROLOGY, 11, 38 2014/05 英語 研究論文(学術雑誌) 公開
Shuya Fukai Shuya Fukai Shuya Fukai Core Structures of Ubiquitin Dictate Its Dynamics and Function Core Structures of Ubiquitin Dictate Its Dynamics and Function Core Structures of Ubiquitin Dictate Its Dynamics and Function JOURNAL OF MOLECULAR BIOLOGY, 426, 7, 1367-1369 JOURNAL OF MOLECULAR BIOLOGY, 426, 7, 1367-1369 JOURNAL OF MOLECULAR BIOLOGY, 426, 7, 1367-1369 2014/04 英語 公開
Shimizu A, Kawana-Tachikawa A, Yamagata A, Han C, Zhu D, Sato Y, Nakamura H, Koibuchi T, Carlson J, Martin E, Brumme CJ, Shi Y, Gao GF, Brumme ZL, Fukai S, Iwamoto A Shimizu A, Kawana-Tachikawa A, Yamagata A, Han C, Zhu D, Sato Y, Nakamura H, Koibuchi T, Carlson J, Martin E, Brumme CJ, Shi Y, Gao GF, Brumme ZL, Fukai S, Iwamoto A Shimizu A, Kawana-Tachikawa A, Yamagata A, Han C, Zhu D, Sato Y, Nakamura H, Koibuchi T, Carlson J, Martin E, Brumme CJ, Shi Y, Gao GF, Brumme ZL, Fukai S, Iwamoto A Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection. Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection. Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection. Scientific reports, 3, 3097 Scientific reports, 3, 3097 Scientific reports, 3, 3097 2013/11 公開
Keiko Kubota, Atsushi Yamagata, Yusuke Sato, Sakurako Goto-Ito, Shuya Fukai Keiko Kubota, Atsushi Yamagata, Yusuke Sato, Sakurako Goto-Ito, Shuya Fukai Keiko Kubota, Atsushi Yamagata, Yusuke Sato, Sakurako Goto-Ito, Shuya Fukai Get1 Stabilizes an Open Dimer Conformation of Get3 ATPase by Binding Two Distinct Interfaces Get1 Stabilizes an Open Dimer Conformation of Get3 ATPase by Binding Two Distinct Interfaces Get1 Stabilizes an Open Dimer Conformation of Get3 ATPase by Binding Two Distinct Interfaces JOURNAL OF MOLECULAR BIOLOGY, 422, 3, 366-375 JOURNAL OF MOLECULAR BIOLOGY, 422, 3, 366-375 JOURNAL OF MOLECULAR BIOLOGY, 422, 3, 366-375 2012/09 英語 研究論文(学術雑誌) 公開
Yusuke Sato, Atsushi Yamagata, Sakurako Goto-Ito, Keiko Kubota, Rikako Miyamoto, Shinichiro Nakada, Shuya Fukai Yusuke Sato, Atsushi Yamagata, Sakurako Goto-Ito, Keiko Kubota, Rikako Miyamoto, Shinichiro Nakada, Shuya Fukai Yusuke Sato, Atsushi Yamagata, Sakurako Goto-Ito, Keiko Kubota, Rikako Miyamoto, Shinichiro Nakada, Shuya Fukai Molecular Basis of Lys-63-linked Polyubiquitination Inhibition by the Interaction between Human Deubiquitinating Enzyme OTUB1 and Ubiquitin-conjugating Enzyme UBC13 Molecular Basis of Lys-63-linked Polyubiquitination Inhibition by the Interaction between Human Deubiquitinating Enzyme OTUB1 and Ubiquitin-conjugating Enzyme UBC13 Molecular Basis of Lys-63-linked Polyubiquitination Inhibition by the Interaction between Human Deubiquitinating Enzyme OTUB1 and Ubiquitin-conjugating Enzyme UBC13 JOURNAL OF BIOLOGICAL CHEMISTRY, 287, 31, 25860-25868 JOURNAL OF BIOLOGICAL CHEMISTRY, 287, 31, 25860-25868 JOURNAL OF BIOLOGICAL CHEMISTRY, 287, 31, 25860-25868 2012/07 英語 研究論文(学術雑誌) 公開
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T Tsukazaki, H Mori, S Fukai, T Numata, A Perederina, H Adachi, H Matsumura, K Takano, S Murakami, T Inoue, Y Mori, T Sasaki, DG Vassylyev, O Nureki, K Ito T Tsukazaki, H Mori, S Fukai, T Numata, A Perederina, H Adachi, H Matsumura, K Takano, S Murakami, T Inoue, Y Mori, T Sasaki, DG Vassylyev, O Nureki, K Ito T Tsukazaki, H Mori, S Fukai, T Numata, A Perederina, H Adachi, H Matsumura, K Takano, S Murakami, T Inoue, Y Mori, T Sasaki, DG Vassylyev, O Nureki, K Ito Purification, crystallization and preliminary X-ray diffraction of SecDF, a translocon-associated membrane protein, from Thermus thermophilus Purification, crystallization and preliminary X-ray diffraction of SecDF, a translocon-associated membrane protein, from Thermus thermophilus Purification, crystallization and preliminary X-ray diffraction of SecDF, a translocon-associated membrane protein, from Thermus thermophilus ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS, 62, Pt 4, 376-380 ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS, 62, Pt 4, 376-380 ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS, 62, Pt 4, 376-380 2006/04 英語 研究論文(学術雑誌) 公開
Numata T, Fukai S, Ikeuchi Y, Suzuki T, Nureki O Numata T, Fukai S, Ikeuchi Y, Suzuki T, Nureki O Numata T, Fukai S, Ikeuchi Y, Suzuki T, Nureki O Structural basis for sulfur relay to RNA mediated by heterohexameric TusBCD complex. Structural basis for sulfur relay to RNA mediated by heterohexameric TusBCD complex. Structural basis for sulfur relay to RNA mediated by heterohexameric TusBCD complex. Structure (London, England : 1993), 14, 2, 357-366 Structure (London, England : 1993), 14, 2, 357-366 Structure (London, England : 1993), 14, 2, 357-366 2006/02 公開
K Nakanishi, Y Ogiso, T Nakama, S Fukai, O Nureki K Nakanishi, Y Ogiso, T Nakama, S Fukai, O Nureki K Nakanishi, Y Ogiso, T Nakama, S Fukai, O Nureki Structural basis for anticodon recognition by methionyl-tRNA synthetase Structural basis for anticodon recognition by methionyl-tRNA synthetase Structural basis for anticodon recognition by methionyl-tRNA synthetase NATURE STRUCTURAL & MOLECULAR BIOLOGY, 12, 10, 931-932 NATURE STRUCTURAL & MOLECULAR BIOLOGY, 12, 10, 931-932 NATURE STRUCTURAL & MOLECULAR BIOLOGY, 12, 10, 931-932 2005/10 英語 研究論文(学術雑誌) 公開
K Nakanishi, S Fukai, Y Ikeuchi, A Soma, Y Sekine, T Suzuki, O Nureki K Nakanishi, S Fukai, Y Ikeuchi, A Soma, Y Sekine, T Suzuki, O Nureki K Nakanishi, S Fukai, Y Ikeuchi, A Soma, Y Sekine, T Suzuki, O Nureki Structural basis for lysidine formation by ATP pyrophosphatase accompanied by a lysine-specific loop and a tRNA-recognition domain Structural basis for lysidine formation by ATP pyrophosphatase accompanied by a lysine-specific loop and a tRNA-recognition domain Structural basis for lysidine formation by ATP pyrophosphatase accompanied by a lysine-specific loop and a tRNA-recognition domain PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 102, 21, 7487-7492 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 102, 21, 7487-7492 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 102, 21, 7487-7492 2005/05 英語 研究論文(学術雑誌) 公開
K Watanabe, O Nureki, S Fukai, R Ishii, H Okamoto, S Yokoyama, Y Endo, H Hori K Watanabe, O Nureki, S Fukai, R Ishii, H Okamoto, S Yokoyama, Y Endo, H Hori K Watanabe, O Nureki, S Fukai, R Ishii, H Okamoto, S Yokoyama, Y Endo, H Hori Roles of conserved amino acid sequence motifs in the SpoU (TrmH) RNA methyltransferase family Roles of conserved amino acid sequence motifs in the SpoU (TrmH) RNA methyltransferase family Roles of conserved amino acid sequence motifs in the SpoU (TrmH) RNA methyltransferase family JOURNAL OF BIOLOGICAL CHEMISTRY, 280, 11, 10368-10377 JOURNAL OF BIOLOGICAL CHEMISTRY, 280, 11, 10368-10377 JOURNAL OF BIOLOGICAL CHEMISTRY, 280, 11, 10368-10377 2005/03 英語 研究論文(学術雑誌) 公開
K Tomita, S Fukai, R Ishitani, T Ueda, N Takeuchi, DG Vassylyev, O Nureki K Tomita, S Fukai, R Ishitani, T Ueda, N Takeuchi, DG Vassylyev, O Nureki K Tomita, S Fukai, R Ishitani, T Ueda, N Takeuchi, DG Vassylyev, O Nureki Structural basis for template-independent RNA polymerization Structural basis for template-independent RNA polymerization Structural basis for template-independent RNA polymerization NATURE, 430, 7000, 700-704 NATURE, 430, 7000, 700-704 NATURE, 430, 7000, 700-704 2004/08 英語 研究論文(学術雑誌) 公開
O Nureki, K Watanabe, S Fukai, R Ishii, Y Endo, H Hori, S Yokoyama O Nureki, K Watanabe, S Fukai, R Ishii, Y Endo, H Hori, S Yokoyama O Nureki, K Watanabe, S Fukai, R Ishii, Y Endo, H Hori, S Yokoyama Deep knot structure for construction of active site and cofactor binding site of tRNA modification enzyme Deep knot structure for construction of active site and cofactor binding site of tRNA modification enzyme Deep knot structure for construction of active site and cofactor binding site of tRNA modification enzyme STRUCTURE, 12, 4, 593-602 STRUCTURE, 12, 4, 593-602 STRUCTURE, 12, 4, 593-602 2004/04 英語 研究論文(学術雑誌) 公開
R Fukunaga, S Fukai, R Ishitani, O Nureki, S Yokoyama R Fukunaga, S Fukai, R Ishitani, O Nureki, S Yokoyama R Fukunaga, S Fukai, R Ishitani, O Nureki, S Yokoyama Crystal structures of the CP1 domain from Thermus thermophilus isoleucyl-tRNA synthetase and its complex with L-valine Crystal structures of the CP1 domain from Thermus thermophilus isoleucyl-tRNA synthetase and its complex with L-valine Crystal structures of the CP1 domain from Thermus thermophilus isoleucyl-tRNA synthetase and its complex with L-valine JOURNAL OF BIOLOGICAL CHEMISTRY, 279, 9, 8396-8402 JOURNAL OF BIOLOGICAL CHEMISTRY, 279, 9, 8396-8402 JOURNAL OF BIOLOGICAL CHEMISTRY, 279, 9, 8396-8402 2004/02 英語 研究論文(学術雑誌) 公開
Kise Y, Lee SW, Park SG, Fukai S, Sengoku T, Ishii R, Yokoyama S, Kim S, Nureki O Kise Y, Lee SW, Park SG, Fukai S, Sengoku T, Ishii R, Yokoyama S, Kim S, Nureki O Kise Y, Lee SW, Park SG, Fukai S, Sengoku T, Ishii R, Yokoyama S, Kim S, Nureki O A short peptide insertion crucial for angiostatic activity of human tryptophanyl-tRNA synthetase. A short peptide insertion crucial for angiostatic activity of human tryptophanyl-tRNA synthetase. A short peptide insertion crucial for angiostatic activity of human tryptophanyl-tRNA synthetase. Nature structural & molecular biology, 11, 2, 149-156 Nature structural & molecular biology, 11, 2, 149-156 Nature structural & molecular biology, 11, 2, 149-156 2004/02 公開
S Fukai, HT Matern, Jagath, JR, RH Scheller, AT Brunger S Fukai, HT Matern, Jagath, JR, RH Scheller, AT Brunger S Fukai, HT Matern, Jagath, JR, RH Scheller, AT Brunger Structural basis of the interaction between RalA and Sec5, a subunit of the sec6/8 complex Structural basis of the interaction between RalA and Sec5, a subunit of the sec6/8 complex Structural basis of the interaction between RalA and Sec5, a subunit of the sec6/8 complex EMBO JOURNAL, 22, 13, 3267-3278 EMBO JOURNAL, 22, 13, 3267-3278 EMBO JOURNAL, 22, 13, 3267-3278 2003/07 英語 研究論文(学術雑誌) 公開
S Fukai, O Nureki, S Sekine, A Shimada, DG Vassylyev, S Yokoyama S Fukai, O Nureki, S Sekine, A Shimada, DG Vassylyev, S Yokoyama S Fukai, O Nureki, S Sekine, A Shimada, DG Vassylyev, S Yokoyama Mechanism of molecular interactions for tRNA(Val) recognition by valyl-tRNA synthetase Mechanism of molecular interactions for tRNA(Val) recognition by valyl-tRNA synthetase Mechanism of molecular interactions for tRNA(Val) recognition by valyl-tRNA synthetase RNA-A PUBLICATION OF THE RNA SOCIETY, 9, 1, 100-111 RNA-A PUBLICATION OF THE RNA SOCIETY, 9, 1, 100-111 RNA-A PUBLICATION OF THE RNA SOCIETY, 9, 1, 100-111 2003/01 英語 研究論文(学術雑誌) 公開
H Ogiso, R Ishitani, O Nureki, S Fukai, M Yamanaka, JH Kim, K Saito, A Sakamoto, M Inoue, M Shirouzu, S Yokoyama H Ogiso, R Ishitani, O Nureki, S Fukai, M Yamanaka, JH Kim, K Saito, A Sakamoto, M Inoue, M Shirouzu, S Yokoyama H Ogiso, R Ishitani, O Nureki, S Fukai, M Yamanaka, JH Kim, K Saito, A Sakamoto, M Inoue, M Shirouzu, S Yokoyama Crystal structure of the complex of human epidermal growth factor and receptor extracellular domains Crystal structure of the complex of human epidermal growth factor and receptor extracellular domains Crystal structure of the complex of human epidermal growth factor and receptor extracellular domains CELL, 110, 6, 775-787 CELL, 110, 6, 775-787 CELL, 110, 6, 775-787 2002/09 英語 研究論文(学術雑誌) 公開
W Kagawa, H Kurumizaka, R Ishitani, S Fukai, O Nureki, T Shibata, S Yokoyama W Kagawa, H Kurumizaka, R Ishitani, S Fukai, O Nureki, T Shibata, S Yokoyama W Kagawa, H Kurumizaka, R Ishitani, S Fukai, O Nureki, T Shibata, S Yokoyama Crystal structure of the homologous-pairing domain from the human Rad52 recombinase in the undecameric form Crystal structure of the homologous-pairing domain from the human Rad52 recombinase in the undecameric form Crystal structure of the homologous-pairing domain from the human Rad52 recombinase in the undecameric form MOLECULAR CELL, 10, 2, 359-371 MOLECULAR CELL, 10, 2, 359-371 MOLECULAR CELL, 10, 2, 359-371 2002/08 英語 研究論文(学術雑誌) 公開
R Ishitani, O Nureki, S Fukai, T Kijimoto, N Nameki, M Watanabe, H Kondo, M Sekine, N Okada, S Nishimura, S Yokoyama R Ishitani, O Nureki, S Fukai, T Kijimoto, N Nameki, M Watanabe, H Kondo, M Sekine, N Okada, S Nishimura, S Yokoyama R Ishitani, O Nureki, S Fukai, T Kijimoto, N Nameki, M Watanabe, H Kondo, M Sekine, N Okada, S Nishimura, S Yokoyama Crystal structure of archaeosine tRNA-guanine transglycosylase Crystal structure of archaeosine tRNA-guanine transglycosylase Crystal structure of archaeosine tRNA-guanine transglycosylase JOURNAL OF MOLECULAR BIOLOGY, 318, 3, 665-677 JOURNAL OF MOLECULAR BIOLOGY, 318, 3, 665-677 JOURNAL OF MOLECULAR BIOLOGY, 318, 3, 665-677 2002/05 英語 研究論文(学術雑誌) 公開
TL Hendrickson, TK Nomanbhoy, de Crecy-Lagard, V, S Fukai, O Nureki, S Yokoyama, P Schimmel TL Hendrickson, TK Nomanbhoy, de Crecy-Lagard, V, S Fukai, O Nureki, S Yokoyama, P Schimmel TL Hendrickson, TK Nomanbhoy, de Crecy-Lagard, V, S Fukai, O Nureki, S Yokoyama, P Schimmel Mutational separation of two pathways for editing by a class I tRNA synthetase Mutational separation of two pathways for editing by a class I tRNA synthetase Mutational separation of two pathways for editing by a class I tRNA synthetase MOLECULAR CELL, 9, 2, 353-362 MOLECULAR CELL, 9, 2, 353-362 MOLECULAR CELL, 9, 2, 353-362 2002/02 英語 研究論文(学術雑誌) 公開
Tanaka Y, Nureki O, Kurumizaka H, Fukai S, Kawaguchi S, Ikuta M, Iwahara J, Okazaki T, Yokoyama S Tanaka Y, Nureki O, Kurumizaka H, Fukai S, Kawaguchi S, Ikuta M, Iwahara J, Okazaki T, Yokoyama S Tanaka Y, Nureki O, Kurumizaka H, Fukai S, Kawaguchi S, Ikuta M, Iwahara J, Okazaki T, Yokoyama S Crystal structure of the CENP-B protein-DNA complex: the DNA-binding domains of CENP-B induce kinks in the CENP-B box DNA. Crystal structure of the CENP-B protein-DNA complex: the DNA-binding domains of CENP-B induce kinks in the CENP-B box DNA. Crystal structure of the CENP-B protein-DNA complex: the DNA-binding domains of CENP-B induce kinks in the CENP-B box DNA. EMBO J., 20, 23, 6612-6618 EMBO J., 20, 23, 6612-6618 EMBO J., 20, 23, 6612-6618 2001/12 英語 研究論文(学術雑誌) 公開
Kurimoto K, Fukai S, Nureki O, Muto Y, Yokoyama S Kurimoto K, Fukai S, Nureki O, Muto Y, Yokoyama S Kurimoto K, Fukai S, Nureki O, Muto Y, Yokoyama S Crystal structure of human AUH protein, a single-stranded RNA binding homolog of enoyl-CoA hydratase. Crystal structure of human AUH protein, a single-stranded RNA binding homolog of enoyl-CoA hydratase. Crystal structure of human AUH protein, a single-stranded RNA binding homolog of enoyl-CoA hydratase. Structure, 9, 12, 1253-1263 Structure, 9, 12, 1253-1263 Structure, 9, 12, 1253-1263 2001/12 英語 研究論文(学術雑誌) 公開
S Fukai, O Nureki, S Sekine, A Shimada, JS Tao, DG Vassylyev, S Yokoyama S Fukai, O Nureki, S Sekine, A Shimada, JS Tao, DG Vassylyev, S Yokoyama S Fukai, O Nureki, S Sekine, A Shimada, JS Tao, DG Vassylyev, S Yokoyama Structural basis for double-sieve discrimination of L-valine from L-isoleucine and L-threonine by the complex of tRNA(Val) and valyl-tRNA synthetase Structural basis for double-sieve discrimination of L-valine from L-isoleucine and L-threonine by the complex of tRNA(Val) and valyl-tRNA synthetase Structural basis for double-sieve discrimination of L-valine from L-isoleucine and L-threonine by the complex of tRNA(Val) and valyl-tRNA synthetase CELL, 103, 5, 793-803 CELL, 103, 5, 793-803 CELL, 103, 5, 793-803 2000/11 英語 研究論文(学術雑誌) 公開
O Nureki, DG Vassylyev, M Tateno, A Shimada, T Nakama, S Fukai, M Konno, TL Hendrickson, P Schimmel, S Yokoyama O Nureki, DG Vassylyev, M Tateno, A Shimada, T Nakama, S Fukai, M Konno, TL Hendrickson, P Schimmel, S Yokoyama O Nureki, DG Vassylyev, M Tateno, A Shimada, T Nakama, S Fukai, M Konno, TL Hendrickson, P Schimmel, S Yokoyama Enzyme structure with two catalytic sites for double-sieve selection of substrate Enzyme structure with two catalytic sites for double-sieve selection of substrate Enzyme structure with two catalytic sites for double-sieve selection of substrate SCIENCE, 280, 5363, 578-582 SCIENCE, 280, 5363, 578-582 SCIENCE, 280, 5363, 578-582 1998/04 英語 研究論文(学術雑誌) 公開

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佐藤 裕介, 尾勝 圭, 佐伯 泰, 山野 晃史, 松田 憲之, 海保 愛, 山形 敦史, 伊藤 桜子, 石川 稔, 橋本 祐一, 田中 啓二, 深井 周也 佐藤 裕介, 尾勝 圭, 佐伯 泰, 山野 晃史, 松田 憲之, 海保 愛, 山形 敦史, 伊藤 桜子, 石川 稔, 橋本 祐一, 田中 啓二, 深井 周也 佐藤 裕介, 尾勝 圭, 佐伯 泰, 山野 晃史, 松田 憲之, 海保 愛, 山形 敦史, 伊藤 桜子, 石川 稔, 橋本 祐一, 田中 啓二, 深井 周也 ユビキチン・コード:細胞内の最も難解な暗号を読む USP30によるLys6結合型ユビキチン鎖特異的切断機構の構造的基盤 ユビキチン・コード:細胞内の最も難解な暗号を読む USP30によるLys6結合型ユビキチン鎖特異的切断機構の構造的基盤 ユビキチン・コード:細胞内の最も難解な暗号を読む USP30によるLys6結合型ユビキチン鎖特異的切断機構の構造的基盤 生命科学系学会合同年次大会, 2017年度, [4AW13-6] 生命科学系学会合同年次大会, 2017年度, [4AW13-6] 生命科学系学会合同年次大会, 2017年度, [4AW13-6] 2017/12 日本語 公開
吉田 知之, 山形 敦史, 田端 彩子, 和泉 宏謙, 城島 知子, 金 主賢, 深田 優子, 深田 正紀, 高雄 啓三, 森 寿, 深井 周也 吉田 知之, 山形 敦史, 田端 彩子, 和泉 宏謙, 城島 知子, 金 主賢, 深田 優子, 深田 正紀, 高雄 啓三, 森 寿, 深井 周也 吉田 知之, 山形 敦史, 田端 彩子, 和泉 宏謙, 城島 知子, 金 主賢, 深田 優子, 深田 正紀, 高雄 啓三, 森 寿, 深井 周也 遺伝子点変異による精神神経疾患の発症機構解明 シナプスオーガナイザー遺伝子点変異導入マウスを用いた神経発達障害発症機構の解明 遺伝子点変異による精神神経疾患の発症機構解明 シナプスオーガナイザー遺伝子点変異導入マウスを用いた神経発達障害発症機構の解明 遺伝子点変異による精神神経疾患の発症機構解明 シナプスオーガナイザー遺伝子点変異導入マウスを用いた神経発達障害発症機構の解明 日本生物学的精神医学会・日本神経精神薬理学会合同年会プログラム・抄録集, 39回・47回, 82-82 日本生物学的精神医学会・日本神経精神薬理学会合同年会プログラム・抄録集, 39回・47回, 82-82 日本生物学的精神医学会・日本神経精神薬理学会合同年会プログラム・抄録集, 39回・47回, 82-82 2017/09 日本語 公開
深井周也, 山形敦史 深井周也, 山形敦史 中枢シナプス形成を誘導するシナプスオーガナイザー複合体の構造基盤 中枢シナプス形成を誘導するシナプスオーガナイザー複合体の構造基盤 生化学, 88, 391-396 生化学, 88, 391-396 , 88, 391-396 2016/06 日本語 総説・解説(学術雑誌) 公開
Fukai S, Yamagata A Fukai S, Yamagata A Fukai S, Yamagata A [Structural basis of synaptic organizer complexes for inducing synapse formation in the central nervous system]. [Structural basis of synaptic organizer complexes for inducing synapse formation in the central nervous system]. [Structural basis of synaptic organizer complexes for inducing synapse formation in the central nervous system]. Seikagaku. The Journal of Japanese Biochemical Society, 88, 3, 391-396 Seikagaku. The Journal of Japanese Biochemical Society, 88, 3, 391-396 Seikagaku. The Journal of Japanese Biochemical Society, 88, 3, 391-396 2016/06 公開
山形敦史, 深井周也 山形敦史, 深井周也 神経細胞間シナプス形成とその調節メカニズム 神経細胞間シナプス形成とその調節メカニズム 日本結晶学会誌, 57, 304-309 日本結晶学会誌, 57, 304-309 , 57, 304-309 2015/10 公開
深井周也, 植村 健, 吉田知之 深井周也, 植村 健, 吉田知之 シナプス形成を誘導する膜受容体の機能と構造 シナプス形成を誘導する膜受容体の機能と構造 実験医学 増刊, 32, 92-97 実験医学 増刊, 32, 92-97 , 32, 92-97 2014 公開
Sato Y, Fukai S Sato Y, Fukai S Sato Y, Fukai S [The regulation of cell function by linkage-specific polyubiquitin binding]. [The regulation of cell function by linkage-specific polyubiquitin binding]. [The regulation of cell function by linkage-specific polyubiquitin binding]. Seikagaku. The Journal of Japanese Biochemical Society, 84, 9, 776-780 Seikagaku. The Journal of Japanese Biochemical Society, 84, 9, 776-780 Seikagaku. The Journal of Japanese Biochemical Society, 84, 9, 776-780 2012/09 公開
塚崎智也, 森博幸, 越前友香, 石谷隆一郎, 深井周也, PEREDERINA Anna, VASSYLYEV, Dmitry G, 田中剛史, 河野俊之, 伊藤維昭, 濡木理 塚崎智也, 森博幸, 越前友香, 石谷隆一郎, 深井周也, PEREDERINA Anna, VASSYLYEV, Dmitry G, 田中剛史, 河野俊之, 伊藤維昭, 濡木理 塚崎智也, 森博幸, 越前友香, 石谷隆一郎, 深井周也, PEREDERINA Anna, VASSYLYEV, Dmitry G, 田中剛史, 河野俊之, 伊藤維昭, 濡木理 Secトランスロコンと共に機能するSecDF膜蛋白質の結晶構造 Secトランスロコンと共に機能するSecDF膜蛋白質の結晶構造 Secトランスロコンと共に機能するSecDF膜蛋白質の結晶構造 日本蛋白質科学会年会プログラム・要旨集, 10th, 154 日本蛋白質科学会年会プログラム・要旨集, 10th, 154 日本蛋白質科学会年会プログラム・要旨集, 10th, 154 2010/05/15 日本語 公開
Tsukazaki T, Mori H, Echizen Y, Ishitani R, Fukai S, Tanaka T, Perederina A, Vassylyev D G, Kohno H, Echizen Y, Ishitani R, Fukai S, Tanaka T, Perederina A, Vassylyev D G, Kohno T, Ito K, Nureki O Tsukazaki T, Mori H, Echizen Y, Ishitani R, Fukai S, Tanaka T, Perederina A, Vassylyev D G, Kohno H, Echizen Y, Ishitani R, Fukai S, Tanaka T, Perederina A, Vassylyev D G, Kohno T, Ito K, Nureki O Tsukazaki T, Mori H, Echizen Y, Ishitani R, Fukai S, Tanaka T, Perederina A, Vassylyev D G, Kohno H, Echizen Y, Ishitani R, Fukai S, Tanaka T, Perederina A, Vassylyev D G, Kohno T, Ito K, Nureki O Crystal structure of SecDF, a Sec translocon-associated membrane protein. Crystal structure of SecDF, a Sec translocon-associated membrane protein. Crystal structure of SecDF, a Sec translocon-associated membrane protein. The 3rd International Symposium on Protein Community, Nara, September 13-16, 2010 The 3rd International Symposium on Protein Community, Nara, September 13-16, 2010 The 3rd International Symposium on Protein Community, Nara, September 13-16, 2010 2010 英語 公開
Fukai S Fukai S Fukai S [Mechanism for de-ubiquitination of K 63-linked polyubiquitin chains]. [Mechanism for de-ubiquitination of K 63-linked polyubiquitin chains]. [Mechanism for de-ubiquitination of K 63-linked polyubiquitin chains]. Seikagaku. The Journal of Japanese Biochemical Society, 81, 9, 815-819 Seikagaku. The Journal of Japanese Biochemical Society, 81, 9, 815-819 Seikagaku. The Journal of Japanese Biochemical Society, 81, 9, 815-819 2009/09 公開
塚崎智也, 森博幸, 深井周也, 石谷隆一郎, 森貴治, 堂前直, PEREDERINA Anna, 杉田有治, VASSYLYEV, Dmitry G, 伊藤維昭, 濡木理 塚崎智也, 森博幸, 深井周也, 石谷隆一郎, 森貴治, 堂前直, PEREDERINA Anna, 杉田有治, VASSYLYEV, Dmitry G, 伊藤維昭, 濡木理 塚崎智也, 森博幸, 深井周也, 石谷隆一郎, 森貴治, 堂前直, PEREDERINA Anna, 杉田有治, VASSYLYEV, Dmitry G, 伊藤維昭, 濡木理 細菌型Secトランスロコンの構造から明らかとなったタンパク質膜透過装置の構造変化 細菌型Secトランスロコンの構造から明らかとなったタンパク質膜透過装置の構造変化 細菌型Secトランスロコンの構造から明らかとなったタンパク質膜透過装置の構造変化 日本蛋白質科学会年会プログラム・要旨集, 9th, 18 日本蛋白質科学会年会プログラム・要旨集, 9th, 18 日本蛋白質科学会年会プログラム・要旨集, 9th, 18 2009/04/24 日本語 公開
Tsukazaki T, Mori H, Fukai S, Ishitani R, Mori T, Dohmae N, Perederina A, Sugita Y, Vassylyev D. G, Ito K, Nureki O Tsukazaki T, Mori H, Fukai S, Ishitani R, Mori T, Dohmae N, Perederina A, Sugita Y, Vassylyev D. G, Ito K, Nureki O Tsukazaki T, Mori H, Fukai S, Ishitani R, Mori T, Dohmae N, Perederina A, Sugita Y, Vassylyev D. G, Ito K, Nureki O Crystal structure of T. thermophilus Sec translocon with an Fab fragment implies a translocation-initiating state of SecY. Crystal structure of T. thermophilus Sec translocon with an Fab fragment implies a translocation-initiating state of SecY. Crystal structure of T. thermophilus Sec translocon with an Fab fragment implies a translocation-initiating state of SecY. シンポジウム 「タンパク機発現システム - シャペロンからトランスロケーターまで」 第 回日本分子生物学会年会、第 回日本生化学会大会 合同大会 神戸 2008 年12月9-12 日 シンポジウム 「タンパク機発現システム - シャペロンからトランスロケーターまで」 第 回日本分子生物学会年会、第 回日本生化学会大会 合同大会 神戸 2008 年12月9-12 日 シンポジウム 「タンパク機発現システム - シャペロンからトランスロケーターまで」 第 回日本分子生物学会年会、第 回日本生化学会大会 合同大会 神戸 2008 年12月9-12 日 2008 英語 公開
Tsukazaki, T, Mori, H, Fukai, S, Ishitani, R, Perederina, A, Vassylyev, D. G, Ito, K, Nureki Tsukazaki, T, Mori, H, Fukai, S, Ishitani, R, Perederina, A, Vassylyev, D. G, Ito, K, Nureki 細菌型Sec トランスロコン腹合体の結晶構析 細菌型Sec トランスロコン腹合体の結晶構析 第46 回日本生物物理学会、福岡、2008 年12 月 3-5 日 第46 回日本生物物理学会、福岡、2008 年12 月 3-5 日 2008 日本語 公開
沼田 倫征, 中西 孝太郎, 鈴木 陽子, 野間 あきこ, 池内 与志徳, 鈴木 勉, 深井 周也, 石谷 隆一郎, 濡木 理 沼田 倫征, 中西 孝太郎, 鈴木 陽子, 野間 あきこ, 池内 与志徳, 鈴木 勉, 深井 周也, 石谷 隆一郎, 濡木 理 Numata Tomoyuki, Nakanishi Kotaro, Suzuki Yoko, Noma Akiko, Ikeuchi Yoshiho, Suzuki Tsutomu, Fukai Shuya, Ishitani Ryuichiro, Nureki Osamu S06A2 非翻訳RNAの化学修飾の構造基盤(ncRNAのプロセスと機能に関わる構造生物学,シンポジウム,第45回日本生物物理学会年会) S06A2 非翻訳RNAの化学修飾の構造基盤(ncRNAのプロセスと機能に関わる構造生物学,シンポジウム,第45回日本生物物理学会年会) S06A2 Structural insights into the chemical modification in non-coding RNAs(Structural Biology of ncRNA Processing and Function) 生物物理, 47, 1 生物物理, 47, 1 Biophysics, 47, 1 2007/11/20 公開
Fukai S Fukai S Fukai S [Expectation for the cell-free synthesis of the multisubunit complex towards the three-dimensional structure determination]. [Expectation for the cell-free synthesis of the multisubunit complex towards the three-dimensional structure determination]. [Expectation for the cell-free synthesis of the multisubunit complex towards the three-dimensional structure determination]. Seikagaku. The Journal of Japanese Biochemical Society, 79, 3, 272-277 Seikagaku. The Journal of Japanese Biochemical Society, 79, 3, 272-277 Seikagaku. The Journal of Japanese Biochemical Society, 79, 3, 272-277 2007/03 公開
Numata Tomoyuki, Ikeuchi Yoshiho, Fukai Shuya, Suzuki Tsutomu, Nureki Osamu Numata Tomoyuki, Ikeuchi Yoshiho, Fukai Shuya, Suzuki Tsutomu, Nureki Osamu Numata Tomoyuki, Ikeuchi Yoshiho, Fukai Shuya, Suzuki Tsutomu, Nureki Osamu 1P014 Snapshots of tRNA sulfuration via an adenylated intermediate(1. Protein structure and dynamics (I),Poster Session,Abstract,Meeting Program of EABS & BSJ 2006) 1P014 Snapshots of tRNA sulfuration via an adenylated intermediate(1. Protein structure and dynamics (I),Poster Session,Abstract,Meeting Program of EABS & BSJ 2006) 1P014 Snapshots of tRNA sulfuration via an adenylated intermediate(1. Protein structure and dynamics (I),Poster Session,Abstract,Meeting Program of EABS & BSJ 2006) Biophysics, 46, 2 Biophysics, 46, 2 Biophysics, 46, 2 2006/10/01 公開
塚崎智也, 森博幸, 深井周也, 沼田倫征, PEREDERINA Anna, 安達宏昭, 松村浩由, 高野和文, 村上聡, 井上豪, 森勇介, 佐々木孝友, VASSYLYEV, Dmitry G, 濡木理, 伊藤維昭 塚崎智也, 森博幸, 深井周也, 沼田倫征, PEREDERINA Anna, 安達宏昭, 松村浩由, 高野和文, 村上聡, 井上豪, 森勇介, 佐々木孝友, VASSYLYEV, Dmitry G, 濡木理, 伊藤維昭 塚崎智也, 森博幸, 深井周也, 沼田倫征, PEREDERINA Anna, 安達宏昭, 松村浩由, 高野和文, 村上聡, 井上豪, 森勇介, 佐々木孝友, VASSYLYEV, Dmitry G, 濡木理, 伊藤維昭 高度好熱菌由来トランスロコン関連膜タンパク質SecDFの精製・結晶化ならびにX線回折 高度好熱菌由来トランスロコン関連膜タンパク質SecDFの精製・結晶化ならびにX線回折 高度好熱菌由来トランスロコン関連膜タンパク質SecDFの精製・結晶化ならびにX線回折 日本蛋白質科学会年会プログラム・要旨集, 6th, 40 日本蛋白質科学会年会プログラム・要旨集, 6th, 40 日本蛋白質科学会年会プログラム・要旨集, 6th, 40 2006/03/31 日本語 公開
深井 周也, 白川 龍太郎, 堀内 久徳, 大川 克也, 三尾 和弘, 丸山 雄介, 佐藤 主税, 濡木 理 深井 周也, 白川 龍太郎, 堀内 久徳, 大川 克也, 三尾 和弘, 丸山 雄介, 佐藤 主税, 濡木 理 Fukai S, Shirakawa R, Horiuchi H, Mio K, Maruyama Y, Sato C, Nureki O 3P219 立体構造解析に向けたほ乳類Exocyst複合体の調製(細胞生物的課題(接着・運動・骨格・伝達・膜))) 3P219 立体構造解析に向けたほ乳類Exocyst複合体の調製(細胞生物的課題(接着・運動・骨格・伝達・膜))) 3P219 Preparation of the mammalian Exocyst complex for the three-dimensional structure determination 生物物理, 45, 1 生物物理, 45, 1 Biophysics, 45, 1 2005/10/19 日本語 公開
Tsukazaki T, Mori H, Peredrerina A, Vassylyev D. G, Fukai S, Nureki O, Ito K Tsukazaki T, Mori H, Peredrerina A, Vassylyev D. G, Fukai S, Nureki O, Ito K Tsukazaki T, Mori H, Peredrerina A, Vassylyev D. G, Fukai S, Nureki O, Ito K Structural analysis of Thermus thermophilus protein translocation complexes. Structural analysis of Thermus thermophilus protein translocation complexes. Structural analysis of Thermus thermophilus protein translocation complexes. International Symposium on Life of Proteins. Maturation, Translocation and Quality Control in the Cell. 10.30-11.3, Awajisima, Hyogo, Japan, 2005 International Symposium on Life of Proteins. Maturation, Translocation and Quality Control in the Cell. 10.30-11.3, Awajisima, Hyogo, Japan, 2005 International Symposium on Life of Proteins. Maturation, Translocation and Quality Control in the Cell. 10.30-11.3, Awajisima, Hyogo, Japan, 2005 2005 英語 公開
Watanabe K, Nureki O, Fukai S, Endo Y, Hori H Watanabe K, Nureki O, Fukai S, Endo Y, Hori H Watanabe K, Nureki O, Fukai S, Endo Y, Hori H Structural change of tRNA (Gm18) methyltransferase by binding of methyl donor analogues. Structural change of tRNA (Gm18) methyltransferase by binding of methyl donor analogues. Structural change of tRNA (Gm18) methyltransferase by binding of methyl donor analogues. Nucleic acids symposium series (2004), 49, 301-302 Nucleic acids symposium series (2004), 49, 301-302 Nucleic acids symposium series (2004), 49, 301-302 2005 公開
沼田 倫征, 深井 周也, 池内 与志穂, 鈴木 勉, 濡木 理 沼田 倫征, 深井 周也, 池内 与志穂, 鈴木 勉, 濡木 理 Numata N, Fukai S, Ikeuchi Y, Suzuki T, Nureki O 2P059 tRNAのチオ化修飾に関与するTusBCD複合体の結晶構造解析(蛋白質 A) 構造) 2P059 tRNAのチオ化修飾に関与するTusBCD複合体の結晶構造解析(蛋白質 A) 構造) 2P059 Crystallization of the TsuBCD complex 生物物理, 44, 0 生物物理, 44, 0 Seibutsu Butsuri, 44, 0 2004 日本語 公開
中西 孝太郎, 深井 周也, 池内 与志穂, 相馬 亜希子, 鈴木 勉, 濡木 理 中西 孝太郎, 深井 周也, 池内 与志穂, 相馬 亜希子, 鈴木 勉, 濡木 理 Nakanishi K, Fukai S, Ikeuchi Y, Soma A, Suzuki T, Nureki O 2P060 A. aeolicus tRNA^<Ile>2リシジン合成酵素の結晶構造とその反応触媒機構(蛋白質 A) 構造) 2P060 A. aeolicus tRNA^<Ile>2リシジン合成酵素の結晶構造とその反応触媒機構(蛋白質 A) 構造) 2P060 Crystal structure of TilS : implications for reaction mechanism 生物物理, 44, 0 生物物理, 44, 0 Seibutsu Butsuri, 44, 0 2004 日本語 公開
Nureki O, Fukai S, Sekine S, Shimada A, Terada T, Nakama T, Shirouzu M, Vassylyev D. G, Yokoyama S Nureki O, Fukai S, Sekine S, Shimada A, Terada T, Nakama T, Shirouzu M, Vassylyev D. G, Yokoyama S Nureki O, Fukai S, Sekine S, Shimada A, Terada T, Nakama T, Shirouzu M, Vassylyev D. G, Yokoyama S Structural basis for amino acid and tRNA recognition by class I aminoacyl-tRNA synthetases Structural basis for amino acid and tRNA recognition by class I aminoacyl-tRNA synthetases Structural basis for amino acid and tRNA recognition by class I aminoacyl-tRNA synthetases Cold Spring Harb Symp Quant Biol, 66, 167-73 Cold Spring Harb Symp Quant Biol, 66, 167-73 Cold Spring Harb Symp Quant Biol, 66, 167-73 2001 公開

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