飯田 慶

最終更新日時: 2019/06/19 18:12:16

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氏名(漢字/フリガナ/アルファベット表記)
飯田 慶/イイダ ケイ/Iida, Kei
所属部署・職名(部局/所属/講座等/職名)
医学研究科/医学研究支援センター/特定助教
取得学位
学位名(日本語) 学位名(英語) 大学(日本語) 大学(英語) 取得区分
修士(理学) 名古屋大学
博士(理学) 名古屋大学
ORCID ID
https://orcid.org/0000-0001-7130-8705
researchmap URL
https://researchmap.jp/read0118609
論文
著者 著者(日本語) 著者(英語) タイトル タイトル(日本語) タイトル(英語) 書誌情報等 書誌情報等(日本語) 書誌情報等(英語) 出版年月 査読の有無 記述言語 掲載種別 公開
Hosokawa M, Takeuchi A, Tanihata J, Iida K, Takeda S, Hagiwara M. Hosokawa M, Takeuchi A, Tanihata J, Iida K, Takeda S, Hagiwara M. Hosokawa M, Takeuchi A, Tanihata J, Iida K, Takeda S, Hagiwara M. Loss of RNA-Binding Protein Sfpq Causes Long-Gene Transcriptopathy in Skeletal Muscle and Severe Muscle Mass Reduction with Metabolic Myopathy Loss of RNA-Binding Protein Sfpq Causes Long-Gene Transcriptopathy in Skeletal Muscle and Severe Muscle Mass Reduction with Metabolic Myopathy Loss of RNA-Binding Protein Sfpq Causes Long-Gene Transcriptopathy in Skeletal Muscle and Severe Muscle Mass Reduction with Metabolic Myopathy iScience iScience iScience 2019/03 公開
Kimura R, Swarup V, Tomiwa K, Gandal MJ, Parikshak NN, Funabiki Y, Nakata M, Awaya T, Kato T, Iida K, Okazaki S, Matsushima K, Kato T, Murai T, Hagiwara M Kimura R, Swarup V, Tomiwa K, Gandal MJ, Parikshak NN, Funabiki Y, Nakata M, Awaya T, Kato T, Iida K, Okazaki S, Matsushima K, Kato T, Murai T, Hagiwara M Kimura R, Swarup V, Tomiwa K, Gandal MJ, Parikshak NN, Funabiki Y, Nakata M, Awaya T, Kato T, Iida K, Okazaki S, Matsushima K, Kato T, Murai T, Hagiwara M Integrative network analysis reveals biological pathways associated with Williams syndrome. Integrative network analysis reveals biological pathways associated with Williams syndrome. Integrative network analysis reveals biological pathways associated with Williams syndrome. Journal of child psychology and psychiatry, and allied disciplines Journal of child psychology and psychiatry, and allied disciplines Journal of child psychology and psychiatry, and allied disciplines 2018/10 公開
Okano H, Baba M, Hidese R, Iida K, Li T, Kojima K, Takita T, Yanagihara I, Fujiwara S, Yasukawa K Okano H, Baba M, Hidese R, Iida K, Li T, Kojima K, Takita T, Yanagihara I, Fujiwara S, Yasukawa K Okano H, Baba M, Hidese R, Iida K, Li T, Kojima K, Takita T, Yanagihara I, Fujiwara S, Yasukawa K Accurate fidelity analysis of the reverse transcriptase by a modified next-generation sequencing. Accurate fidelity analysis of the reverse transcriptase by a modified next-generation sequencing. Accurate fidelity analysis of the reverse transcriptase by a modified next-generation sequencing. Enzyme and microbial technology, 115, 81-85 Enzyme and microbial technology, 115, 81-85 Enzyme and microbial technology, 115, 81-85 2018/08 公開
Merkurjev D, Hong WT, Iida K, Oomoto I, Goldie BJ, Yamaguti H, Ohara T, Kawaguchi SY, Hirano T, Martin KC, Pellegrini M, Wang DO Merkurjev D, Hong WT, Iida K, Oomoto I, Goldie BJ, Yamaguti H, Ohara T, Kawaguchi SY, Hirano T, Martin KC, Pellegrini M, Wang DO Merkurjev D, Hong WT, Iida K, Oomoto I, Goldie BJ, Yamaguti H, Ohara T, Kawaguchi SY, Hirano T, Martin KC, Pellegrini M, Wang DO Synaptic N6-methyladenosine (m6A) epitranscriptome reveals functional partitioning of localized transcripts. Synaptic N6-methyladenosine (m6A) epitranscriptome reveals functional partitioning of localized transcripts. Synaptic N6-methyladenosine (m6A) epitranscriptome reveals functional partitioning of localized transcripts. Nature neuroscience Nature neuroscience Nature neuroscience 2018/06 公開
Abdelmoez MN, Iida K, Oguchi Y, Nishikii H, Yokokawa R, Kotera H, Uemura S, Santiago JG, Shintaku H Abdelmoez MN, Iida K, Oguchi Y, Nishikii H, Yokokawa R, Kotera H, Uemura S, Santiago JG, Shintaku H Abdelmoez MN, Iida K, Oguchi Y, Nishikii H, Yokokawa R, Kotera H, Uemura S, Santiago JG, Shintaku H SINC-seq: correlation of transient gene expressions between nucleus and cytoplasm reflects single-cell physiology. SINC-seq: correlation of transient gene expressions between nucleus and cytoplasm reflects single-cell physiology. SINC-seq: correlation of transient gene expressions between nucleus and cytoplasm reflects single-cell physiology. Genome biology, 19, 1, 66 Genome biology, 19, 1, 66 Genome biology, 19, 1, 66 2018/06 公開
Takeuchi A, Iida K, Tsubota T, Hosokawa M, Denawa M, Brown JB, Ninomiya K, Ito M, Kimura H, Abe T, Kiyonari H, Ohno K, Hagiwara M Takeuchi A, Iida K, Tsubota T, Hosokawa M, Denawa M, Brown JB, Ninomiya K, Ito M, Kimura H, Abe T, Kiyonari H, Ohno K, Hagiwara M Takeuchi A, Iida K, Tsubota T, Hosokawa M, Denawa M, Brown JB, Ninomiya K, Ito M, Kimura H, Abe T, Kiyonari H, Ohno K, Hagiwara M Loss of Sfpq Causes Long-Gene Transcriptopathy in the Brain. Loss of Sfpq Causes Long-Gene Transcriptopathy in the Brain. Loss of Sfpq Causes Long-Gene Transcriptopathy in the Brain. Cell reports, 23, 5, 1326-1341 Cell reports, 23, 5, 1326-1341 Cell reports, 23, 5, 1326-1341 2018/05 公開
Otsubo T, Yamada K, Hagiwara T, Oshima K, Iida K, Nishikata K, Toyoda T, Igari T, Nohara K, Yamashita S, Hattori M, Dohi T, Kawamura YI Otsubo T, Yamada K, Hagiwara T, Oshima K, Iida K, Nishikata K, Toyoda T, Igari T, Nohara K, Yamashita S, Hattori M, Dohi T, Kawamura YI Otsubo T, Yamada K, Hagiwara T, Oshima K, Iida K, Nishikata K, Toyoda T, Igari T, Nohara K, Yamashita S, Hattori M, Dohi T, Kawamura YI DNA hypermethyation and silencing of <i>PITX1</i> correlated with advanced stage and poor postoperative prognosis of esophageal squamous cell carcinoma. DNA hypermethyation and silencing of <i>PITX1</i> correlated with advanced stage and poor postoperative prognosis of esophageal squamous cell carcinoma. DNA hypermethyation and silencing of <i>PITX1</i> correlated with advanced stage and poor postoperative prognosis of esophageal squamous cell carcinoma. Oncotarget, 8, 48, 84434-84448 Oncotarget, 8, 48, 84434-84448 Oncotarget, 8, 48, 84434-84448 2017/10 公開
Yasukawa K, Iida K, Okano H, Hidese R, Baba M, Yanagihara I, Kojima K, Takita T, Fujiwara S Yasukawa K, Iida K, Okano H, Hidese R, Baba M, Yanagihara I, Kojima K, Takita T, Fujiwara S Yasukawa K, Iida K, Okano H, Hidese R, Baba M, Yanagihara I, Kojima K, Takita T, Fujiwara S Next-generation sequencing-based analysis of reverse transcriptase fidelity. Next-generation sequencing-based analysis of reverse transcriptase fidelity. Next-generation sequencing-based analysis of reverse transcriptase fidelity. Biochemical and biophysical research communications, 492, 2, 147-153 Biochemical and biophysical research communications, 492, 2, 147-153 Biochemical and biophysical research communications, 492, 2, 147-153 2017/10 公開
Matsui A, Iida K, Tanaka M, Yamaguchi K, Mizuhashi K, Kim JM, Takahashi S, Kobayashi N, Shigenobu S, Shinozaki K, Seki M Matsui A, Iida K, Tanaka M, Yamaguchi K, Mizuhashi K, Kim JM, Takahashi S, Kobayashi N, Shigenobu S, Shinozaki K, Seki M Matsui A, Iida K, Tanaka M, Yamaguchi K, Mizuhashi K, Kim JM, Takahashi S, Kobayashi N, Shigenobu S, Shinozaki K, Seki M Novel Stress-Inducible Antisense RNAs of Protein-Coding Loci Are Synthesized by RNA-Dependent RNA Polymerase. Novel Stress-Inducible Antisense RNAs of Protein-Coding Loci Are Synthesized by RNA-Dependent RNA Polymerase. Novel Stress-Inducible Antisense RNAs of Protein-Coding Loci Are Synthesized by RNA-Dependent RNA Polymerase. Plant physiology, 175, 1, 457-472 Plant physiology, 175, 1, 457-472 Plant physiology, 175, 1, 457-472 2017/09 公開
Matsumoto S, Iida K, Murata A, Denawa M, Hagiwara M, Nakatani K Matsumoto S, Iida K, Murata A, Denawa M, Hagiwara M, Nakatani K Matsumoto S, Iida K, Murata A, Denawa M, Hagiwara M, Nakatani K Synthetic ligand promotes gene expression by affecting GC sequence in promoter. Synthetic ligand promotes gene expression by affecting GC sequence in promoter. Synthetic ligand promotes gene expression by affecting GC sequence in promoter. Bioorganic & medicinal chemistry letters, 27, 15, 3391-3394 Bioorganic & medicinal chemistry letters, 27, 15, 3391-3394 Bioorganic & medicinal chemistry letters, 27, 15, 3391-3394 2017/08 公開
Nguyen BN, Okuno Y, Ajiro M, Iida K, Denawa M, Yamamoto M, Sakamoto N, Kagechika H, Hagiwara M Nguyen BN, Okuno Y, Ajiro M, Iida K, Denawa M, Yamamoto M, Sakamoto N, Kagechika H, Hagiwara M Nguyen BN, Okuno Y, Ajiro M, Iida K, Denawa M, Yamamoto M, Sakamoto N, Kagechika H, Hagiwara M Retinoid derivative Tp80 exhibits anti-hepatitis C virus activity through restoration of GI-GPx expression. Retinoid derivative Tp80 exhibits anti-hepatitis C virus activity through restoration of GI-GPx expression. Retinoid derivative Tp80 exhibits anti-hepatitis C virus activity through restoration of GI-GPx expression. Journal of medical virology, 89, 7, 1224-1234 Journal of medical virology, 89, 7, 1224-1234 Journal of medical virology, 89, 7, 1224-1234 2017/07 公開
Okamoto M, Matsui A, Tanaka M, Morosawa T, Ishida J, Iida K, Mochizuki Y, Toyoda T, Seki M Okamoto M, Matsui A, Tanaka M, Morosawa T, Ishida J, Iida K, Mochizuki Y, Toyoda T, Seki M Okamoto M, Matsui A, Tanaka M, Morosawa T, Ishida J, Iida K, Mochizuki Y, Toyoda T, Seki M Sm-Like Protein-Mediated RNA Metabolism Is Required for Heat Stress Tolerance in Arabidopsis. Sm-Like Protein-Mediated RNA Metabolism Is Required for Heat Stress Tolerance in Arabidopsis. Sm-Like Protein-Mediated RNA Metabolism Is Required for Heat Stress Tolerance in Arabidopsis. Frontiers in plant science, 7, 1079 Frontiers in plant science, 7, 1079 Frontiers in plant science, 7, 1079 2016 公開
Oishi M, Oishi A, Gotoh N, Ogino K, Higasa K, Iida K, Makiyama Y, Morooka S, Matsuda F, Yoshimura N Oishi M, Oishi A, Gotoh N, Ogino K, Higasa K, Iida K, Makiyama Y, Morooka S, Matsuda F, Yoshimura N Oishi M, Oishi A, Gotoh N, Ogino K, Higasa K, Iida K, Makiyama Y, Morooka S, Matsuda F, Yoshimura N Next-generation sequencing-based comprehensive molecular analysis of 43 Japanese patients with cone and cone-rod dystrophies. Next-generation sequencing-based comprehensive molecular analysis of 43 Japanese patients with cone and cone-rod dystrophies. Next-generation sequencing-based comprehensive molecular analysis of 43 Japanese patients with cone and cone-rod dystrophies. Molecular vision, 22, 150-160 Molecular vision, 22, 150-160 Molecular vision, 22, 150-160 2016 公開
Sakuma M, Iida K, Hagiwara M Sakuma M, Iida K, Hagiwara M Sakuma M, Iida K, Hagiwara M Deciphering targeting rules of splicing modulator compounds: case of TG003. Deciphering targeting rules of splicing modulator compounds: case of TG003. Deciphering targeting rules of splicing modulator compounds: case of TG003. BMC molecular biology, 16, 16 BMC molecular biology, 16, 16 BMC molecular biology, 16, 16 2015/09 公開
Nguyen AH, Matsui A, Tanaka M, Mizunashi K, Nakaminami K, Hayashi M, Iida K, Toyoda T, Nguyen DV, Seki M Nguyen AH, Matsui A, Tanaka M, Mizunashi K, Nakaminami K, Hayashi M, Iida K, Toyoda T, Nguyen DV, Seki M Nguyen AH, Matsui A, Tanaka M, Mizunashi K, Nakaminami K, Hayashi M, Iida K, Toyoda T, Nguyen DV, Seki M Loss of Arabidopsis 5'-3' Exoribonuclease AtXRN4 Function Enhances Heat Stress Tolerance of Plants Subjected to Severe Heat Stress. Loss of Arabidopsis 5'-3' Exoribonuclease AtXRN4 Function Enhances Heat Stress Tolerance of Plants Subjected to Severe Heat Stress. Loss of Arabidopsis 5'-3' Exoribonuclease AtXRN4 Function Enhances Heat Stress Tolerance of Plants Subjected to Severe Heat Stress. Plant & cell physiology, 56, 9, 1762-1772 Plant & cell physiology, 56, 9, 1762-1772 Plant & cell physiology, 56, 9, 1762-1772 2015/09 公開
Yoshida M, Kataoka N, Miyauchi K, Ohe K, Iida K, Yoshida S, Nojima T, Okuno Y, Onogi H, Usui T, Takeuchi A, Hosoya T, Suzuki T, Hagiwara M. Yoshida M, Kataoka N, Miyauchi K, Ohe K, Iida K, Yoshida S, Nojima T, Okuno Y, Onogi H, Usui T, Takeuchi A, Hosoya T, Suzuki T, Hagiwara M. Yoshida M, Kataoka N, Miyauchi K, Ohe K, Iida K, Yoshida S, Nojima T, Okuno Y, Onogi H, Usui T, Takeuchi A, Hosoya T, Suzuki T, Hagiwara M. Rectifier of aberrant mRNA splicing recovers tRNA modification in familial dysautonomia. Rectifier of aberrant mRNA splicing recovers tRNA modification in familial dysautonomia. Rectifier of aberrant mRNA splicing recovers tRNA modification in familial dysautonomia. Proc Natl Acad Sci U S A., 112, 9, 2764-2769 Proc Natl Acad Sci U S A., 112, 9, 2764-2769 Proc Natl Acad Sci U S A., 112, 9, 2764-2769 2015/03 英語 研究論文(学術雑誌) 公開
Oishi M, Oishi A, Gotoh N, Ogino K, Higasa K, Iida K, Makiyama Y, Morooka S, Matsuda F, and Yoshimura N. Oishi M, Oishi A, Gotoh N, Ogino K, Higasa K, Iida K, Makiyama Y, Morooka S, Matsuda F, and Yoshimura N. Oishi M, Oishi A, Gotoh N, Ogino K, Higasa K, Iida K, Makiyama Y, Morooka S, Matsuda F, and Yoshimura N. Comprehensive molecular diagnosis of a large cohort of Japanese retinitis pigmentosa and Usher syndrome patients by next-generation sequencing. Comprehensive molecular diagnosis of a large cohort of Japanese retinitis pigmentosa and Usher syndrome patients by next-generation sequencing. Comprehensive molecular diagnosis of a large cohort of Japanese retinitis pigmentosa and Usher syndrome patients by next-generation sequencing. Invest Ophthalmol Vis Sci., 55, 11, 7369-7375 Invest Ophthalmol Vis Sci., 55, 11, 7369-7375 Invest Ophthalmol Vis Sci., 55, 11, 7369-7375 2014/10 英語 研究論文(学術雑誌) 公開
Yamamoto M, Onogi H, Kii I, Yoshida S, Iida K, Sakai H, Abe M, Tsubota T, Ito N, Hosoya T, and Hagiwara M. Yamamoto M, Onogi H, Kii I, Yoshida S, Iida K, Sakai H, Abe M, Tsubota T, Ito N, Hosoya T, and Hagiwara M. Yamamoto M, Onogi H, Kii I, Yoshida S, Iida K, Sakai H, Abe M, Tsubota T, Ito N, Hosoya T, and Hagiwara M. CDK9 inhibitor FIT-039 prevents replication of multiple DNA viruses. CDK9 inhibitor FIT-039 prevents replication of multiple DNA viruses. CDK9 inhibitor FIT-039 prevents replication of multiple DNA viruses. J Clin Invest., 124, 8, 3479-3488 J Clin Invest., 124, 8, 3479-3488 J Clin Invest., 124, 8, 3479-3488 2014/08 英語 研究論文(学術雑誌) 公開
FANTOM Consortium and the RIKEN PMI and CLST (DGT). FANTOM Consortium and the RIKEN PMI and CLST (DGT). FANTOM Consortium and the RIKEN PMI and CLST (DGT). A promoter-level mammalian expression atlas. A promoter-level mammalian expression atlas. A promoter-level mammalian expression atlas. Nature, 507, 7493, 462-470 Nature, 507, 7493, 462-470 Nature, 507, 7493, 462-470 2014/03 英語 研究論文(学術雑誌) 公開
Andersson R, Gebhard C, Miguel-Escalada I, Hoof I, Bornholdt J, Boyd M, Chen Y, Zhao X, Schmidl C, Suzuki T, Ntini E, Arner E, Valen E, Li K, Schwarzfischer L, Glatz D, Raithel J, Lilje B, Rapin N, Bagger FO, Jørgensen M, Andersen PR, Bertin N, Rackham O, Burroughs AM, Baillie JK, Ishizu Y, Shimizu Y, Furuhata E, Maeda S, Negishi Y, Mungall CJ, Meehan TF, Lassmann T, Itoh M, Kawaji H, Kondo N, Kawai J, Lennartsson A, Daub CO, Heutink P, Hume DA, Jensen TH, Suzuki H, Hayashizaki Y, Müller F; FANTOM Consortium, Forrest AR, Carninci P, Rehli M, and Sandelin A. Andersson R, Gebhard C, Miguel-Escalada I, Hoof I, Bornholdt J, Boyd M, Chen Y, Zhao X, Schmidl C, Suzuki T, Ntini E, Arner E, Valen E, Li K, Schwarzfischer L, Glatz D, Raithel J, Lilje B, Rapin N, Bagger FO, Jørgensen M, Andersen PR, Bertin N, Rackham O, Burroughs AM, Baillie JK, Ishizu Y, Shimizu Y, Furuhata E, Maeda S, Negishi Y, Mungall CJ, Meehan TF, Lassmann T, Itoh M, Kawaji H, Kondo N, Kawai J, Lennartsson A, Daub CO, Heutink P, Hume DA, Jensen TH, Suzuki H, Hayashizaki Y, Müller F; FANTOM Consortium, Forrest AR, Carninci P, Rehli M, and Sandelin A. Andersson R, Gebhard C, Miguel-Escalada I, Hoof I, Bornholdt J, Boyd M, Chen Y, Zhao X, Schmidl C, Suzuki T, Ntini E, Arner E, Valen E, Li K, Schwarzfischer L, Glatz D, Raithel J, Lilje B, Rapin N, Bagger FO, Jørgensen M, Andersen PR, Bertin N, Rackham O, Burroughs AM, Baillie JK, Ishizu Y, Shimizu Y, Furuhata E, Maeda S, Negishi Y, Mungall CJ, Meehan TF, Lassmann T, Itoh M, Kawaji H, Kondo N, Kawai J, Lennartsson A, Daub CO, Heutink P, Hume DA, Jensen TH, Suzuki H, Hayashizaki Y, Müller F; FANTOM Consortium, Forrest AR, Carninci P, Rehli M, and Sandelin A. An atlas of active enhancers across human cell types and tissues. An atlas of active enhancers across human cell types and tissues. An atlas of active enhancers across human cell types and tissues. Nature, 507, 7493, 455-461 Nature, 507, 7493, 455-461 Nature, 507, 7493, 455-461 2014/03 英語 研究論文(学術雑誌) 公開
K. Akiyama; A. Kurotani; K. Iida; T. Kuromori; K. Shinozaki; T. Sakurai K. Akiyama; A. Kurotani; K. Iida; T. Kuromori; K. Shinozaki; T. Sakurai K. Akiyama; A. Kurotani; K. Iida; T. Kuromori; K. Shinozaki; T. Sakurai RARGE II: An integrated phenotype database of arabidopsis mutant traits using a controlled vocabulary RARGE II: An integrated phenotype database of arabidopsis mutant traits using a controlled vocabulary RARGE II: An integrated phenotype database of arabidopsis mutant traits using a controlled vocabulary Plant and Cell Physiology, 55, 1, e4 Plant and Cell Physiology, 55, 1, e4 Plant and Cell Physiology, 55, 1, e4 2014 英語 公開
S. Kawaguchi; K. Iida; E. Harada; K. Hanada; A. Matsui; M. Okamoto; K. Shinozaki; M. Seki; T. Toyoda S. Kawaguchi; K. Iida; E. Harada; K. Hanada; A. Matsui; M. Okamoto; K. Shinozaki; M. Seki; T. Toyoda S. Kawaguchi; K. Iida; E. Harada; K. Hanada; A. Matsui; M. Okamoto; K. Shinozaki; M. Seki; T. Toyoda Positional correlation analysis improves reconstruction of full-length transcripts and alternative isoforms from noisy array signals or short reads Positional correlation analysis improves reconstruction of full-length transcripts and alternative isoforms from noisy array signals or short reads Positional correlation analysis improves reconstruction of full-length transcripts and alternative isoforms from noisy array signals or short reads Bioinformatics, 28, 7, 929-937 Bioinformatics, 28, 7, 929-937 Bioinformatics, 28, 7, 929-937 2012 英語 公開
K. Iida; S. Kawaguchi; N. Kobayashi; Y. Yoshida; M. Ishii; E. Harada; K. Hanada; A. Matsui; M. Okamoto; J. Ishida; M. Tanaka; T. Morosawa; M. Seki; T. Toyoda K. Iida; S. Kawaguchi; N. Kobayashi; Y. Yoshida; M. Ishii; E. Harada; K. Hanada; A. Matsui; M. Okamoto; J. Ishida; M. Tanaka; T. Morosawa; M. Seki; T. Toyoda K. Iida; S. Kawaguchi; N. Kobayashi; Y. Yoshida; M. Ishii; E. Harada; K. Hanada; A. Matsui; M. Okamoto; J. Ishida; M. Tanaka; T. Morosawa; M. Seki; T. Toyoda ARTADE2DB: Improved statistical inferences for arabidopsis gene functions and structure predictions by dynamic structure-based dynamic expression (DSDE) analyses ARTADE2DB: Improved statistical inferences for arabidopsis gene functions and structure predictions by dynamic structure-based dynamic expression (DSDE) analyses ARTADE2DB: Improved statistical inferences for arabidopsis gene functions and structure predictions by dynamic structure-based dynamic expression (DSDE) analyses Plant and Cell Physiology, 52, 2, 254-264 Plant and Cell Physiology, 52, 2, 254-264 Plant and Cell Physiology, 52, 2, 254-264 2011 英語 公開
K. Iida; H. Jin; J.-K. Zhu K. Iida; H. Jin; J.-K. Zhu K. Iida; H. Jin; J.-K. Zhu Bioinformatics analysis suggests base modifications of tRNAs and miRNAs in Arabidopsis thaliana Bioinformatics analysis suggests base modifications of tRNAs and miRNAs in Arabidopsis thaliana Bioinformatics analysis suggests base modifications of tRNAs and miRNAs in Arabidopsis thaliana BMC Genomics, 10 BMC Genomics, 10 BMC Genomics, 10 2009 英語 公開
Y. Makita; N. Kobayashi; Y. Mochizuki; Y. Yoshida; S. Asano; N. Heida; M. Deshpande; R. Bhatia; A. Matsushima; M. Ishii; S. Kawaguchi; K. Iida; K. Hanada; T. Kuromori; M. Seki; K. Shinozaki; T. Toyoda Y. Makita; N. Kobayashi; Y. Mochizuki; Y. Yoshida; S. Asano; N. Heida; M. Deshpande; R. Bhatia; A. Matsushima; M. Ishii; S. Kawaguchi; K. Iida; K. Hanada; T. Kuromori; M. Seki; K. Shinozaki; T. Toyoda Y. Makita; N. Kobayashi; Y. Mochizuki; Y. Yoshida; S. Asano; N. Heida; M. Deshpande; R. Bhatia; A. Matsushima; M. Ishii; S. Kawaguchi; K. Iida; K. Hanada; T. Kuromori; M. Seki; K. Shinozaki; T. Toyoda Posmed-plus: An intelligent search engine that inferentially integrates cross-species information resources for molecular breeding of plants Posmed-plus: An intelligent search engine that inferentially integrates cross-species information resources for molecular breeding of plants Posmed-plus: An intelligent search engine that inferentially integrates cross-species information resources for molecular breeding of plants Plant and Cell Physiology, 50, 7, 1249-1259 Plant and Cell Physiology, 50, 7, 1249-1259 Plant and Cell Physiology, 50, 7, 1249-1259 2009 英語 公開
K. Iida; K. Fukami-Kobayashi; A. Toyoda; Y. Sakaki; M. Kobayashi; M. Seki; K. Shinozaki K. Iida; K. Fukami-Kobayashi; A. Toyoda; Y. Sakaki; M. Kobayashi; M. Seki; K. Shinozaki K. Iida; K. Fukami-Kobayashi; A. Toyoda; Y. Sakaki; M. Kobayashi; M. Seki; K. Shinozaki Analysis of multiple occurrences of alternative splicing events in arabidopsis thaliana using novel sequenced full-length cDNAs Analysis of multiple occurrences of alternative splicing events in arabidopsis thaliana using novel sequenced full-length cDNAs Analysis of multiple occurrences of alternative splicing events in arabidopsis thaliana using novel sequenced full-length cDNAs DNA Research, 16, 3, 155-164 DNA Research, 16, 3, 155-164 DNA Research, 16, 3, 155-164 2009 英語 公開
K. Iida; M. Shionyu; Y. Suso K. Iida; M. Shionyu; Y. Suso K. Iida; M. Shionyu; Y. Suso Alternative splicing at NAGNAG acceptor sites shares common properties in land plants and mammals Alternative splicing at NAGNAG acceptor sites shares common properties in land plants and mammals Alternative splicing at NAGNAG acceptor sites shares common properties in land plants and mammals Molecular Biology and Evolution, 25, 4, 709-718 Molecular Biology and Evolution, 25, 4, 709-718 Molecular Biology and Evolution, 25, 4, 709-718 2008 英語 公開
N. O'Toole; M. Hattori; C. Andres; K. Iida; C. Lurin; C. Schmitz-Linneweber; M. Sugita; I. Small N. O'Toole; M. Hattori; C. Andres; K. Iida; C. Lurin; C. Schmitz-Linneweber; M. Sugita; I. Small N. O'Toole; M. Hattori; C. Andres; K. Iida; C. Lurin; C. Schmitz-Linneweber; M. Sugita; I. Small On the expansion of the pentatricopeptide repeat gene family in plants On the expansion of the pentatricopeptide repeat gene family in plants On the expansion of the pentatricopeptide repeat gene family in plants Molecular Biology and Evolution, 25, 6, 1120-1128 Molecular Biology and Evolution, 25, 6, 1120-1128 Molecular Biology and Evolution, 25, 6, 1120-1128 2008 英語 公開
X. Zheng; O. Pontes; J. Zhu; D. Miki; F. Zhang; W.-X. Li; K. Iida; A. Kapoor; C.S. Pikaard; J.-K. Zhu X. Zheng; O. Pontes; J. Zhu; D. Miki; F. Zhang; W.-X. Li; K. Iida; A. Kapoor; C.S. Pikaard; J.-K. Zhu X. Zheng; O. Pontes; J. Zhu; D. Miki; F. Zhang; W.-X. Li; K. Iida; A. Kapoor; C.S. Pikaard; J.-K. Zhu ROS3 is an RNA-binding protein required for DNA demethylation in Arabidopsis ROS3 is an RNA-binding protein required for DNA demethylation in Arabidopsis ROS3 is an RNA-binding protein required for DNA demethylation in Arabidopsis Nature, 455, 7217, 1259-1262 Nature, 455, 7217, 1259-1262 Nature, 455, 7217, 1259-1262 2008 英語 公開
W.-X. Li; Y. Oono; J. Zhu; X.-J. He; J.-M. Wu; K. Iida; X.-Y. Lu; X. Cui; H. Jin; J.-K. Zhu W.-X. Li; Y. Oono; J. Zhu; X.-J. He; J.-M. Wu; K. Iida; X.-Y. Lu; X. Cui; H. Jin; J.-K. Zhu W.-X. Li; Y. Oono; J. Zhu; X.-J. He; J.-M. Wu; K. Iida; X.-Y. Lu; X. Cui; H. Jin; J.-K. Zhu The Arabidopsis NFYA5 transcription factor is regulated transcriptionally and posttranscriptionally to promote drought resistance The Arabidopsis NFYA5 transcription factor is regulated transcriptionally and posttranscriptionally to promote drought resistance The Arabidopsis NFYA5 transcription factor is regulated transcriptionally and posttranscriptionally to promote drought resistance Plant Cell, 20, 8, 2238-2251 Plant Cell, 20, 8, 2238-2251 Plant Cell, 20, 8, 2238-2251 2008 英語 公開
K. Iida; K. Takishita; K. Ohshima; Y. Inagaki K. Iida; K. Takishita; K. Ohshima; Y. Inagaki K. Iida; K. Takishita; K. Ohshima; Y. Inagaki Assessing the monophyly of chlorophyll-c containing plastids by multi-gene phylogenies under the unlinked model conditions Assessing the monophyly of chlorophyll-c containing plastids by multi-gene phylogenies under the unlinked model conditions Assessing the monophyly of chlorophyll-c containing plastids by multi-gene phylogenies under the unlinked model conditions Molecular Phylogenetics and Evolution, 45, 1, 227-238 Molecular Phylogenetics and Evolution, 45, 1, 227-238 Molecular Phylogenetics and Evolution, 45, 1, 227-238 2007 英語 公開
M. Seki; J. Ishida; M. Nakajima; A. Enju; K. Iida; M. Satou; M. Fujita; Y. Narusaka; M. Narusaka; T. Sakurai; K. Akiyama; Y. Oono; A. Kamei; T. Umezawa; S. Mizukado; K. Maruyama; K. Yamaguchi-Shinozaki; K. Shinozaki M. Seki; J. Ishida; M. Nakajima; A. Enju; K. Iida; M. Satou; M. Fujita; Y. Narusaka; M. Narusaka; T. Sakurai; K. Akiyama; Y. Oono; A. Kamei; T. Umezawa; S. Mizukado; K. Maruyama; K. Yamaguchi-Shinozaki; K. Shinozaki M. Seki; J. Ishida; M. Nakajima; A. Enju; K. Iida; M. Satou; M. Fujita; Y. Narusaka; M. Narusaka; T. Sakurai; K. Akiyama; Y. Oono; A. Kamei; T. Umezawa; S. Mizukado; K. Maruyama; K. Yamaguchi-Shinozaki; K. Shinozaki Genomic Analysis of Stress Respnse Genomic Analysis of Stress Respnse Genomic Analysis of Stress Respnse Plant Abiotic Stress, 248-265 Plant Abiotic Stress, 248-265 Plant Abiotic Stress, 248-265 2007 英語 公開
K. Iida; M. Go K. Iida; M. Go K. Iida; M. Go Survey of conserved alternative splicing events of mRNAs encoding SR proteins in land plants Survey of conserved alternative splicing events of mRNAs encoding SR proteins in land plants Survey of conserved alternative splicing events of mRNAs encoding SR proteins in land plants Molecular Biology and Evolution, 23, 5, 1085-1094 Molecular Biology and Evolution, 23, 5, 1085-1094 Molecular Biology and Evolution, 23, 5, 1085-1094 2006 英語 公開
Y. Oono; M. Seki; M. Satou; K. Iida; K. Akiyama; T. Sakurai; M. Fujita; K. Yamaguchi-Shinozaki; K. Shinozaki Y. Oono; M. Seki; M. Satou; K. Iida; K. Akiyama; T. Sakurai; M. Fujita; K. Yamaguchi-Shinozaki; K. Shinozaki Y. Oono; M. Seki; M. Satou; K. Iida; K. Akiyama; T. Sakurai; M. Fujita; K. Yamaguchi-Shinozaki; K. Shinozaki Monitoring expression profiles of Arabidopsis genes during cold acclimation and deacclimation using DNA microarrays Monitoring expression profiles of Arabidopsis genes during cold acclimation and deacclimation using DNA microarrays Monitoring expression profiles of Arabidopsis genes during cold acclimation and deacclimation using DNA microarrays Functional and Integrative Genomics, 6, 3, 212-234 Functional and Integrative Genomics, 6, 3, 212-234 Functional and Integrative Genomics, 6, 3, 212-234 2006 英語 公開
Y. Hasegawa; M. Seki; Y. Mochizuki; N. Heida; K. Hirosawa; N. Okamoto; T. Sakurai; M. Satou; K. Akiyama; K. Iida; K. Lee; S. Kanaya; T. Demura; K. Shinozaki; A. Konagaya; T. Toyoda Y. Hasegawa; M. Seki; Y. Mochizuki; N. Heida; K. Hirosawa; N. Okamoto; T. Sakurai; M. Satou; K. Akiyama; K. Iida; K. Lee; S. Kanaya; T. Demura; K. Shinozaki; A. Konagaya; T. Toyoda Y. Hasegawa; M. Seki; Y. Mochizuki; N. Heida; K. Hirosawa; N. Okamoto; T. Sakurai; M. Satou; K. Akiyama; K. Iida; K. Lee; S. Kanaya; T. Demura; K. Shinozaki; A. Konagaya; T. Toyoda A flexible representation of omic knowledge for thorough analysis of microarray data A flexible representation of omic knowledge for thorough analysis of microarray data A flexible representation of omic knowledge for thorough analysis of microarray data Plant Methods, 2, 1 Plant Methods, 2, 1 Plant Methods, 2, 1 2006 英語 公開
T. Sakurai; M. Satou; K. Akiyama; K. Iida; M. Seki; T. Kuromori; T. Ito; A. Konagaya; T. Toyoda; K. Shinozaki T. Sakurai; M. Satou; K. Akiyama; K. Iida; M. Seki; T. Kuromori; T. Ito; A. Konagaya; T. Toyoda; K. Shinozaki T. Sakurai; M. Satou; K. Akiyama; K. Iida; M. Seki; T. Kuromori; T. Ito; A. Konagaya; T. Toyoda; K. Shinozaki RARGE: A large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome RARGE: A large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome RARGE: A large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome Nucleic Acids Research, 33, DATABASE ISS., D647-D650 Nucleic Acids Research, 33, DATABASE ISS., D647-D650 Nucleic Acids Research, 33, DATABASE ISS., D647-D650 2005 英語 公開
K. Iida; M. Seki; T. Sakurai; M. Satou; K. Akiyama; T. Toyoda; A. Konagaya; K. Shinozaki K. Iida; M. Seki; T. Sakurai; M. Satou; K. Akiyama; T. Toyoda; A. Konagaya; K. Shinozaki K. Iida; M. Seki; T. Sakurai; M. Satou; K. Akiyama; T. Toyoda; A. Konagaya; K. Shinozaki RARTF: Database and tools for complete sets of Arabidopsis transcription factors RARTF: Database and tools for complete sets of Arabidopsis transcription factors RARTF: Database and tools for complete sets of Arabidopsis transcription factors DNA Research, 12, 4, 247-256 DNA Research, 12, 4, 247-256 DNA Research, 12, 4, 247-256 2005 英語 公開
A. Yamaguchi; K. Iida; N. Matsui; S. Tomoda; K. Yura; M. Go A. Yamaguchi; K. Iida; N. Matsui; S. Tomoda; K. Yura; M. Go A. Yamaguchi; K. Iida; N. Matsui; S. Tomoda; K. Yura; M. Go Het-PDB Navi.: A Database for Protein-Small Molecule Interactions Het-PDB Navi.: A Database for Protein-Small Molecule Interactions Het-PDB Navi.: A Database for Protein-Small Molecule Interactions Journal of Biochemistry, 135, 1, 79-84 Journal of Biochemistry, 135, 1, 79-84 Journal of Biochemistry, 135, 1, 79-84 2004 英語 公開
K. Iida; M. Seki; T. Sakurai; M. Satou; K. Akiyama; T. Toyoda; A. Konagaya; K. Shinozaki K. Iida; M. Seki; T. Sakurai; M. Satou; K. Akiyama; T. Toyoda; A. Konagaya; K. Shinozaki K. Iida; M. Seki; T. Sakurai; M. Satou; K. Akiyama; T. Toyoda; A. Konagaya; K. Shinozaki Genome-wide analysis of alternative pre-mRNA splicing in Arabidopsis thaliana based on full-length cDNA sequences Genome-wide analysis of alternative pre-mRNA splicing in Arabidopsis thaliana based on full-length cDNA sequences Genome-wide analysis of alternative pre-mRNA splicing in Arabidopsis thaliana based on full-length cDNA sequences Nucleic Acids Research, 32, 17, 5096-5103 Nucleic Acids Research, 32, 17, 5096-5103 Nucleic Acids Research, 32, 17, 5096-5103 2004 英語 公開
M. Seki; M. Satou; T. Sakurai; K. Akiyama; K. Iida; J. Ishida; M. Nakajima; A. Enju; M. Narusaka; M. Fujita; Y. Oono; A. Kamei; K. Yamaguchi-Shinozaki; K. Shinozaki M. Seki; M. Satou; T. Sakurai; K. Akiyama; K. Iida; J. Ishida; M. Nakajima; A. Enju; M. Narusaka; M. Fujita; Y. Oono; A. Kamei; K. Yamaguchi-Shinozaki; K. Shinozaki M. Seki; M. Satou; T. Sakurai; K. Akiyama; K. Iida; J. Ishida; M. Nakajima; A. Enju; M. Narusaka; M. Fujita; Y. Oono; A. Kamei; K. Yamaguchi-Shinozaki; K. Shinozaki RIKEN Arabidopsis full-length (RAFL) cDNA and its applications for expression profiling under abiotic stress conditions RIKEN Arabidopsis full-length (RAFL) cDNA and its applications for expression profiling under abiotic stress conditions RIKEN Arabidopsis full-length (RAFL) cDNA and its applications for expression profiling under abiotic stress conditions Journal of Experimental Botany, 55, 395, 213-223 Journal of Experimental Botany, 55, 395, 213-223 Journal of Experimental Botany, 55, 395, 213-223 2004 英語 公開
Y. Oono; M. Seki; T. Nanjo; M. Narusaka; M. Fujita; R. Satoh; M. Satou; T. Sakurai; J. Ishida; K. Akiyama; K. Iida; K. Maruyama; S. Satoh; K. Yamaguchi-Shinozaki; K. Shinozaki Y. Oono; M. Seki; T. Nanjo; M. Narusaka; M. Fujita; R. Satoh; M. Satou; T. Sakurai; J. Ishida; K. Akiyama; K. Iida; K. Maruyama; S. Satoh; K. Yamaguchi-Shinozaki; K. Shinozaki Y. Oono; M. Seki; T. Nanjo; M. Narusaka; M. Fujita; R. Satoh; M. Satou; T. Sakurai; J. Ishida; K. Akiyama; K. Iida; K. Maruyama; S. Satoh; K. Yamaguchi-Shinozaki; K. Shinozaki Monitoring expression profiles of Arabidopsis gene expression during rehydration process after dehydration using ca. 7000 full-length cDNA microarray Monitoring expression profiles of Arabidopsis gene expression during rehydration process after dehydration using ca. 7000 full-length cDNA microarray Monitoring expression profiles of Arabidopsis gene expression during rehydration process after dehydration using ca. 7000 full-length cDNA microarray Plant Journal, 34, 6, 868-887 Plant Journal, 34, 6, 868-887 Plant Journal, 34, 6, 868-887 2003 英語 公開
K. Yamada; J. Lim; J.H. Dale; H. Chen; P. Shinn; C.J. Palm; A.M. Southwick; H.C. Wu; C. Kim; M. Nguyen; P. Pham; R. Cheuk; G. Karlin-Newmann; S.X. Liu; B. Lam; H. Sakano; T. Wu; G. Yu; M. Miranda; H.L. Quach; M. Tripp; C.H. Chang; J.M. Lee; M. Toriumi; M.M.H. Chan; C.C. Tang; C.S. Onodera; J.M. Deng; K. Akiyama; Y. Ansari; T. Arakawa; J. Banh; F. Banno; L. Bowser; S. Brooks; P. Carninci; Q. Chao; N. Choy; A. Enju; A.D. Goldsmith; M. Gurjal; N.F. Hansen; Y. Hayashizaki; C. Johnson-Hopson; V.W. Hsuan; K. Iida; M. Karnes; S. Khan; E. Koesema; J. Ishida; P.X. Jiang; T. Jones; J. Kawai; A. Kamiya; C. Meyers; M. Nakajima; M. Narusaka; M. Seki; T. Sakurai; M. Satou; R. Tamse; M. Vaysberg; E.K. Wallender; C. Wong; Y. Yamamura; S. Yuan; K. Shinozaki; R.W. Davis; A. Theologis; J.R. Ecker K. Yamada; J. Lim; J.H. Dale; H. Chen; P. Shinn; C.J. Palm; A.M. Southwick; H.C. Wu; C. Kim; M. Nguyen; P. Pham; R. Cheuk; G. Karlin-Newmann; S.X. Liu; B. Lam; H. Sakano; T. Wu; G. Yu; M. Miranda; H.L. Quach; M. Tripp; C.H. Chang; J.M. Lee; M. Toriumi; M.M.H. Chan; C.C. Tang; C.S. Onodera; J.M. Deng; K. Akiyama; Y. Ansari; T. Arakawa; J. Banh; F. Banno; L. Bowser; S. Brooks; P. Carninci; Q. Chao; N. Choy; A. Enju; A.D. Goldsmith; M. Gurjal; N.F. Hansen; Y. Hayashizaki; C. Johnson-Hopson; V.W. Hsuan; K. Iida; M. Karnes; S. Khan; E. Koesema; J. Ishida; P.X. Jiang; T. Jones; J. Kawai; A. Kamiya; C. Meyers; M. Nakajima; M. Narusaka; M. Seki; T. Sakurai; M. Satou; R. Tamse; M. Vaysberg; E.K. Wallender; C. Wong; Y. Yamamura; S. Yuan; K. Shinozaki; R.W. Davis; A. Theologis; J.R. Ecker K. Yamada; J. Lim; J.H. Dale; H. Chen; P. Shinn; C.J. Palm; A.M. Southwick; H.C. Wu; C. Kim; M. Nguyen; P. Pham; R. Cheuk; G. Karlin-Newmann; S.X. Liu; B. Lam; H. Sakano; T. Wu; G. Yu; M. Miranda; H.L. Quach; M. Tripp; C.H. Chang; J.M. Lee; M. Toriumi; M.M.H. Chan; C.C. Tang; C.S. Onodera; J.M. Deng; K. Akiyama; Y. Ansari; T. Arakawa; J. Banh; F. Banno; L. Bowser; S. Brooks; P. Carninci; Q. Chao; N. Choy; A. Enju; A.D. Goldsmith; M. Gurjal; N.F. Hansen; Y. Hayashizaki; C. Johnson-Hopson; V.W. Hsuan; K. Iida; M. Karnes; S. Khan; E. Koesema; J. Ishida; P.X. Jiang; T. Jones; J. Kawai; A. Kamiya; C. Meyers; M. Nakajima; M. Narusaka; M. Seki; T. Sakurai; M. Satou; R. Tamse; M. Vaysberg; E.K. Wallender; C. Wong; Y. Yamamura; S. Yuan; K. Shinozaki; R.W. Davis; A. Theologis; J.R. Ecker Empirical Analysis of Transcriptional Activity in the Arabidopsis Genome Empirical Analysis of Transcriptional Activity in the Arabidopsis Genome Empirical Analysis of Transcriptional Activity in the Arabidopsis Genome Science, 302, 5646, 842-846 Science, 302, 5646, 842-846 Science, 302, 5646, 842-846 2003 英語 公開

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著者 著者(日本語) 著者(英語) タイトル タイトル(日本語) タイトル(英語) 書誌情報等 書誌情報等(日本語) 書誌情報等(英語) 出版年月 査読の有無 記述言語 掲載種別 公開
Bashir K, Rasheed S, Matsui A, Iida K, Tanaka M, Seki M Bashir K, Rasheed S, Matsui A, Iida K, Tanaka M, Seki M Bashir K, Rasheed S, Matsui A, Iida K, Tanaka M, Seki M Monitoring Transcriptomic Changes in Soil-Grown Roots and Shoots of Arabidopsis thaliana Subjected to a Progressive Drought Stress. Monitoring Transcriptomic Changes in Soil-Grown Roots and Shoots of Arabidopsis thaliana Subjected to a Progressive Drought Stress. Monitoring Transcriptomic Changes in Soil-Grown Roots and Shoots of Arabidopsis thaliana Subjected to a Progressive Drought Stress. Methods in molecular biology (Clifton, N.J.), 1761, 223-230 Methods in molecular biology (Clifton, N.J.), 1761, 223-230 Methods in molecular biology (Clifton, N.J.), 1761, 223-230 2018 公開
タイトル言語:
外部資金:競争的資金・科学研究費補助金
種別 代表/分担 テーマ(日本語) テーマ(英語) 期間
若手研究(B) 代表 種間比較トランスクリプトーム解析に立脚したスプライシング操作薬の作用機序の解明 (平成27年度分) Computational studies for molecular mechanism of splicing- modulators upon comparative transcriptome analysis 2015/04/01〜2016/03/31
若手研究(B) 代表 種間比較トランスクリプトーム解析に立脚したスプライシング操作薬の作用機序の解明 (平成28年度分) Computational studies for molecular mechanism of splicing- modulators upon comparative transcriptome analysis 2016/04/01〜2017/03/31
若手研究(B) 代表 種間比較トランスクリプトーム解析に立脚したスプライシング操作薬の作用機序の解明 (平成29年度分) Computational studies for molecular mechanism of splicing- modulators upon comparative transcriptome analysis 2017/04/01〜2018/03/31
基盤B 分担 局所mRNAメチル化修飾による神経細胞遺伝情報「地方分権型」制御メカニズムの解明 Widely spread RNA modification at neuronal synapses add functional diversity to local transcriptome 2017/04/01〜2020/03/31
基盤S 分担 CRISPRによるRNA病モデルiPS細胞・動物の構築と病態解明・治療薬創製 2015/05/29〜2020/03/31
担当科目
講義名(日本語) 講義名(英語) 開講期 学部/研究科 年度
医学研究技術実習 Practicum on Medical Research 通年不定 医学研究科 2014/04〜2015/03
医学研究技術実習 Practicum on Medical Research 通年不定 医学研究科 2015/04〜2016/03
医学研究技術実習 Practicum on Medical Research 通年不定 医学研究科 2016/04〜2017/03
医学研究技術実習 Practicum on Medical Research 通年不定 医学研究科 2017/04〜2018/03
医学研究技術実習 Practicum on Medical Research 通年不定 医学研究科 2018/04〜2019/03
医学研究技術実習 Practicum on Medical Research 通年不定 医学研究科 2019/04〜2020/03