| Shoji Takada, Giovanni B Brandani, Cheng Tan |
Shoji Takada, Giovanni B Brandani, Cheng Tan |
Shoji Takada, Giovanni B Brandani, Cheng Tan |
Nucleosomes as allosteric scaffolds for genetic regulation. |
Nucleosomes as allosteric scaffolds for genetic regulation. |
Nucleosomes as allosteric scaffolds for genetic regulation. |
Current opinion in structural biology, 62, 93-101 |
Current opinion in structural biology, 62, 93-101 |
Current opinion in structural biology, 62, 93-101 |
2020/06 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Shintaroh Kubo, Toru Niina, Shoji Takada |
Shintaroh Kubo, Toru Niina, Shoji Takada |
Shintaroh Kubo, Toru Niina, Shoji Takada |
Molecular dynamics simulation of proton-transfer coupled rotations in ATP synthase FO motor.  |
Molecular dynamics simulation of proton-transfer coupled rotations in ATP synthase FO motor. |
Molecular dynamics simulation of proton-transfer coupled rotations in ATP synthase FO motor. |
Scientific reports, 10, 1, 8225-8225 |
Scientific reports, 10, 1, 8225-8225 |
Scientific reports, 10, 1, 8225-8225 |
2020/05/19 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Shintaroh Kubo, Tomohiro Shima, Shoji Takada |
Shintaroh Kubo, Tomohiro Shima, Shoji Takada |
Shintaroh Kubo, Tomohiro Shima, Shoji Takada |
How Cytoplasmic Dynein Couples ATP Hydrolysis Cycle to Diverse Stepping Motions: Kinetic Modeling. |
How Cytoplasmic Dynein Couples ATP Hydrolysis Cycle to Diverse Stepping Motions: Kinetic Modeling. |
How Cytoplasmic Dynein Couples ATP Hydrolysis Cycle to Diverse Stepping Motions: Kinetic Modeling. |
Biophysical journal, 118, 8, 1930-1945 |
Biophysical journal, 118, 8, 1930-1945 |
Biophysical journal, 118, 8, 1930-1945 |
2020/04/21 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Toru Niina, Sotaro Fuchigami, Shoji Takada |
Toru Niina, Sotaro Fuchigami, Shoji Takada |
Toru Niina, Sotaro Fuchigami, Shoji Takada |
Flexible Fitting of Biomolecular Structures to Atomic Force Microscopy Images via Biased Molecular Simulations. |
Flexible Fitting of Biomolecular Structures to Atomic Force Microscopy Images via Biased Molecular Simulations. |
Flexible Fitting of Biomolecular Structures to Atomic Force Microscopy Images via Biased Molecular Simulations. |
Journal of chemical theory and computation, 16, 2, 1349-1358 |
Journal of chemical theory and computation, 16, 2, 1349-1358 |
Journal of chemical theory and computation, 16, 2, 1349-1358 |
2020/02/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ryo Kanada, Tsuyoshi Terakawa, Hiroo Kenzaki, Shoji Takada |
Ryo Kanada, Tsuyoshi Terakawa, Hiroo Kenzaki, Shoji Takada |
Ryo Kanada, Tsuyoshi Terakawa, Hiroo Kenzaki, Shoji Takada |
Nucleosome Crowding in Chromatin Slows the Diffusion but Can Promote Target Search of Proteins. |
Nucleosome Crowding in Chromatin Slows the Diffusion but Can Promote Target Search of Proteins. |
Nucleosome Crowding in Chromatin Slows the Diffusion but Can Promote Target Search of Proteins. |
Biophysical journal, 116, 12, 2285-2295 |
Biophysical journal, 116, 12, 2285-2295 |
Biophysical journal, 116, 12, 2285-2295 |
2019/06/18 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Wenfei Li, Jun Wang, Jian Zhang, Shoji Takada, Wei Wang |
Wenfei Li, Jun Wang, Jian Zhang, Shoji Takada, Wei Wang |
Wenfei Li, Jun Wang, Jian Zhang, Shoji Takada, Wei Wang |
Overcoming the Bottleneck of the Enzymatic Cycle by Steric Frustration. |
Overcoming the Bottleneck of the Enzymatic Cycle by Steric Frustration. |
Overcoming the Bottleneck of the Enzymatic Cycle by Steric Frustration. |
Physical review letters, 122, 23, 238102-238102 |
Physical review letters, 122, 23, 238102-238102 |
Physical review letters, 122, 23, 238102-238102 |
2019/06/14 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Shoji Takada |
Shoji Takada |
Shoji Takada |
Gō model revisited. |
Gō model revisited. |
Gō model revisited. |
Biophysics and physicobiology, 16, 248-255 |
Biophysics and physicobiology, 16, 248-255 |
Biophysics and physicobiology, 16, 248-255 |
2019 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Giovanni B Brandani, Shoji Takada |
Giovanni B Brandani, Shoji Takada |
Giovanni B Brandani, Shoji Takada |
Chromatin remodelers couple inchworm motion with twist-defect formation to slide nucleosomal DNA. |
Chromatin remodelers couple inchworm motion with twist-defect formation to slide nucleosomal DNA. |
Chromatin remodelers couple inchworm motion with twist-defect formation to slide nucleosomal DNA. |
PLoS computational biology, 14, 11, e1006512 |
PLoS computational biology, 14, 11, e1006512 |
PLoS computational biology, 14, 11, e1006512 |
2018/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Cheng Tan, Shoji Takada |
Cheng Tan, Shoji Takada |
Cheng Tan, Shoji Takada |
Dynamic and Structural Modeling of the Specificity in Protein-DNA Interactions Guided by Binding Assay and Structure Data. |
Dynamic and Structural Modeling of the Specificity in Protein-DNA Interactions Guided by Binding Assay and Structure Data. |
Dynamic and Structural Modeling of the Specificity in Protein-DNA Interactions Guided by Binding Assay and Structure Data. |
Journal of chemical theory and computation, 14, 7, 3877-3889 |
Journal of chemical theory and computation, 14, 7, 3877-3889 |
Journal of chemical theory and computation, 14, 7, 3877-3889 |
2018/07/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Watanabe S, Mishima Y, Shimizu M, Suetake I, Takada S |
Watanabe S, Mishima Y, Shimizu M, Suetake I, Takada S |
Shuhei Watanabe, Yuichi Mishima, Masahiro Shimizu, Isao Suetake, Shoji Takada |
Interactions of HP1 Bound to H3K9me3 Dinucleosome by Molecular Simulations and Biochemical Assays. |
Interactions of HP1 Bound to H3K9me3 Dinucleosome by Molecular Simulations and Biochemical Assays. |
Interactions of HP1 Bound to H3K9me3 Dinucleosome by Molecular Simulations and Biochemical Assays. |
Biophysical journal, 114, 10, 2336-2351 |
Biophysical journal, 114, 10, 2336-2351 |
Biophysical journal, 114, 10, 2336-2351 |
2018/05/22 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Giovanni B Brandani, Toru Niina, Cheng Tan, Shoji Takada |
Giovanni B Brandani, Toru Niina, Cheng Tan, Shoji Takada |
Giovanni B Brandani, Toru Niina, Cheng Tan, Shoji Takada |
DNA sliding in nucleosomes via twist defect propagation revealed by molecular simulations. |
DNA sliding in nucleosomes via twist defect propagation revealed by molecular simulations. |
DNA sliding in nucleosomes via twist defect propagation revealed by molecular simulations. |
Nucleic acids research, 46, 6, 2788-2801 |
Nucleic acids research, 46, 6, 2788-2801 |
Nucleic acids research, 46, 6, 2788-2801 |
2018/04/06 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Masahiro Shimizu, Shoji Takada |
Masahiro Shimizu, Shoji Takada |
Masahiro Shimizu, Shoji Takada |
Reconstruction of Atomistic Structures from Coarse-Grained Models for Protein-DNA Complexes. |
Reconstruction of Atomistic Structures from Coarse-Grained Models for Protein-DNA Complexes. |
Reconstruction of Atomistic Structures from Coarse-Grained Models for Protein-DNA Complexes. |
Journal of chemical theory and computation, 14, 3, 1682-1694 |
Journal of chemical theory and computation, 14, 3, 1682-1694 |
Journal of chemical theory and computation, 14, 3, 1682-1694 |
2018/03/13 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Toru Niina, Giovanni B Brandani, Cheng Tan, Shoji Takada |
Toru Niina, Giovanni B Brandani, Cheng Tan, Shoji Takada |
Toru Niina, Giovanni B Brandani, Cheng Tan, Shoji Takada |
Sequence-dependent nucleosome sliding in rotation-coupled and uncoupled modes revealed by molecular simulations. |
Sequence-dependent nucleosome sliding in rotation-coupled and uncoupled modes revealed by molecular simulations. |
Sequence-dependent nucleosome sliding in rotation-coupled and uncoupled modes revealed by molecular simulations. |
PLoS computational biology, 13, 12, e1005880 |
PLoS computational biology, 13, 12, e1005880 |
PLoS computational biology, 13, 12, e1005880 |
2017/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Shintaroh Kubo, Wenfei Li, Shoji Takada |
Shintaroh Kubo, Wenfei Li, Shoji Takada |
Shintaroh Kubo, Wenfei Li, Shoji Takada |
Allosteric conformational change cascade in cytoplasmic dynein revealed by structure-based molecular simulations. |
Allosteric conformational change cascade in cytoplasmic dynein revealed by structure-based molecular simulations. |
Allosteric conformational change cascade in cytoplasmic dynein revealed by structure-based molecular simulations. |
PLoS computational biology, 13, 9, e1005748 |
PLoS computational biology, 13, 9, e1005748 |
PLoS computational biology, 13, 9, e1005748 |
2017/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mami Saito, Tsuyoshi Terakawa, Shoji Takada |
Mami Saito, Tsuyoshi Terakawa, Shoji Takada |
Mami Saito, Tsuyoshi Terakawa, Shoji Takada |
How one-dimensional diffusion of transcription factors are affected by obstacles: coarse-grained molecular dynamics study |
How one-dimensional diffusion of transcription factors are affected by obstacles: coarse-grained molecular dynamics study |
How one-dimensional diffusion of transcription factors are affected by obstacles: coarse-grained molecular dynamics study |
MOLECULAR SIMULATION, 43, 13-16, 1315-1321 |
MOLECULAR SIMULATION, 43, 13-16, 1315-1321 |
MOLECULAR SIMULATION, 43, 13-16, 1315-1321 |
2017 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Krah A, Kato-Yamada Y, Takada S |
Krah A, Kato-Yamada Y, Takada S |
Alexander Krah, Yasuyuki Kato-Yamada, Shoji Takada |
The structural basis of a high affinity ATP binding ε subunit from a bacterial ATP synthase. |
The structural basis of a high affinity ATP binding ε subunit from a bacterial ATP synthase. |
The structural basis of a high affinity ATP binding ε subunit from a bacterial ATP synthase. |
PloS one, 12, 5, e0177907 |
PloS one, 12, 5, e0177907 |
PloS one, 12, 5, e0177907 |
2017 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Masahiro Shimizu, Yasunori Noguchi, Yukari Sakiyama, Hironori Kawakami, Tsutomu Katayama, Shoji Takada |
Masahiro Shimizu, Yasunori Noguchi, Yukari Sakiyama, Hironori Kawakami, Tsutomu Katayama, Shoji Takada |
Masahiro Shimizu, Yasunori Noguchi, Yukari Sakiyama, Hironori Kawakami, Tsutomu Katayama, Shoji Takada |
Near-atomic structural model for bacterial DNA replication initiation complex and its functional insights. |
Near-atomic structural model for bacterial DNA replication initiation complex and its functional insights. |
Near-atomic structural model for bacterial DNA replication initiation complex and its functional insights. |
Proceedings of the National Academy of Sciences of the United States of America, 113, 50, E8021-E8030-E8030 |
Proceedings of the National Academy of Sciences of the United States of America, 113, 50, E8021-E8030-E8030 |
Proceedings of the National Academy of Sciences of the United States of America, 113, 50, E8021-E8030-E8030 |
2016/12/13 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Le Chang, Shoji Takada |
Le Chang, Shoji Takada |
Le Chang, Shoji Takada |
Histone acetylation dependent energy landscapes in tri-nucleosome revealed by residue-resolved molecular simulations. |
Histone acetylation dependent energy landscapes in tri-nucleosome revealed by residue-resolved molecular simulations. |
Histone acetylation dependent energy landscapes in tri-nucleosome revealed by residue-resolved molecular simulations. |
Scientific reports, 6, 34441-34441 |
Scientific reports, 6, 34441-34441 |
Scientific reports, 6, 34441-34441 |
2016/10/04 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Cheng Tan, Tsuyoshi Terakawa, Shoji Takada |
Cheng Tan, Tsuyoshi Terakawa, Shoji Takada |
Cheng Tan, Tsuyoshi Terakawa, Shoji Takada |
Dynamic Coupling among Protein Binding, Sliding, and DNA Bending Revealed by Molecular Dynamics. |
Dynamic Coupling among Protein Binding, Sliding, and DNA Bending Revealed by Molecular Dynamics. |
Dynamic Coupling among Protein Binding, Sliding, and DNA Bending Revealed by Molecular Dynamics. |
Journal of the American Chemical Society, 138, 27, 8512-22 |
Journal of the American Chemical Society, 138, 27, 8512-22 |
Journal of the American Chemical Society, 138, 27, 8512-22 |
2016/07/13 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Alexander Krah, Shoji Takada |
Alexander Krah, Shoji Takada |
Alexander Krah, Shoji Takada |
On the ATP binding site of the epsilon subunit from bacterial F-type ATP synthases |
On the ATP binding site of the epsilon subunit from bacterial F-type ATP synthases |
On the ATP binding site of the epsilon subunit from bacterial F-type ATP synthases |
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, 1857, 4, 332-340 |
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, 1857, 4, 332-340 |
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, 1857, 4, 332-340 |
2016/04 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Krah A, Takada S |
Krah A, Takada S |
Alexander Krah, Shoji Takada |
On the ATP binding site of the ε subunit from bacterial F-type ATP synthases. |
On the ATP binding site of the ε subunit from bacterial F-type ATP synthases. |
On the ATP binding site of the ε subunit from bacterial F-type ATP synthases. |
Biochimica et biophysica acta, 1857, 4, 332-40 |
Biochimica et biophysica acta, 1857, 4, 332-40 |
Biochimica et biophysica acta, 1857, 4, 332-40 |
2016/04 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Shoji Takada, Ryo Kanada, Cheng Tan, Tsuyoshi Terakawa, Wenfei Li, Hiroo Kenzaki |
Shoji Takada, Ryo Kanada, Cheng Tan, Tsuyoshi Terakawa, Wenfei Li, Hiroo Kenzaki |
Shoji Takada, Ryo Kanada, Cheng Tan, Tsuyoshi Terakawa, Wenfei Li, Hiroo Kenzaki |
Modeling Structural Dynamics of Biomolecular Complexes by Coarse-Grained Molecular Simulations |
Modeling Structural Dynamics of Biomolecular Complexes by Coarse-Grained Molecular Simulations |
Modeling Structural Dynamics of Biomolecular Complexes by Coarse-Grained Molecular Simulations |
ACCOUNTS OF CHEMICAL RESEARCH, 48, 12, 3026-3035 |
ACCOUNTS OF CHEMICAL RESEARCH, 48, 12, 3026-3035 |
ACCOUNTS OF CHEMICAL RESEARCH, 48, 12, 3026-3035 |
2015/12 |
有 |
英語 |
|
公開 |
| Tsuyoshi Terakawa, Shoji Takada |
Tsuyoshi Terakawa, Shoji Takada |
Tsuyoshi Terakawa, Shoji Takada |
p53 dynamics upon response element recognition explored by molecular simulations |
p53 dynamics upon response element recognition explored by molecular simulations |
p53 dynamics upon response element recognition explored by molecular simulations |
SCIENTIFIC REPORTS, 5, 17107 |
SCIENTIFIC REPORTS, 5, 17107 |
SCIENTIFIC REPORTS, 5, 17107 |
2015/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Alexander Krah, Shoji Takada |
Alexander Krah, Shoji Takada |
Alexander Krah, Shoji Takada |
On the Mg<sup>2+</sup> binding site of the ε subunit from bacterial F-type ATP synthases |
On the Mg<sup>2+</sup> binding site of the ε subunit from bacterial F-type ATP synthases |
On the Mg2+ binding site of the epsilon subunit from bacterial F-type ATP synthases |
Biochimica et Biophysica Acta - Bioenergetics, 1847, 10, 1101-1112 |
Biochimica et Biophysica Acta - Bioenergetics, 1847, 10, 1101-1112 |
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, 1847, 10, 1101-1112 |
2015/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Hiroo Kenzaki, Shoji Takada |
Hiroo Kenzaki, Shoji Takada |
Hiroo Kenzaki, Shoji Takada |
Partial Unwrapping and Histone Tail Dynamics in Nucleosome Revealed by Coarse-Grained Molecular Simulations |
Partial Unwrapping and Histone Tail Dynamics in Nucleosome Revealed by Coarse-Grained Molecular Simulations |
Partial Unwrapping and Histone Tail Dynamics in Nucleosome Revealed by Coarse-Grained Molecular Simulations |
PLOS COMPUTATIONAL BIOLOGY, 11, 8 |
PLOS COMPUTATIONAL BIOLOGY, 11, 8 |
PLOS COMPUTATIONAL BIOLOGY, 11, 8 |
2015/08 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Tomohiro Tanaka, Naoto Hori, Shoji Takada |
Tomohiro Tanaka, Naoto Hori, Shoji Takada |
Tomohiro Tanaka, Naoto Hori, Shoji Takada |
How Co-translational Folding of Multidomain Protein Is Affected by Elongation Schedule: Molecular Simulations |
How Co-translational Folding of Multidomain Protein Is Affected by Elongation Schedule: Molecular Simulations |
How Co-translational Folding of Multidomain Protein Is Affected by Elongation Schedule: Molecular Simulations |
PLOS COMPUTATIONAL BIOLOGY, 11, 7 |
PLOS COMPUTATIONAL BIOLOGY, 11, 7 |
PLOS COMPUTATIONAL BIOLOGY, 11, 7 |
2015/07 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Junichi Ono, Shoji Takada, Shinji Saito |
Junichi Ono, Shoji Takada, Shinji Saito |
Junichi Ono, Shoji Takada, Shinji Saito |
Couplings between hierarchical conformational dynamics from multi-time correlation functions and two-dimensional lifetime spectra: Application to adenylate kinase |
Couplings between hierarchical conformational dynamics from multi-time correlation functions and two-dimensional lifetime spectra: Application to adenylate kinase |
Couplings between hierarchical conformational dynamics from multi-time correlation functions and two-dimensional lifetime spectra: Application to adenylate kinase |
JOURNAL OF CHEMICAL PHYSICS, 142, 21, 212404 |
JOURNAL OF CHEMICAL PHYSICS, 142, 21, 212404 |
JOURNAL OF CHEMICAL PHYSICS, 142, 21, 212404 |
2015/06 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Koji Ono, Mashiho Ito, Shun Hirota, Shoji Takada |
Koji Ono, Mashiho Ito, Shun Hirota, Shoji Takada |
Koji Ono, Mashiho Ito, Shun Hirota, Shoji Takada |
Dimer domain swapping versus monomer folding in apo-myoglobin studied by molecular simulations |
Dimer domain swapping versus monomer folding in apo-myoglobin studied by molecular simulations |
Dimer domain swapping versus monomer folding in apo-myoglobin studied by molecular simulations |
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 17, 7, 5006-5013 |
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 17, 7, 5006-5013 |
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 17, 7, 5006-5013 |
2015 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Tsuyoshi Terakawa, Junichi Higo, Shoji Takada |
Tsuyoshi Terakawa, Junichi Higo, Shoji Takada |
Tsuyoshi Terakawa, Junichi Higo, Shoji Takada |
Multi-scale Ensemble Modeling of Modular Proteins with Intrinsically Disordered Linker Regions: Application to p53 |
Multi-scale Ensemble Modeling of Modular Proteins with Intrinsically Disordered Linker Regions: Application to p53 |
Multi-scale Ensemble Modeling of Modular Proteins with Intrinsically Disordered Linker Regions: Application to p53 |
BIOPHYSICAL JOURNAL, 107, 3, 721-729 |
BIOPHYSICAL JOURNAL, 107, 3, 721-729 |
BIOPHYSICAL JOURNAL, 107, 3, 721-729 |
2014/08 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Wenfei Li, Wei Wang, Shoji Takada |
Wenfei Li, Wei Wang, Shoji Takada |
Wenfei Li, Wei Wang, Shoji Takada |
Energy landscape views for interplays among folding, binding, and allostery of calmodulin domains |
Energy landscape views for interplays among folding, binding, and allostery of calmodulin domains |
Energy landscape views for interplays among folding, binding, and allostery of calmodulin domains |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 111, 29, 10550-10555 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 111, 29, 10550-10555 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 111, 29, 10550-10555 |
2014/07 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Tsuyoshi Terakawa, Shoji Takada |
Tsuyoshi Terakawa, Shoji Takada |
Tsuyoshi Terakawa, Shoji Takada |
RESPAC: Method to Determine Partial Charges in Coarse-Grained Protein Model and Its Application to DNA-Binding Proteins |
RESPAC: Method to Determine Partial Charges in Coarse-Grained Protein Model and Its Application to DNA-Binding Proteins |
RESPAC: Method to Determine Partial Charges in Coarse-Grained Protein Model and Its Application to DNA-Binding Proteins |
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 10, 2, 711-721 |
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 10, 2, 711-721 |
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 10, 2, 711-721 |
2014/02 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mashiho Ito, Takeaki Ozawa, Shoji Takada |
Mashiho Ito, Takeaki Ozawa, Shoji Takada |
Mashiho Ito, Takeaki Ozawa, Shoji Takada |
Folding Coupled with Assembly in Split Green Fluorescent Proteins Studied by Structure-based Molecular Simulations |
Folding Coupled with Assembly in Split Green Fluorescent Proteins Studied by Structure-based Molecular Simulations |
Folding Coupled with Assembly in Split Green Fluorescent Proteins Studied by Structure-based Molecular Simulations |
JOURNAL OF PHYSICAL CHEMISTRY B, 117, 42, 13212-13218 |
JOURNAL OF PHYSICAL CHEMISTRY B, 117, 42, 13212-13218 |
JOURNAL OF PHYSICAL CHEMISTRY B, 117, 42, 13212-13218 |
2013/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Yohei Murakami, Shoji Takada |
Yohei Murakami, Shoji Takada |
Yohei Murakami, Shoji Takada |
Bayesian Parameter Inference by Markov Chain Monte Carlo with Hybrid Fitness Measures: Theory and Test in Apoptosis Signal Transduction Network |
Bayesian Parameter Inference by Markov Chain Monte Carlo with Hybrid Fitness Measures: Theory and Test in Apoptosis Signal Transduction Network |
Bayesian Parameter Inference by Markov Chain Monte Carlo with Hybrid Fitness Measures: Theory and Test in Apoptosis Signal Transduction Network |
PLOS ONE, 8, 9 |
PLOS ONE, 8, 9 |
PLOS ONE, 8, 9 |
2013/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Matthew J. McGrath, I. -F. Will Kuo, Shigehiko Hayashi, Shoji Takada |
Matthew J. McGrath, I. -F. Will Kuo, Shigehiko Hayashi, Shoji Takada |
Matthew J. McGrath, I. -F. Will Kuo, Shigehiko Hayashi, Shoji Takada |
Adenosine Triphosphate Hydrolysis Mechanism in Kinesin Studied by Combined Quantum-Mechanical/Molecular-Mechanical Metadynamics Simulations |
Adenosine Triphosphate Hydrolysis Mechanism in Kinesin Studied by Combined Quantum-Mechanical/Molecular-Mechanical Metadynamics Simulations |
Adenosine Triphosphate Hydrolysis Mechanism in Kinesin Studied by Combined Quantum-Mechanical/Molecular-Mechanical Metadynamics Simulations |
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 135, 24, 8908-8919 |
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 135, 24, 8908-8919 |
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 135, 24, 8908-8919 |
2013/06 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Xin-Qiu Yao, Nobuhiro Kimura, Satoshi Murakami, Shoji Takada |
Xin-Qiu Yao, Nobuhiro Kimura, Satoshi Murakami, Shoji Takada |
Xin-Qiu Yao, Nobuhiro Kimura, Satoshi Murakami, Shoji Takada |
Drug Uptake Pathways of Multidrug Transporter AcrB Studied by Molecular Simulations and Site-Directed Mutagenesis Experiments |
Drug Uptake Pathways of Multidrug Transporter AcrB Studied by Molecular Simulations and Site-Directed Mutagenesis Experiments |
Drug Uptake Pathways of Multidrug Transporter AcrB Studied by Molecular Simulations and Site-Directed Mutagenesis Experiments |
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 135, 20, 7474-7485 |
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 135, 20, 7474-7485 |
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 135, 20, 7474-7485 |
2013/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Le Chang, Takeshi Ishikawa, Kazuo Kuwata, Shoji Takada |
Le Chang, Takeshi Ishikawa, Kazuo Kuwata, Shoji Takada |
Le Chang, Takeshi Ishikawa, Kazuo Kuwata, Shoji Takada |
Protein-specific force field derived from the fragment molecular orbital method can improve protein-ligand binding interactions |
Protein-specific force field derived from the fragment molecular orbital method can improve protein-ligand binding interactions |
Protein-specific force field derived from the fragment molecular orbital method can improve protein-ligand binding interactions |
JOURNAL OF COMPUTATIONAL CHEMISTRY, 34, 14, 1251-1257 |
JOURNAL OF COMPUTATIONAL CHEMISTRY, 34, 14, 1251-1257 |
JOURNAL OF COMPUTATIONAL CHEMISTRY, 34, 14, 1251-1257 |
2013/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| R. Kanada, T. Kuwata, H. Kenzaki, S. Takada |
R. Kanada, T. Kuwata, H. Kenzaki, S. Takada |
R. Kanada, T. Kuwata, H. Kenzaki, S. Takada |
Structure-based Molecular Simulations Reveal the Enhancement of Biased Brownian Motions in Single-headed Kinesin |
Structure-based Molecular Simulations Reveal the Enhancement of Biased Brownian Motions in Single-headed Kinesin |
Structure-based Molecular Simulations Reveal the Enhancement of Biased Brownian Motions in Single-headed Kinesin |
PLoS Computational Biology, 9, 2 |
PLoS Computational Biology, 9, 2 |
PLoS Computational Biology, 9, 2 |
2013 |
有 |
英語 |
|
公開 |
| Wenfei Li, Tsuyoshi Terakawa, Wei Wang, Shoji Takada |
Wenfei Li, Tsuyoshi Terakawa, Wei Wang, Shoji Takada |
Wenfei Li, Tsuyoshi Terakawa, Wei Wang, Shoji Takada |
Energy landscape and multiroute folding of topologically complex proteins adenylate kinase and 2ouf-knot |
Energy landscape and multiroute folding of topologically complex proteins adenylate kinase and 2ouf-knot |
Energy landscape and multiroute folding of topologically complex proteins adenylate kinase and 2ouf-knot |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 109, 44, 17789-17794 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 109, 44, 17789-17794 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 109, 44, 17789-17794 |
2012/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Naoto Hori, Shoji Takada |
Naoto Hori, Shoji Takada |
Naoto Hori, Shoji Takada |
Coarse-Grained Structure-Based Model for RNA-Protein Complexes Developed by Fluctuation Matching |
Coarse-Grained Structure-Based Model for RNA-Protein Complexes Developed by Fluctuation Matching |
Coarse-Grained Structure-Based Model for RNA-Protein Complexes Developed by Fluctuation Matching |
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 8, 9, 3384-3394 |
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 8, 9, 3384-3394 |
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 8, 9, 3384-3394 |
2012/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Tsuyoshi Terakawa, Hiroo Kenzaki, Shoji Takada |
Tsuyoshi Terakawa, Hiroo Kenzaki, Shoji Takada |
Tsuyoshi Terakawa, Hiroo Kenzaki, Shoji Takada |
p53 Searches on DNA by Rotation-Uncoupled Sliding at C-Terminal Tails and Restricted Hopping of Core Domains |
p53 Searches on DNA by Rotation-Uncoupled Sliding at C-Terminal Tails and Restricted Hopping of Core Domains |
p53 Searches on DNA by Rotation-Uncoupled Sliding at C-Terminal Tails and Restricted Hopping of Core Domains |
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 134, 35, 14555-14562 |
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 134, 35, 14555-14562 |
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 134, 35, 14555-14562 |
2012/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Shoji Takada |
Shoji Takada |
Shoji Takada |
Coarse-grained molecular simulations of large biomolecules |
Coarse-grained molecular simulations of large biomolecules |
Coarse-grained molecular simulations of large biomolecules |
CURRENT OPINION IN STRUCTURAL BIOLOGY, 22, 2, 130-137 |
CURRENT OPINION IN STRUCTURAL BIOLOGY, 22, 2, 130-137 |
CURRENT OPINION IN STRUCTURAL BIOLOGY, 22, 2, 130-137 |
2012/04 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Y. Murakami, S. Takada |
Y. Murakami, S. Takada |
Y. Murakami, S. Takada |
Rigor of cell fate decision by variable p53 pulses and roles of cooperative gene expression by p53 |
Rigor of cell fate decision by variable p53 pulses and roles of cooperative gene expression by p53 |
Rigor of cell fate decision by variable p53 pulses and roles of cooperative gene expression by p53 |
Biophysics, 8, 41-50 |
Biophysics, 8, 41-50 |
Biophysics, 8, 41-50 |
2012 |
有 |
英語 |
|
公開 |
| Tsuyoshi Terakawa, Shoji Takada |
Tsuyoshi Terakawa, Shoji Takada |
Tsuyoshi Terakawa, Shoji Takada |
Multiscale Ensemble Modeling of Intrinsically Disordered Proteins: p53 N-Terminal Domain |
Multiscale Ensemble Modeling of Intrinsically Disordered Proteins: p53 N-Terminal Domain |
Multiscale Ensemble Modeling of Intrinsically Disordered Proteins: p53 N-Terminal Domain |
BIOPHYSICAL JOURNAL, 101, 6, 1450-1458 |
BIOPHYSICAL JOURNAL, 101, 6, 1450-1458 |
BIOPHYSICAL JOURNAL, 101, 6, 1450-1458 |
2011/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Hiroo Kenzaki, Nobuyasu Koga, Naoto Hori, Ryo Kanada, Wenfei Li, Kei-ichi Okazaki, Xin-Qiu Yao, Shoji Takada |
Hiroo Kenzaki, Nobuyasu Koga, Naoto Hori, Ryo Kanada, Wenfei Li, Kei-ichi Okazaki, Xin-Qiu Yao, Shoji Takada |
Hiroo Kenzaki, Nobuyasu Koga, Naoto Hori, Ryo Kanada, Wenfei Li, Kei-ichi Okazaki, Xin-Qiu Yao, Shoji Takada |
CafeMol: A Coarse-Grained Biomolecular Simulator for Simulating Proteins at Work |
CafeMol: A Coarse-Grained Biomolecular Simulator for Simulating Proteins at Work |
CafeMol: A Coarse-Grained Biomolecular Simulator for Simulating Proteins at Work |
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 7, 6, 1979-1989 |
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 7, 6, 1979-1989 |
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 7, 6, 1979-1989 |
2011/06 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Tsuyoshi Terakawa, Tomoshi Kameda, Shoji Takada |
Tsuyoshi Terakawa, Tomoshi Kameda, Shoji Takada |
Tsuyoshi Terakawa, Tomoshi Kameda, Shoji Takada |
On Easy Implementation of a Variant of the Replica Exchange with Solute Tempering in GROMACS |
On Easy Implementation of a Variant of the Replica Exchange with Solute Tempering in GROMACS |
On Easy Implementation of a Variant of the Replica Exchange with Solute Tempering in GROMACS |
JOURNAL OF COMPUTATIONAL CHEMISTRY, 32, 7, 1228-1234 |
JOURNAL OF COMPUTATIONAL CHEMISTRY, 32, 7, 1228-1234 |
JOURNAL OF COMPUTATIONAL CHEMISTRY, 32, 7, 1228-1234 |
2011/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Kei-ichi Okazaki, Shoji Takada |
Kei-ichi Okazaki, Shoji Takada |
Kei-ichi Okazaki, Shoji Takada |
Structural Comparison of F-1-ATPase: Interplay among Enzyme Structures, Catalysis, and Rotations |
Structural Comparison of F-1-ATPase: Interplay among Enzyme Structures, Catalysis, and Rotations |
Structural Comparison of F-1-ATPase: Interplay among Enzyme Structures, Catalysis, and Rotations |
STRUCTURE, 19, 4, 588-598 |
STRUCTURE, 19, 4, 588-598 |
STRUCTURE, 19, 4, 588-598 |
2011/04 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Wenfei Li, Peter G. Wolynes, Shoji Takada |
Wenfei Li, Peter G. Wolynes, Shoji Takada |
Wenfei Li, Peter G. Wolynes, Shoji Takada |
Frustration, specific sequence dependence, and nonlinearity in large-amplitude fluctuations of allosteric proteins |
Frustration, specific sequence dependence, and nonlinearity in large-amplitude fluctuations of allosteric proteins |
Frustration, specific sequence dependence, and nonlinearity in large-amplitude fluctuations of allosteric proteins |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 108, 9, 3504-3509 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 108, 9, 3504-3509 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 108, 9, 3504-3509 |
2011/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Xin-Qiu Yao, Hiroo Kenzaki, Satoshi Murakami, Shoji Takada |
Xin-Qiu Yao, Hiroo Kenzaki, Satoshi Murakami, Shoji Takada |
Xin-Qiu Yao, Hiroo Kenzaki, Satoshi Murakami, Shoji Takada |
Drug export and allosteric coupling in a multidrug transporter revealed by molecular simulations |
Drug export and allosteric coupling in a multidrug transporter revealed by molecular simulations |
Drug export and allosteric coupling in a multidrug transporter revealed by molecular simulations |
NATURE COMMUNICATIONS, 1 |
NATURE COMMUNICATIONS, 1 |
NATURE COMMUNICATIONS, 1 |
2010/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| W. Li, S. Takada |
W. Li, S. Takada |
Wenfei Li, Shoji Takada |
Characterizing protein energy landscape by self-learning multiscale simulations: Application to a designed β-hairpin |
Characterizing protein energy landscape by self-learning multiscale simulations: Application to a designed β-hairpin |
Characterizing Protein Energy Landscape by Self-Learning Multiscale Simulations: Application to a Designed beta-Hairpin |
Biophysical Journal, 99, 9, 3029-3037 |
Biophysical Journal, 99, 9, 3029-3037 |
BIOPHYSICAL JOURNAL, 99, 9, 3029-3037 |
2010/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Wenfei Li, Hiroaki Yoshii, Naoto Hori, Tomoshi Kameda, Shoji Takada |
Wenfei Li, Hiroaki Yoshii, Naoto Hori, Tomoshi Kameda, Shoji Takada |
Wenfei Li, Hiroaki Yoshii, Naoto Hori, Tomoshi Kameda, Shoji Takada |
Multiscale methods for protein folding simulations |
Multiscale methods for protein folding simulations |
Multiscale methods for protein folding simulations |
METHODS, 52, 1, 106-114 |
METHODS, 52, 1, 106-114 |
METHODS, 52, 1, 106-114 |
2010/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Nobuyasu Koga, Tomoshi Kameda, Kei-ichi Okazaki, Shoji Takada |
Nobuyasu Koga, Tomoshi Kameda, Kei-ichi Okazaki, Shoji Takada |
Nobuyasu Koga, Tomoshi Kameda, Kei-ichi Okazaki, Shoji Takada |
Paddling mechanism for the substrate translocation by AAA plus motor revealed by multiscale molecular simulations |
Paddling mechanism for the substrate translocation by AAA plus motor revealed by multiscale molecular simulations |
Paddling mechanism for the substrate translocation by AAA plus motor revealed by multiscale molecular simulations |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 106, 43, 18237-18242 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 106, 43, 18237-18242 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 106, 43, 18237-18242 |
2009/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Wenfei Li, Shoji Takada |
Wenfei Li, Shoji Takada |
Wenfei Li, Shoji Takada |
Self-learning multiscale simulation for achieving high accuracy and high efficiency simultaneously |
Self-learning multiscale simulation for achieving high accuracy and high efficiency simultaneously |
Self-learning multiscale simulation for achieving high accuracy and high efficiency simultaneously |
JOURNAL OF CHEMICAL PHYSICS, 130, 21 |
JOURNAL OF CHEMICAL PHYSICS, 130, 21 |
JOURNAL OF CHEMICAL PHYSICS, 130, 21 |
2009/06 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Tatsuya Niwa, Bei-Wen Ying, Katsuyo Saito, WenZhen Jin, Shoji Takada, Takuya Ueda, Hideki Taguchi |
Tatsuya Niwa, Bei-Wen Ying, Katsuyo Saito, WenZhen Jin, Shoji Takada, Takuya Ueda, Hideki Taguchi |
Tatsuya Niwa, Bei-Wen Ying, Katsuyo Saito, WenZhen Jin, Shoji Takada, Takuya Ueda, Hideki Taguchi |
Bimodal protein solubility distribution revealed by an aggregation analysis of the entire ensemble of Escherichia coli proteins |
Bimodal protein solubility distribution revealed by an aggregation analysis of the entire ensemble of Escherichia coli proteins |
Bimodal protein solubility distribution revealed by an aggregation analysis of the entire ensemble of Escherichia coli proteins |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 106, 11, 4201-4206 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 106, 11, 4201-4206 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 106, 11, 4201-4206 |
2009/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Naoto Hori, George Chikenji, R. Stephen Berry, Shoji Takada |
Naoto Hori, George Chikenji, R. Stephen Berry, Shoji Takada |
Naoto Hori, George Chikenji, R. Stephen Berry, Shoji Takada |
Folding energy landscape and network dynamics of small globular proteins |
Folding energy landscape and network dynamics of small globular proteins |
Folding energy landscape and network dynamics of small globular proteins |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 106, 1, 73-78 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 106, 1, 73-78 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 106, 1, 73-78 |
2009/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Kei-ichi Okazaki, Shoji Takada |
Kei-ichi Okazaki, Shoji Takada |
Kei-ichi Okazaki, Shoji Takada |
Dynamic energy landscape view of coupled binding and protein conformational change: Induced-fit versus population-shift mechanisms |
Dynamic energy landscape view of coupled binding and protein conformational change: Induced-fit versus population-shift mechanisms |
Dynamic energy landscape view of coupled binding and protein conformational change: Induced-fit versus population-shift mechanisms |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 105, 32, 11182-11187 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 105, 32, 11182-11187 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 105, 32, 11182-11187 |
2008/08 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Tadaomi Furuta, Yoshimi Fujitsuka, George Chikenji, Shoji Takada |
Tadaomi Furuta, Yoshimi Fujitsuka, George Chikenji, Shoji Takada |
Tadaomi Furuta, Yoshimi Fujitsuka, George Chikenji, Shoji Takada |
In silico chaperonin-like cycle helps folding of proteins for structure prediction |
In silico chaperonin-like cycle helps folding of proteins for structure prediction |
In silico chaperonin-like cycle helps folding of proteins for structure prediction |
BIOPHYSICAL JOURNAL, 94, 7, 2558-2565 |
BIOPHYSICAL JOURNAL, 94, 7, 2558-2565 |
BIOPHYSICAL JOURNAL, 94, 7, 2558-2565 |
2008/04 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Wenzhen Jin, Shoji Takada |
Wenzhen Jin, Shoji Takada |
Wenzhen Jin, Shoji Takada |
Asymmetry in membrane protein sequence and structure: Glycine outside rule |
Asymmetry in membrane protein sequence and structure: Glycine outside rule |
Asymmetry in membrane protein sequence and structure: Glycine outside rule |
JOURNAL OF MOLECULAR BIOLOGY, 377, 1, 74-82 |
JOURNAL OF MOLECULAR BIOLOGY, 377, 1, 74-82 |
JOURNAL OF MOLECULAR BIOLOGY, 377, 1, 74-82 |
2008/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Chikenji George, Fujitsuka Yoshimi, Takada Shoji |
Chikenji George, Fujitsuka Yoshimi, Takada Shoji |
Chikenji George, Fujitsuka Yoshimi, Takada Shoji |
What we can learn about protein folding from recent progress in structure prediction |
What we can learn about protein folding from recent progress in structure prediction |
What we can learn about protein folding from recent progress in structure prediction |
FRONTIERS OF COMPUTATIONAL SCIENCE, 149-+ |
FRONTIERS OF COMPUTATIONAL SCIENCE, 149-+ |
FRONTIERS OF COMPUTATIONAL SCIENCE, 149-+ |
2007 |
有 |
|
|
公開 |
| Tomoshi Kameda, Shoji Takada |
Tomoshi Kameda, Shoji Takada |
Tomoshi Kameda, Shoji Takada |
Secondary structure provides a template for the folding of nearby polypeptides |
Secondary structure provides a template for the folding of nearby polypeptides |
Secondary structure provides a template for the folding of nearby polypeptides |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 103, 47, 17765-17770 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 103, 47, 17765-17770 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 103, 47, 17765-17770 |
2006/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Kei-ichi Okazaki, Nobuyasu Koga, Shoji Takada, Jose N. Onuchic, Peter G. Wolynes |
Kei-ichi Okazaki, Nobuyasu Koga, Shoji Takada, Jose N. Onuchic, Peter G. Wolynes |
Kei-ichi Okazaki, Nobuyasu Koga, Shoji Takada, Jose N. Onuchic, Peter G. Wolynes |
Multiple-basin energy landscapes for large-amplitude conformational motions of proteins: Structure-based molecular dynamics simulations |
Multiple-basin energy landscapes for large-amplitude conformational motions of proteins: Structure-based molecular dynamics simulations |
Multiple-basin energy landscapes for large-amplitude conformational motions of proteins: Structure-based molecular dynamics simulations |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 103, 32, 11844-11849 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 103, 32, 11844-11849 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 103, 32, 11844-11849 |
2006/08 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| C Kobayashi, S Takada |
C Kobayashi, S Takada |
C Kobayashi, S Takada |
Protein grabs a ligand by extending anchor residues: Molecular simulation for Ca2+ binding to calmodulin loop |
Protein grabs a ligand by extending anchor residues: Molecular simulation for Ca2+ binding to calmodulin loop |
Protein grabs a ligand by extending anchor residues: Molecular simulation for Ca2+ binding to calmodulin loop |
BIOPHYSICAL JOURNAL, 90, 9, 3043-3051 |
BIOPHYSICAL JOURNAL, 90, 9, 3043-3051 |
BIOPHYSICAL JOURNAL, 90, 9, 3043-3051 |
2006/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| N Koga, S Takada |
N Koga, S Takada |
N Koga, S Takada |
Folding-based molecular simulations reveal mechanisms of the rotary motor F-1-ATPase |
Folding-based molecular simulations reveal mechanisms of the rotary motor F-1-ATPase |
Folding-based molecular simulations reveal mechanisms of the rotary motor F-1-ATPase |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 103, 14, 5367-5372 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 103, 14, 5367-5372 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 103, 14, 5367-5372 |
2006/04 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| G Chikenji, Y Fujitsuka, S Takada |
G Chikenji, Y Fujitsuka, S Takada |
G Chikenji, Y Fujitsuka, S Takada |
Shaping up the protein folding funnel by local interaction: Lesson from a structure prediction study |
Shaping up the protein folding funnel by local interaction: Lesson from a structure prediction study |
Shaping up the protein folding funnel by local interaction: Lesson from a structure prediction study |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 103, 9, 3141-3146 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 103, 9, 3141-3146 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 103, 9, 3141-3146 |
2006/02 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Y Fujitsuka, G Chikenji, S Takada |
Y Fujitsuka, G Chikenji, S Takada |
Y Fujitsuka, G Chikenji, S Takada |
SimFold energy function for de novo protein structure prediction: Consensus with Rosetta |
SimFold energy function for de novo protein structure prediction: Consensus with Rosetta |
SimFold energy function for de novo protein structure prediction: Consensus with Rosetta |
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 62, 2, 381-398 |
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 62, 2, 381-398 |
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 62, 2, 381-398 |
2006/02 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| 蟻川浩, 増田慎吾, 古田忠臣, 金文珍, 朴聖俊, 高田彰二, 藤川和利, 砂原秀樹 |
蟻川浩, 増田慎吾, 古田忠臣, 金文珍, 朴聖俊, 高田彰二, 藤川和利, 砂原秀樹 |
Hiroshi Arikawa, Shingo Masuda, Tadaomi Furuta, Wenzhen Jin, Sung-Joon Park, Shoji Takada, Kazutoshi Fujikawa, Hideki Sunahara |
対話的動作を考慮したタンパク質立体構造予測システム |
対話的動作を考慮したタンパク質立体構造予測システム |
A computing system for protein structure prediction with trial-and-error process |
情報処理学会論文誌：コンピューティングシステム, 46, SIG12(ACS11), 407-419 |
情報処理学会論文誌：コンピューティングシステム, 46, SIG12(ACS11), 407-419 |
IPSJ Transactions on Advanced Computing Systems, 46, SIG12(ACS11), 407-419 |
2005/08 |
有 |
日本語 |
研究論文(学術雑誌) |
公開 |
| Kazutoshi Fujikawa, Wenzhen Jin, Sung-Joon Park, Tadaomi Furuta, Shoji Takada, Hiroshi Arikawa, Susumu Date, Shinji Shimojo |
Kazutoshi Fujikawa, Wenzhen Jin, Sung-Joon Park, Tadaomi Furuta, Shoji Takada, Hiroshi Arikawa, Susumu Date, Shinji Shimojo |
Kazutoshi Fujikawa, Wenzhen Jin, Sung-Joon Park, Tadaomi Furuta, Shoji Takada, Hiroshi Arikawa, Susumu Date, Shinji Shimojo |
Applying a Grid Technology to Protein Structure Predictor "ROKKY" |
Applying a Grid Technology to Protein Structure Predictor "ROKKY" |
Applying a Grid Technology to Protein Structure Predictor "ROKKY" |
FROM GRID TO HEALTHGRID, 112, 27-36 |
FROM GRID TO HEALTHGRID, 112, 27-36 |
FROM GRID TO HEALTHGRID, 112, 27-36 |
2005 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| G Chikenji, Y Fujitsuka, S Takada |
G Chikenji, Y Fujitsuka, S Takada |
G Chikenji, Y Fujitsuka, S Takada |
Protein folding mechanisms and energy landscape of src SH3 domain studied by a structure prediction toolbox |
Protein folding mechanisms and energy landscape of src SH3 domain studied by a structure prediction toolbox |
Protein folding mechanisms and energy landscape of src SH3 domain studied by a structure prediction toolbox |
CHEMICAL PHYSICS, 307, 2-3, 157-162 |
CHEMICAL PHYSICS, 307, 2-3, 157-162 |
CHEMICAL PHYSICS, 307, 2-3, 157-162 |
2004/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| YJ Zhu, XR Fu, T Wang, A Tamura, S Takada, JG Savan, F Gai |
YJ Zhu, XR Fu, T Wang, A Tamura, S Takada, JG Savan, F Gai |
YJ Zhu, XR Fu, T Wang, A Tamura, S Takada, JG Savan, F Gai |
Guiding the search for a protein's maximum rate of folding |
Guiding the search for a protein's maximum rate of folding |
Guiding the search for a protein's maximum rate of folding |
CHEMICAL PHYSICS, 307, 2-3, 99-109 |
CHEMICAL PHYSICS, 307, 2-3, 99-109 |
CHEMICAL PHYSICS, 307, 2-3, 99-109 |
2004/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| S.Y. Lee, Y. Fujitsuka, D.H. Kim, S. Takada |
S.Y. Lee, Y. Fujitsuka, D.H. Kim, S. Takada |
SY Lee, Y Fujitsuka, DH Kim, S Takada |
Roles of Physical Interactions in Determining Protein-Folding Mechanisms: Molecular Simulation of Protein G and α Spectrin SH3 |
Roles of Physical Interactions in Determining Protein-Folding Mechanisms: Molecular Simulation of Protein G and α Spectrin SH3 |
Roles of physical interactions in determining protein folding mechanisms: Molecular simulation of protein G and alpha spectrin SH3 |
Proteins: Structure, Function and Genetics, 55, 1, 128-138 |
Proteins: Structure, Function and Genetics, 55, 1, 128-138 |
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 55, 1, 128-138 |
2004/04 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Y Fujitsuka, S Takada, ZA Luthey-Schulten, PG Wolynes |
Y Fujitsuka, S Takada, ZA Luthey-Schulten, PG Wolynes |
Y Fujitsuka, S Takada, ZA Luthey-Schulten, PG Wolynes |
Optimizing physical energy functions for protein folding |
Optimizing physical energy functions for protein folding |
Optimizing physical energy functions for protein folding |
PROTEINS-STRUCTURE FUNCTION AND GENETICS, 54, 1, 88-103 |
PROTEINS-STRUCTURE FUNCTION AND GENETICS, 54, 1, 88-103 |
PROTEINS-STRUCTURE FUNCTION AND GENETICS, 54, 1, 88-103 |
2004/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| AR Kinjo, S Takada |
AR Kinjo, S Takada |
AR Kinjo, S Takada |
Competition between protein folding and aggregation with molecular chaperones in crowded solutions: Insight from mesoscopic simulations |
Competition between protein folding and aggregation with molecular chaperones in crowded solutions: Insight from mesoscopic simulations |
Competition between protein folding and aggregation with molecular chaperones in crowded solutions: Insight from mesoscopic simulations |
BIOPHYSICAL JOURNAL, 85, 6, 3521-3531 |
BIOPHYSICAL JOURNAL, 85, 6, 3521-3531 |
BIOPHYSICAL JOURNAL, 85, 6, 3521-3531 |
2003/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| G Chikenji, Y Fujitsuka, S Takada |
G Chikenji, Y Fujitsuka, S Takada |
G Chikenji, Y Fujitsuka, S Takada |
A reversible fragment assembly method for de novo protein structure prediction |
A reversible fragment assembly method for de novo protein structure prediction |
A reversible fragment assembly method for de novo protein structure prediction |
JOURNAL OF CHEMICAL PHYSICS, 119, 13, 6895-6903 |
JOURNAL OF CHEMICAL PHYSICS, 119, 13, 6895-6903 |
JOURNAL OF CHEMICAL PHYSICS, 119, 13, 6895-6903 |
2003/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| F Takagi, N Koga, S Takada |
F Takagi, N Koga, S Takada |
F Takagi, N Koga, S Takada |
How protein thermodynamics and folding mechanisms are altered by the chaperonin cage: Molecular simulations |
How protein thermodynamics and folding mechanisms are altered by the chaperonin cage: Molecular simulations |
How protein thermodynamics and folding mechanisms are altered by the chaperonin cage: Molecular simulations |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 100, 20, 11367-11372 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 100, 20, 11367-11372 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 100, 20, 11367-11372 |
2003/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| WZ Jin, O Kambara, H Sasakawa, A Tamura, S Takada |
WZ Jin, O Kambara, H Sasakawa, A Tamura, S Takada |
WZ Jin, O Kambara, H Sasakawa, A Tamura, S Takada |
De novo design of foldable proteins with smooth folding funnel: Automated negative design and experimental verification |
De novo design of foldable proteins with smooth folding funnel: Automated negative design and experimental verification |
De novo design of foldable proteins with smooth folding funnel: Automated negative design and experimental verification |
STRUCTURE, 11, 5, 581-590 |
STRUCTURE, 11, 5, 581-590 |
STRUCTURE, 11, 5, 581-590 |
2003/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| AR Kinjo, S Takada |
AR Kinjo, S Takada |
AR Kinjo, S Takada |
Effects of macromolecular crowding on protein folding and aggregation studied by density functional theory: Dynamics |
Effects of macromolecular crowding on protein folding and aggregation studied by density functional theory: Dynamics |
Effects of macromolecular crowding on protein folding and aggregation studied by density functional theory: Dynamics |
PHYSICAL REVIEW E, 66, 5, 051902/1-051902/10 |
PHYSICAL REVIEW E, 66, 5, 051902/1-051902/10 |
PHYSICAL REVIEW E, 66, 5, 051902/1-051902/10 |
2002/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| AR Kinjo, S Takada |
AR Kinjo, S Takada |
AR Kinjo, S Takada |
Effects of macromolecular crowding on protein folding and aggregation studied by density functional theory: Statics |
Effects of macromolecular crowding on protein folding and aggregation studied by density functional theory: Statics |
Effects of macromolecular crowding on protein folding and aggregation studied by density functional theory: Statics |
PHYSICAL REVIEW E, 66, 3, 031911/1-031911/9 |
PHYSICAL REVIEW E, 66, 3, 031911/1-031911/9 |
PHYSICAL REVIEW E, 66, 3, 031911/1-031911/9 |
2002/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| H Fukunishi, O Watanabe, S Takada |
H Fukunishi, O Watanabe, S Takada |
H Fukunishi, O Watanabe, S Takada |
On the Hamiltonian replica exchange method for efficient sampling of biomolecular systems: Application to protein structure prediction |
On the Hamiltonian replica exchange method for efficient sampling of biomolecular systems: Application to protein structure prediction |
On the Hamiltonian replica exchange method for efficient sampling of biomolecular systems: Application to protein structure prediction |
JOURNAL OF CHEMICAL PHYSICS, 116, 20, 9058-9067 |
JOURNAL OF CHEMICAL PHYSICS, 116, 20, 9058-9067 |
JOURNAL OF CHEMICAL PHYSICS, 116, 20, 9058-9067 |
2002/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| N. Koga, S. Takada |
N. Koga, S. Takada |
N Koga, S Takada |
Roles of native topology and chain-length scaling in protein folding: A simulation study with a ḡ-like model |
Roles of native topology and chain-length scaling in protein folding: A simulation study with a ḡ-like model |
Roles of native topology and chain-length scaling in protein folding: A simulation study with a Go-like model |
Journal of Molecular Biology, 313, 1, 171-180 |
Journal of Molecular Biology, 313, 1, 171-180 |
JOURNAL OF MOLECULAR BIOLOGY, 313, 1, 171-180 |
2001/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| JJ Portman, S Takada, PG Wolynes |
JJ Portman, S Takada, PG Wolynes |
JJ Portman, S Takada, PG Wolynes |
Microscopic theory of protein folding rates. II. Local reaction coordinates and chain dynamics |
Microscopic theory of protein folding rates. II. Local reaction coordinates and chain dynamics |
Microscopic theory of protein folding rates. II. Local reaction coordinates and chain dynamics |
JOURNAL OF CHEMICAL PHYSICS, 114, 11, 5082-5096 |
JOURNAL OF CHEMICAL PHYSICS, 114, 11, 5082-5096 |
JOURNAL OF CHEMICAL PHYSICS, 114, 11, 5082-5096 |
2001/03 |
有 |
英語 |
|
公開 |
| JJ Portman, S Takada, PG Wolynes |
JJ Portman, S Takada, PG Wolynes |
JJ Portman, S Takada, PG Wolynes |
Microscopic theory of protein folding rates. I. Fine structure of the free energy profile and folding routes from a variational approach |
Microscopic theory of protein folding rates. I. Fine structure of the free energy profile and folding routes from a variational approach |
Microscopic theory of protein folding rates. I. Fine structure of the free energy profile and folding routes from a variational approach |
JOURNAL OF CHEMICAL PHYSICS, 114, 11, 5069-5081 |
JOURNAL OF CHEMICAL PHYSICS, 114, 11, 5069-5081 |
JOURNAL OF CHEMICAL PHYSICS, 114, 11, 5069-5081 |
2001/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| S Takada |
S Takada |
S Takada |
Protein folding simulation with solvent-induced force field: Folding pathway ensemble of three-helix-bundle proteins |
Protein folding simulation with solvent-induced force field: Folding pathway ensemble of three-helix-bundle proteins |
Protein folding simulation with solvent-induced force field: Folding pathway ensemble of three-helix-bundle proteins |
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 42, 1, 85-98 |
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 42, 1, 85-98 |
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 42, 1, 85-98 |
2001/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| S Takada |
S Takada |
S Takada |
Simulating folding of helical proteins with coarse grained models |
Simulating folding of helical proteins with coarse grained models |
Simulating folding of helical proteins with coarse grained models |
PROGRESS OF THEORETICAL PHYSICS SUPPLEMENT, 138, 366-371 |
PROGRESS OF THEORETICAL PHYSICS SUPPLEMENT, 138, 366-371 |
PROGRESS OF THEORETICAL PHYSICS SUPPLEMENT, 138, 366-371 |
2000 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| S Takada |
S Takada |
S Takada |
G(o)over-bar-ing for the prediction of protein folding mechanisms |
G(o)over-bar-ing for the prediction of protein folding mechanisms |
G(o)over-bar-ing for the prediction of protein folding mechanisms |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 96, 21, 11698-11700 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 96, 21, 11698-11700 |
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 96, 21, 11698-11700 |
1999/10 |
有 |
英語 |
|
公開 |
| S Takada, Z Luthey-Schulten, PG Wolynes |
S Takada, Z Luthey-Schulten, PG Wolynes |
S Takada, Z Luthey-Schulten, PG Wolynes |
Folding dynamics with nonadditive forces: A simulation study of a designed helical protein and a random heteropolymer |
Folding dynamics with nonadditive forces: A simulation study of a designed helical protein and a random heteropolymer |
Folding dynamics with nonadditive forces: A simulation study of a designed helical protein and a random heteropolymer |
JOURNAL OF CHEMICAL PHYSICS, 110, 23, 11616-11629 |
JOURNAL OF CHEMICAL PHYSICS, 110, 23, 11616-11629 |
JOURNAL OF CHEMICAL PHYSICS, 110, 23, 11616-11629 |
1999/06 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| JJ Portman, S Takada, PG Wolynes |
JJ Portman, S Takada, PG Wolynes |
JJ Portman, S Takada, PG Wolynes |
Variational theory for site resolved protein folding free energy surfaces |
Variational theory for site resolved protein folding free energy surfaces |
Variational theory for site resolved protein folding free energy surfaces |
PHYSICAL REVIEW LETTERS, 81, 23, 5237-5240 |
PHYSICAL REVIEW LETTERS, 81, 23, 5237-5240 |
PHYSICAL REVIEW LETTERS, 81, 23, 5237-5240 |
1998/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| S Takada, PG Wolynes |
S Takada, PG Wolynes |
S Takada, PG Wolynes |
Microscopic theory of critical folding nuclei and reconfiguration activation barriers in folding proteins |
Microscopic theory of critical folding nuclei and reconfiguration activation barriers in folding proteins |
Microscopic theory of critical folding nuclei and reconfiguration activation barriers in folding proteins |
JOURNAL OF CHEMICAL PHYSICS, 107, 22, 9585-9598 |
JOURNAL OF CHEMICAL PHYSICS, 107, 22, 9585-9598 |
JOURNAL OF CHEMICAL PHYSICS, 107, 22, 9585-9598 |
1997/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| S Takada, PG Wolynes |
S Takada, PG Wolynes |
S Takada, PG Wolynes |
Statics, metastable states, and barriers in protein folding: A replica variational approach |
Statics, metastable states, and barriers in protein folding: A replica variational approach |
Statics, metastable states, and barriers in protein folding: A replica variational approach |
PHYSICAL REVIEW E, 55, 4, 4562-4577 |
PHYSICAL REVIEW E, 55, 4, 4562-4577 |
PHYSICAL REVIEW E, 55, 4, 4562-4577 |
1997/04 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| S Takada, PG Wolynes |
S Takada, PG Wolynes |
S Takada, PG Wolynes |
Glassy dynamics of random heteropolymers |
Glassy dynamics of random heteropolymers |
Glassy dynamics of random heteropolymers |
PROGRESS OF THEORETICAL PHYSICS SUPPLEMENT, 126, 49-52 |
PROGRESS OF THEORETICAL PHYSICS SUPPLEMENT, 126, 49-52 |
PROGRESS OF THEORETICAL PHYSICS SUPPLEMENT, 126, 49-52 |
1997 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| S Takada |
S Takada |
S Takada |
Multidimensional tunneling in terms of complex classical mechanics: Wave functions, energy splittings, and decay rates in nonintegrable systems |
Multidimensional tunneling in terms of complex classical mechanics: Wave functions, energy splittings, and decay rates in nonintegrable systems |
Multidimensional tunneling in terms of complex classical mechanics: Wave functions, energy splittings, and decay rates in nonintegrable systems |
JOURNAL OF CHEMICAL PHYSICS, 104, 10, 3742-3759 |
JOURNAL OF CHEMICAL PHYSICS, 104, 10, 3742-3759 |
JOURNAL OF CHEMICAL PHYSICS, 104, 10, 3742-3759 |
1996/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| S TAKADA, PN WALKER, M WILKINSON |
S TAKADA, PN WALKER, M WILKINSON |
S TAKADA, PN WALKER, M WILKINSON |
TRANSFER-MATRIX APPROACH TO TUNNELING BETWEEN KOLMOGOROV-ARNOLD-MOSER TORI |
TRANSFER-MATRIX APPROACH TO TUNNELING BETWEEN KOLMOGOROV-ARNOLD-MOSER TORI |
TRANSFER-MATRIX APPROACH TO TUNNELING BETWEEN KOLMOGOROV-ARNOLD-MOSER TORI |
PHYSICAL REVIEW A, 52, 5, 3546-3553 |
PHYSICAL REVIEW A, 52, 5, 3546-3553 |
PHYSICAL REVIEW A, 52, 5, 3546-3553 |
1995/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| S TAKADA, H NAKAMURA |
S TAKADA, H NAKAMURA |
S TAKADA, H NAKAMURA |
EFFECTS OF VIBRATIONAL-EXCITATION ON MULTIDIMENSIONAL TUNNELING - GENERAL STUDY AND PROTON TUNNELING IN TROPOLONE |
EFFECTS OF VIBRATIONAL-EXCITATION ON MULTIDIMENSIONAL TUNNELING - GENERAL STUDY AND PROTON TUNNELING IN TROPOLONE |
EFFECTS OF VIBRATIONAL-EXCITATION ON MULTIDIMENSIONAL TUNNELING - GENERAL STUDY AND PROTON TUNNELING IN TROPOLONE |
JOURNAL OF CHEMICAL PHYSICS, 102, 10, 3977-3992 |
JOURNAL OF CHEMICAL PHYSICS, 102, 10, 3977-3992 |
JOURNAL OF CHEMICAL PHYSICS, 102, 10, 3977-3992 |
1995/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| K MORIBAYASHI, S TAKADA, H NAKAMURA |
K MORIBAYASHI, S TAKADA, H NAKAMURA |
K MORIBAYASHI, S TAKADA, H NAKAMURA |
CONSTANT CENTRIFUGAL POTENTIAL APPROXIMATION FOR ATOM-DIATOM CHEMICAL-REACTION DYNAMICS |
CONSTANT CENTRIFUGAL POTENTIAL APPROXIMATION FOR ATOM-DIATOM CHEMICAL-REACTION DYNAMICS |
CONSTANT CENTRIFUGAL POTENTIAL APPROXIMATION FOR ATOM-DIATOM CHEMICAL-REACTION DYNAMICS |
JOURNAL OF CHEMICAL PHYSICS, 100, 6, 4284-4293 |
JOURNAL OF CHEMICAL PHYSICS, 100, 6, 4284-4293 |
JOURNAL OF CHEMICAL PHYSICS, 100, 6, 4284-4293 |
1994/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| S TAKADA, H NAKAMURA |
S TAKADA, H NAKAMURA |
S TAKADA, H NAKAMURA |
WENTZEL-KRAMERS-BRILLOUIN THEORY OF MULTIDIMENSIONAL TUNNELING - GENERAL-THEORY FOR ENERGY SPLITTING |
WENTZEL-KRAMERS-BRILLOUIN THEORY OF MULTIDIMENSIONAL TUNNELING - GENERAL-THEORY FOR ENERGY SPLITTING |
WENTZEL-KRAMERS-BRILLOUIN THEORY OF MULTIDIMENSIONAL TUNNELING - GENERAL-THEORY FOR ENERGY SPLITTING |
JOURNAL OF CHEMICAL PHYSICS, 100, 1, 98-113 |
JOURNAL OF CHEMICAL PHYSICS, 100, 1, 98-113 |
JOURNAL OF CHEMICAL PHYSICS, 100, 1, 98-113 |
1994/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| S. Takada, A. Ohsaki, H. Nakamura |
S. Takada, A. Ohsaki, H. Nakamura |
S TAKADA, A OHSAKI, H NAKAMURA |
Reaction dynamics of D+H<sub>2</sub> → DH+H: Effects of potential energy surface topography and usefulness of the constant centrifugal potential approximation |
Reaction dynamics of D+H<sub>2</sub> → DH+H: Effects of potential energy surface topography and usefulness of the constant centrifugal potential approximation |
REACTION DYNAMICS OF D + H2-]DH + H - EFFECTS OF POTENTIAL-ENERGY SURFACE-TOPOGRAPHY AND USEFULNESS OF THE CONSTANT CENTRIFUGAL POTENTIAL APPROXIMATION |
The Journal of Chemical Physics, 96, 1, 339-348 |
The Journal of Chemical Physics, 96, 1, 339-348 |
JOURNAL OF CHEMICAL PHYSICS, 96, 1, 339-348 |
1992/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
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