| 緒方 博之 |
緒方 博之 |
Hiroyuki Ogata |
Assessing the viral content of uncultured picoeukaryotes in the global-ocean by single cell genomics |
Assessing the viral content of uncultured picoeukaryotes in the global-ocean by single cell genomics |
Assessing the viral content of uncultured picoeukaryotes in the global-ocean by single cell genomics |
Cell, 177, 1109-1123 |
Cell, 177, 1109-1123 |
Cell, 177, 1109-1123 |
2019/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Aoki K., Hagiwara R., Akashi M., Murata K., Ogata H., Takemura M. |
Aoki K., Hagiwara R., Akashi M., Murata K., Ogata H., Takemura M. |
Aoki K., Hagiwara R., Akashi M., Murata K., Ogata H., Takemura M. |
Fifteen marseilleviruses newly isolated from three water samples in Japan reveal a local diversity of Marseilleviridae. |
Fifteen marseilleviruses newly isolated from three water samples in Japan reveal a local diversity of Marseilleviridae. |
Fifteen marseilleviruses newly isolated from three water samples in Japan reveal a local diversity of Marseilleviridae. |
Front. Microbiol, 10.3389 |
Front. Microbiol, 10.3389 |
Front. Microbiol, 10.3389 |
2019/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Yoshikawa G., Blanc-Mathieu R., Song C., Kayama Y., Mochizuki T., Murata K., Ogata H., Takemura M. |
Yoshikawa G., Blanc-Mathieu R., Song C., Kayama Y., Mochizuki T., Murata K., Ogata H., Takemura M. |
Yoshikawa G., Blanc-Mathieu R., Song C., Kayama Y., Mochizuki T., Murata K., Ogata H., Takemura M. |
Medusavirus, a novel large DNA virus discovered from hot spring water. |
Medusavirus, a novel large DNA virus discovered from hot spring water. |
Medusavirus, a novel large DNA virus discovered from hot spring water. |
J. Virol., 93, e02130-18 |
J. Virol., 93, e02130-18 |
J. Virol., 93, e02130-18 |
2019/04 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Gregory A.C., Zayed A.A., Conceição-Neto N., Temperton B., Bolduc B., Alberti A., Ardyna M., Arkhipova K., Carmichael M., Cruaud C., Dimier C., Domínguez-Huerta G., Ferland J., Kandels S., Liu Y., Marec C., Pesant S., Picheral M., Pisarev S., Poulain J., Tremblay J.É., Vik D.; Tara Oceans Coordinators, Babin M., Bowler C., Culley A.I., de Vargas C., Dutilh B.E., Iudicone D., Karp-Boss L., Roux S., Sunagawa S., Wincker P., Sullivan M.B. |
Gregory A.C., Zayed A.A., Conceição-Neto N., Temperton B., Bolduc B., Alberti A., Ardyna M., Arkhipova K., Carmichael M., Cruaud C., Dimier C., Domínguez-Huerta G., Ferland J., Kandels S., Liu Y., Marec C., Pesant S., Picheral M., Pisarev S., Poulain J., Tremblay J.É., Vik D.; Tara Oceans Coordinators, Babin M., Bowler C., Culley A.I., de Vargas C., Dutilh B.E., Iudicone D., Karp-Boss L., Roux S., Sunagawa S., Wincker P., Sullivan M.B. |
Gregory A.C., Zayed A.A., Conceição-Neto N., Temperton B., Bolduc B., Alberti A., Ardyna M., Arkhipova K., Carmichael M., Cruaud C., Dimier C., Domínguez-Huerta G., Ferland J., Kandels S., Liu Y., Marec C., Pesant S., Picheral M., Pisarev S., Poulain J., Tremblay J.É., Vik D.; Tara Oceans Coordinators, Babin M., Bowler C., Culley A.I., de Vargas C., Dutilh B.E., Iudicone D., Karp-Boss L., Roux S., Sunagawa S., Wincker P., Sullivan M.B. |
Marine DNA viral macro- and microdiversity from pole to pole. |
Marine DNA viral macro- and microdiversity from pole to pole. |
Marine DNA viral macro- and microdiversity from pole to pole. |
Cell. pii: S0092-8674(19), 30341-1 |
Cell. pii: S0092-8674(19), 30341-1 |
Cell. pii: S0092-8674(19), 30341-1 |
2019/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Caputi L., Carradec Q., Eveillard D., Kirilovsky A., Pelletier, Pierella Karlusich J.J., Vieira F.R.J., Villar E., Chaffron S., Malviya S., Scalco E., Acinas S.G., Alberti A., Aury J.-M., Benoiston A.-S., Bertrand A., Biard T., Bittner L., Boccara M., Brum J.R., Brunet C., Busseni G., Carratala A., Claustre H., Coelho L.P., Colin S., D’Aniello S., Da Silva C., Del Core M., Dore H., Gasparini S., Kokoszka F., Jamet J.-L., Lejeusne C., Lepoivre C., Lescot M., Lima-Mendez G., Lombard F., Lukes J., Maillet N., Madoui M.-A., Martinez E., Mazzocchi M.G., Neou M.B., Paz-Yepes J., Poulain J., Ramondenc S., Romagnan J.-B., Roux S., Manta D.S., Sanges R., Speich S., Sprovieri M., Sunagawa S., Taillander V., Tanaka A., Tirichine L., Trottier C., Uitz J., Veluchamy A., Vesela J., Vincent F., Yau S., Kandels-Lewis S., Searson S., Dimier C., Picheral M., Tara Oceans Coordinators, Bork P., Boss E., de Vargas C., Follows M.J., Grimsley N., Guidi L., Hingamp P., Karsenti E., Sordino P., Stemmann L., Sullivan M.B., Tagliabue A., Zingone A., Garczarek L., d’Ortenzio F., Testor P., Not F., Ribera d’Alcala M., Wincker P., Bowler C., Iudicone D. |
Caputi L., Carradec Q., Eveillard D., Kirilovsky A., Pelletier, Pierella Karlusich J.J., Vieira F.R.J., Villar E., Chaffron S., Malviya S., Scalco E., Acinas S.G., Alberti A., Aury J.-M., Benoiston A.-S., Bertrand A., Biard T., Bittner L., Boccara M., Brum J.R., Brunet C., Busseni G., Carratala A., Claustre H., Coelho L.P., Colin S., D’Aniello S., Da Silva C., Del Core M., Dore H., Gasparini S., Kokoszka F., Jamet J.-L., Lejeusne C., Lepoivre C., Lescot M., Lima-Mendez G., Lombard F., Lukes J., Maillet N., Madoui M.-A., Martinez E., Mazzocchi M.G., Neou M.B., Paz-Yepes J., Poulain J., Ramondenc S., Romagnan J.-B., Roux S., Manta D.S., Sanges R., Speich S., Sprovieri M., Sunagawa S., Taillander V., Tanaka A., Tirichine L., Trottier C., Uitz J., Veluchamy A., Vesela J., Vincent F., Yau S., Kandels-Lewis S., Searson S., Dimier C., Picheral M., Tara Oceans Coordinators, Bork P., Boss E., de Vargas C., Follows M.J., Grimsley N., Guidi L., Hingamp P., Karsenti E., Sordino P., Stemmann L., Sullivan M.B., Tagliabue A., Zingone A., Garczarek L., d’Ortenzio F., Testor P., Not F., Ribera d’Alcala M., Wincker P., Bowler C., Iudicone D. |
Caputi L., Carradec Q., Eveillard D., Kirilovsky A., Pelletier, Pierella Karlusich J.J., Vieira F.R.J., Villar E., Chaffron S., Malviya S., Scalco E., Acinas S.G., Alberti A., Aury J.-M., Benoiston A.-S., Bertrand A., Biard T., Bittner L., Boccara M., Brum J.R., Brunet C., Busseni G., Carratala A., Claustre H., Coelho L.P., Colin S., D’Aniello S., Da Silva C., Del Core M., Dore H., Gasparini S., Kokoszka F., Jamet J.-L., Lejeusne C., Lepoivre C., Lescot M., Lima-Mendez G., Lombard F., Lukes J., Maillet N., Madoui M.-A., Martinez E., Mazzocchi M.G., Neou M.B., Paz-Yepes J., Poulain J., Ramondenc S., Romagnan J.-B., Roux S., Manta D.S., Sanges R., Speich S., Sprovieri M., Sunagawa S., Taillander V., Tanaka A., Tirichine L., Trottier C., Uitz J., Veluchamy A., Vesela J., Vincent F., Yau S., Kandels-Lewis S., Searson S., Dimier C., Picheral M., Tara Oceans Coordinators, Bork P., Boss E., de Vargas C., Follows M.J., Grimsley N., Guidi L., Hingamp P., Karsenti E., Sordino P., Stemmann L., Sullivan M.B., Tagliabue A., Zingone A., Garczarek L., d’Ortenzio F., Testor P., Not F., Ribera d’Alcala M., Wincker P., Bowler C., Iudicone D. |
Community-level responses to iron availability in open ocean planktonic ecosystems. |
Community-level responses to iron availability in open ocean planktonic ecosystems. |
Community-level responses to iron availability in open ocean planktonic ecosystems. |
Global Biogeochem. Cycles, 33, 391-419 |
Global Biogeochem. Cycles, 33, 391-419 |
Global Biogeochem. Cycles, 33, 391-419 |
2019/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Roux S., Adriaenssens E.M., Dutilh B.E., Koonin E.V., Kropinski A.M., Krupovic M., Kuhn J.H., Lavigne R., Brister J.R., Varsani A., Amid C., Aziz R.K., Bordenstein S.R., Bork P., Breitbart M., Cochrane G.R., Daly R.A., Desnues C., Duhaime M.B., Emerson J.B., Enault F., Fuhrman J.A., Hingamp P., Hugenholtz P., Hurwitz B.L., Ivanova N.N., Labonte J.M., Lee K.-B., Malmstrom R.R., Martinez-Garcia M., Mizrachi I., Ogata H., Paez-Espino D., Petit M.-A., Putonti C., Rattei T., Reyes A., Rodriguez-Valera F., Rosario K., Schriml L., Schulz F., Steward G.F., Sullivan M.B., Sunagawa S., Suttle C.A., Temperton B., Tringe S.G., Vega Thurber R., Webster N.S., Whiteson K.L., Wilhelm S.W., Wommack K.E., Woyke T., Wrighton K., Yilmaz P., Yoshida T., Young M.J., Yutin N., Allen L.Z., Kyrpides N.C., and Eloe-Fadrosh E.A. |
Roux S., Adriaenssens E.M., Dutilh B.E., Koonin E.V., Kropinski A.M., Krupovic M., Kuhn J.H., Lavigne R., Brister J.R., Varsani A., Amid C., Aziz R.K., Bordenstein S.R., Bork P., Breitbart M., Cochrane G.R., Daly R.A., Desnues C., Duhaime M.B., Emerson J.B., Enault F., Fuhrman J.A., Hingamp P., Hugenholtz P., Hurwitz B.L., Ivanova N.N., Labonte J.M., Lee K.-B., Malmstrom R.R., Martinez-Garcia M., Mizrachi I., Ogata H., Paez-Espino D., Petit M.-A., Putonti C., Rattei T., Reyes A., Rodriguez-Valera F., Rosario K., Schriml L., Schulz F., Steward G.F., Sullivan M.B., Sunagawa S., Suttle C.A., Temperton B., Tringe S.G., Vega Thurber R., Webster N.S., Whiteson K.L., Wilhelm S.W., Wommack K.E., Woyke T., Wrighton K., Yilmaz P., Yoshida T., Young M.J., Yutin N., Allen L.Z., Kyrpides N.C., and Eloe-Fadrosh E.A. |
Roux S., Adriaenssens E.M., Dutilh B.E., Koonin E.V., Kropinski A.M., Krupovic M., Kuhn J.H., Lavigne R., Brister J.R., Varsani A., Amid C., Aziz R.K., Bordenstein S.R., Bork P., Breitbart M., Cochrane G.R., Daly R.A., Desnues C., Duhaime M.B., Emerson J.B., Enault F., Fuhrman J.A., Hingamp P., Hugenholtz P., Hurwitz B.L., Ivanova N.N., Labonte J.M., Lee K.-B., Malmstrom R.R., Martinez-Garcia M., Mizrachi I., Ogata H., Paez-Espino D., Petit M.-A., Putonti C., Rattei T., Reyes A., Rodriguez-Valera F., Rosario K., Schriml L., Schulz F., Steward G.F., Sullivan M.B., Sunagawa S., Suttle C.A., Temperton B., Tringe S.G., Vega Thurber R., Webster N.S., Whiteson K.L., Wilhelm S.W., Wommack K.E., Woyke T., Wrighton K., Yilmaz P., Yoshida T., Young M.J., Yutin N., Allen L.Z., Kyrpides N.C., and Eloe-Fadrosh E.A. |
Minimum Information about Uncultivated Virus Genomes (MIUViG): a community consensus on standards and best practices for describing genome sequences from uncultivated viruses. |
Minimum Information about Uncultivated Virus Genomes (MIUViG): a community consensus on standards and best practices for describing genome sequences from uncultivated viruses. |
Minimum Information about Uncultivated Virus Genomes (MIUViG): a community consensus on standards and best practices for describing genome sequences from uncultivated viruses. |
Nat. Biotechnol., 37, 29-37 |
Nat. Biotechnol., 37, 29-37 |
Nat. Biotechnol., 37, 29-37 |
2019/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Inoue M., Nakamoto I., Omae K., Oguro T., Ogata H., Yoshida T., Sako Y. |
Inoue M., Nakamoto I., Omae K., Oguro T., Ogata H., Yoshida T., Sako Y. |
Inoue M., Nakamoto I., Omae K., Oguro T., Ogata H., Yoshida T., Sako Y. |
Structural and phylogenetic diversity of anaerobic carbon-monoxide dehydrogenases.  |
Structural and phylogenetic diversity of anaerobic carbon-monoxide dehydrogenases. |
Structural and phylogenetic diversity of anaerobic carbon-monoxide dehydrogenases. |
Front. Microbiol., 9, 3353 |
Front. Microbiol., 9, 3353 |
Front. Microbiol., 9, 3353 |
2019/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Piredda R., Claverie J.-M., Decelle J., de Vargas C., Dunthorn M., Edvardsen B., Eikrem W., Forster D., Kooistra W.H.C.F., Logares R., Massana R., Montresor M., Not F., Ogata H., Pawlowski J., Romac S., Sarno D., Stoeck T., Zingone A. |
Piredda R., Claverie J.-M., Decelle J., de Vargas C., Dunthorn M., Edvardsen B., Eikrem W., Forster D., Kooistra W.H.C.F., Logares R., Massana R., Montresor M., Not F., Ogata H., Pawlowski J., Romac S., Sarno D., Stoeck T., Zingone A. |
Piredda R., Claverie J.-M., Decelle J., de Vargas C., Dunthorn M., Edvardsen B., Eikrem W., Forster D., Kooistra W.H.C.F., Logares R., Massana R., Montresor M., Not F., Ogata H., Pawlowski J., Romac S., Sarno D., Stoeck T., Zingone A. |
Diatom diversity through HTS-metabarcoding in coastal European seas. |
Diatom diversity through HTS-metabarcoding in coastal European seas. |
Diatom diversity through HTS-metabarcoding in coastal European seas. |
Sci. Rep., 8, 18059 |
Sci. Rep., 8, 18059 |
Sci. Rep., 8, 18059 |
2018/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Li Y., Hingamp P., Watai H., Endo H., Yoshida T., Ogata H. |
Li Y., Hingamp P., Watai H., Endo H., Yoshida T., Ogata H. |
Li Y., Hingamp P., Watai H., Endo H., Yoshida T., Ogata H. |
Degenerate PCR primers to reveal the diversity of giant viruses in coastal waters. |
Degenerate PCR primers to reveal the diversity of giant viruses in coastal waters. |
Degenerate PCR primers to reveal the diversity of giant viruses in coastal waters. |
Viruses, 10, E496 |
Viruses, 10, E496 |
Viruses, 10, E496 |
2018/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Arai W., Taniguchi T., Goto S., Moriya Y., Uehara H., Takemoto K., Ogata H., Takami H. |
Arai W., Taniguchi T., Goto S., Moriya Y., Uehara H., Takemoto K., Ogata H., Takami H. |
Arai W., Taniguchi T., Goto S., Moriya Y., Uehara H., Takemoto K., Ogata H., Takami H. |
MAPLE 2.3.0: an improved system for evaluating the functionomes of genomes and metagenomes. |
MAPLE 2.3.0: an improved system for evaluating the functionomes of genomes and metagenomes. |
MAPLE 2.3.0: an improved system for evaluating the functionomes of genomes and metagenomes. |
Biosci. Biotechnol. Biochem., doi:10., 1080/09168451.2018.1476122 |
Biosci. Biotechnol. Biochem., doi:10., 1080/09168451.2018.1476122 |
Biosci. Biotechnol. Biochem., doi:10., 1080/09168451.2018.1476122 |
2018/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Yoshikawa G., Askora A., Blanc-Mathieu R., Kawasaki T., Li Y., Nakano M., Ogata H., Yamada T. |
Yoshikawa G., Askora A., Blanc-Mathieu R., Kawasaki T., Li Y., Nakano M., Ogata H., Yamada T. |
Yoshikawa G., Askora A., Blanc-Mathieu R., Kawasaki T., Li Y., Nakano M., Ogata H., Yamada T. |
Xanthomonas citri jumbo phage XacN1 exhibits a wide host range and high complement of tRNA genes. |
Xanthomonas citri jumbo phage XacN1 exhibits a wide host range and high complement of tRNA genes. |
Xanthomonas citri jumbo phage XacN1 exhibits a wide host range and high complement of tRNA genes. |
Sci. Rep., 8, 4486,, doi:10.1038/s41598-018-22239-3 |
Sci. Rep., 8, 4486,, doi:10.1038/s41598-018-22239-3 |
Sci. Rep., 8, 4486,, doi:10.1038/s41598-018-22239-3 |
2018 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Seeleuthner Y., Mondy S., Lombard V., Carradec Q., Pelletier E., Wessner M., Leconte J., Mangot J.F., Poulain J., Labadie K., Logares R., Sunagawa S., de Berardinis V., Salanoubat M., Dimier C., Kandels-Lewis S., Picheral M., Searson S., Tara Oceans Coordinators, Pesant S., Poulton N., Stepanauskas R., Bork P., Bowler C., Hingamp P., Sullivan M.B., Iudicone D., Massana R., Aury J.M., Henrissat B., Karsenti E., Jaillon O., Sieracki M., de Vargas C., Wincker P. |
Seeleuthner Y., Mondy S., Lombard V., Carradec Q., Pelletier E., Wessner M., Leconte J., Mangot J.F., Poulain J., Labadie K., Logares R., Sunagawa S., de Berardinis V., Salanoubat M., Dimier C., Kandels-Lewis S., Picheral M., Searson S., Tara Oceans Coordinators, Pesant S., Poulton N., Stepanauskas R., Bork P., Bowler C., Hingamp P., Sullivan M.B., Iudicone D., Massana R., Aury J.M., Henrissat B., Karsenti E., Jaillon O., Sieracki M., de Vargas C., Wincker P. |
Seeleuthner Y., Mondy S., Lombard V., Carradec Q., Pelletier E., Wessner M., Leconte J., Mangot J.F., Poulain J., Labadie K., Logares R., Sunagawa S., de Berardinis V., Salanoubat M., Dimier C., Kandels-Lewis S., Picheral M., Searson S., Tara Oceans Coordinators, Pesant S., Poulton N., Stepanauskas R., Bork P., Bowler C., Hingamp P., Sullivan M.B., Iudicone D., Massana R., Aury J.M., Henrissat B., Karsenti E., Jaillon O., Sieracki M., de Vargas C., Wincker P. |
Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans. |
Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans. |
Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans. |
Nat.Commun., 9,310, doi:10., 1038/s41467-017-02235-3 |
Nat.Commun., 9,310, doi:10., 1038/s41467-017-02235-3 |
Nat.Commun., 9,310, doi:10., 1038/s41467-017-02235-3 |
2018 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Carradec Q., Pelletier E., Da Silva C., Alberti A., Seeleuthner Y., Blanc-Mathieu R., Lima-Mendez G., Rocha F., Tirichine L., Labadie K., Kirilovsky A., Bertrand A., Engelen S., Madoui M.-A., Meheust R., Poulain J., Romac S., Richter D., Yoshikawa G., Dimier C., Kandels-Lewis S., Picheral M., Searson S., Tara Oceans Coordinators, Jaillon O., Aury J.-M., Karsenti E., Sullivan M.B., Sunagawa S., Bork P., Not F., Hingamp P., Raes J., Guidi L., Ogata H., de Vargas C., Iudicone D., Bowler C., Wincker P. |
Carradec Q., Pelletier E., Da Silva C., Alberti A., Seeleuthner Y., Blanc-Mathieu R., Lima-Mendez G., Rocha F., Tirichine L., Labadie K., Kirilovsky A., Bertrand A., Engelen S., Madoui M.-A., Meheust R., Poulain J., Romac S., Richter D., Yoshikawa G., Dimier C., Kandels-Lewis S., Picheral M., Searson S., Tara Oceans Coordinators, Jaillon O., Aury J.-M., Karsenti E., Sullivan M.B., Sunagawa S., Bork P., Not F., Hingamp P., Raes J., Guidi L., Ogata H., de Vargas C., Iudicone D., Bowler C., Wincker P. |
Carradec Q., Pelletier E., Da Silva C., Alberti A., Seeleuthner Y., Blanc-Mathieu R., Lima-Mendez G., Rocha F., Tirichine L., Labadie K., Kirilovsky A., Bertrand A., Engelen S., Madoui M.-A., Meheust R., Poulain J., Romac S., Richter D., Yoshikawa G., Dimier C., Kandels-Lewis S., Picheral M., Searson S., Tara Oceans Coordinators, Jaillon O., Aury J.-M., Karsenti E., Sullivan M.B., Sunagawa S., Bork P., Not F., Hingamp P., Raes J., Guidi L., Ogata H., de Vargas C., Iudicone D., Bowler C., Wincker P. |
A global ocean atlas of eukaryotic genes. |
A global ocean atlas of eukaryotic genes. |
A global ocean atlas of eukaryotic genes. |
Nat. Commun., 9,373, doi:10., 1038/s41467-017-02342-1 |
Nat. Commun., 9,373, doi:10., 1038/s41467-017-02342-1 |
Nat. Commun., 9,373, doi:10., 1038/s41467-017-02342-1 |
2018 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Hiroyuki Ogata |
Hiroyuki Ogata |
Hiroyuki Ogata |
Habitat Alterations by Viruses: Strategies by Tupanviruses and Others. |
Habitat Alterations by Viruses: Strategies by Tupanviruses and Others. |
Habitat Alterations by Viruses: Strategies by Tupanviruses and Others. |
Microbes Environ, 33, 117-119 |
Microbes Environ, 33, 117-119 |
Microbes Environ, 33, 117-119 |
2018 |
|
英語 |
研究論文(学術雑誌) |
公開 |
| Roux S., Adriaenssens E.M., Dutilh B.E., Koonin E.V., Kropinski A.M., Krupovic M., Kuhn J.H., Lavigne R., Brister J.R., Varsani A., Amid C., Aziz R.K., Bordenstein S.R., Bork P., Breitbart M., Cochrane G.R., Daly R.A., Desnues C., Duhaime M.B., Emerson J.B., Enault F., Fuhrman J.A., Hingamp P., Hugenholtz P., Hurwitz B.L., Ivanova N.N., Labonte J.M., Lee K.-B., Malmstrom R.R., Martinez-Garcia M., Mizrachi I., Ogata H., Paez-Espino D., Petit M.-A., Putonti C., Rattei T., Reyes A., Rodriguez-Valera F., Rosario K., Schriml L., Schulz F., Steward G.F., Sullivan M.B., Sunagawa S., Suttle C.A., Temperton B., Tringe S.G., Vega Thurber R., Webster N.S., Whiteson K.L., Wilhelm S.W., Wommack K.E., Woyke T., Wrighton K., Yilmaz P., Yoshida T., Young M.J., Yutin N., Allen L.Z., Kyrpides N.C., Eloe-Fadrosh E.A. |
Roux S., Adriaenssens E.M., Dutilh B.E., Koonin E.V., Kropinski A.M., Krupovic M., Kuhn J.H., Lavigne R., Brister J.R., Varsani A., Amid C., Aziz R.K., Bordenstein S.R., Bork P., Breitbart M., Cochrane G.R., Daly R.A., Desnues C., Duhaime M.B., Emerson J.B., Enault F., Fuhrman J.A., Hingamp P., Hugenholtz P., Hurwitz B.L., Ivanova N.N., Labonte J.M., Lee K.-B., Malmstrom R.R., Martinez-Garcia M., Mizrachi I., Ogata H., Paez-Espino D., Petit M.-A., Putonti C., Rattei T., Reyes A., Rodriguez-Valera F., Rosario K., Schriml L., Schulz F., Steward G.F., Sullivan M.B., Sunagawa S., Suttle C.A., Temperton B., Tringe S.G., Vega Thurber R., Webster N.S., Whiteson K.L., Wilhelm S.W., Wommack K.E., Woyke T., Wrighton K., Yilmaz P., Yoshida T., Young M.J., Yutin N., Allen L.Z., Kyrpides N.C., Eloe-Fadrosh E.A. |
Roux S., Adriaenssens E.M., Dutilh B.E., Koonin E.V., Kropinski A.M., Krupovic M., Kuhn J.H., Lavigne R., Brister J.R., Varsani A., Amid C., Aziz R.K., Bordenstein S.R., Bork P., Breitbart M., Cochrane G.R., Daly R.A., Desnues C., Duhaime M.B., Emerson J.B., Enault F., Fuhrman J.A., Hingamp P., Hugenholtz P., Hurwitz B.L., Ivanova N.N., Labonte J.M., Lee K.-B., Malmstrom R.R., Martinez-Garcia M., Mizrachi I., Ogata H., Paez-Espino D., Petit M.-A., Putonti C., Rattei T., Reyes A., Rodriguez-Valera F., Rosario K., Schriml L., Schulz F., Steward G.F., Sullivan M.B., Sunagawa S., Suttle C.A., Temperton B., Tringe S.G., Vega Thurber R., Webster N.S., Whiteson K.L., Wilhelm S.W., Wommack K.E., Woyke T., Wrighton K., Yilmaz P., Yoshida T., Young M.J., Yutin N., Allen L.Z., Kyrpides N.C., Eloe-Fadrosh E.A. |
Minimum Information about Uncultivated Virus Genomes (MIUViG): a community consensus on standards and best practices for describing genome sequences from uncultivated viruses. |
Minimum Information about Uncultivated Virus Genomes (MIUViG): a community consensus on standards and best practices for describing genome sequences from uncultivated viruses. |
Minimum Information about Uncultivated Virus Genomes (MIUViG): a community consensus on standards and best practices for describing genome sequences from uncultivated viruses. |
Nat. Biotechnol. |
|
Nat. Biotechnol. |
2018 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Endo H., Ogata H., Suzuki K. |
Endo H., Ogata H., Suzuki K. |
Endo H., Ogata H., Suzuki K. |
Contrasting biogeography and diversity patterns between diatoms and haptophytes in the central Pacific Ocean. |
Contrasting biogeography and diversity patterns between diatoms and haptophytes in the central Pacific Ocean. |
Contrasting biogeography and diversity patterns between diatoms and haptophytes in the central Pacific Ocean. |
Sci. Rep. |
Sci. Rep. |
Sci. Rep. |
2018 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Nishiyama H., Nagai T., Kudo M., Okazaki Y., Azuma Y., Watanabe T., Susumu G., Ogata H., Sakurai T. |
Nishiyama H., Nagai T., Kudo M., Okazaki Y., Azuma Y., Watanabe T., Susumu G., Ogata H., Sakurai T. |
Nishiyama H., Nagai T., Kudo M., Okazaki Y., Azuma Y., Watanabe T., Susumu G., Ogata H., Sakurai T. |
Supplementation of pancreatic digestive enzymes alters the composition of intestinal microbiota in mice. |
Supplementation of pancreatic digestive enzymes alters the composition of intestinal microbiota in mice. |
Supplementation of pancreatic digestive enzymes alters the composition of intestinal microbiota in mice. |
Biochem.Biophys.Res.Commun., 495, 1, 273-279 |
Biochem.Biophys.Res.Commun., 495, 1, 273-279 |
Biochem.Biophys.Res.Commun., 495, 1, 273-279 |
2018 |
有 |
英語 |
|
公開 |
| Yoshida T., Nishimura Y., Watai H., Haruki N., Morimoto D., Kaneko H., Honda T., Yamamoto K., Hingamp P., Sako Y., Goto S., Ogata H. |
Yoshida T., Nishimura Y., Watai H., Haruki N., Morimoto D., Kaneko H., Honda T., Yamamoto K., Hingamp P., Sako Y., Goto S., Ogata H. |
Yoshida T., Nishimura Y., Watai H., Haruki N., Morimoto D., Kaneko H., Honda T., Yamamoto K., Hingamp P., Sako Y., Goto S., Ogata H. |
Locality and diel cycling of viral production revealed by a 24 h time course cross-omics analysis in a coastal region of Japan. |
Locality and diel cycling of viral production revealed by a 24 h time course cross-omics analysis in a coastal region of Japan. |
Locality and diel cycling of viral production revealed by a 24 h time course cross-omics analysis in a coastal region of Japan. |
ISME J., doi:10., 1038/s41396-018-0052-x |
ISME J., doi:10., 1038/s41396-018-0052-x |
ISME J., doi:10., 1038/s41396-018-0052-x |
2018 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mihara T., Koyano H., Hingamp P., Grimsley N., Goto S., Ogata H. |
Mihara T., Koyano H., Hingamp P., Grimsley N., Goto S., Ogata H. |
Mihara T., Koyano H., Hingamp P., Grimsley N., Goto S., Ogata H. |
Taxon richness of "Megaviridae" exceeds those of Bacteria and Archaea in the ocean. |
Taxon richness of "Megaviridae" exceeds those of Bacteria and Archaea in the ocean. |
Taxon richness of "Megaviridae" exceeds those of Bacteria and Archaea in the ocean. |
Microbes Environ., doi:10., 1264/jsme2.ME17203 |
Microbes Environ., doi:10., 1264/jsme2.ME17203 |
Microbes Environ., doi:10., 1264/jsme2.ME17203 |
2018 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Shimizu Y., Ogata H., Goto S. |
Shimizu Y., Ogata H., Goto S. |
Shimizu Y., Ogata H., Goto S. |
Type III polyketide synthases: functional classification and phylogenomics |
Type III polyketide synthases: functional classification and phylogenomics |
Type III polyketide synthases: functional classification and phylogenomics |
ChemBioChem, 18, 50-65 |
ChemBioChem, 18, 50-65 |
ChemBioChem, 18, 50-65 |
2017 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| 緒方 博之 |
緒方 博之 |
Hiroyuki Ogata |
Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition. |
Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition. |
Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition. |
Sci.Date, 4, 170093 |
Sci.Date, 4, 170093 |
Sci.Date, 4, 170093 |
2017 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| 武村政春, 緒方博之 |
武村政春, 緒方博之 |
武村政春, 緒方博之 |
【特集にあたって】知られざるウイルスの世界をあばく |
【特集にあたって】知られざるウイルスの世界をあばく |
【特集にあたって】知られざるウイルスの世界をあばく |
生物の科学 遺伝, 69, 264-267 |
生物の科学 遺伝, 69, 264-267 |
生物の科学 遺伝, 69, 264-267 |
2015 |
|
日本語 |
|
公開 |
| 三原知子, 五斗進, 緒方博之 |
三原知子, 五斗進, 緒方博之 |
三原知子, 五斗進, 緒方博之 |
海洋巨大ウイルス―ゲノムから見えたきた多様性と生態 |
海洋巨大ウイルス―ゲノムから見えたきた多様性と生態 |
海洋巨大ウイルス―ゲノムから見えたきた多様性と生態 |
生物の科学 遺伝, 69, 318-325 |
生物の科学 遺伝, 69, 318-325 |
生物の科学 遺伝, 69, 318-325 |
2015 |
|
日本語 |
|
公開 |
| 緒方博之, 武村政春 |
緒方博之, 武村政春 |
緒方博之, 武村政春 |
巨大ウイルスがもたらしたパンドラの箱 |
巨大ウイルスがもたらしたパンドラの箱 |
巨大ウイルスがもたらしたパンドラの箱 |
生物の科学 遺伝, 68, 194-199 |
生物の科学 遺伝, 68, 194-199 |
生物の科学 遺伝, 68, 194-199 |
2014 |
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日本語 |
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公開 |
| 緒方博之 |
緒方博之 |
Ogata H. |
フランスのバイオインフォマティクス事情 |
フランスのバイオインフォマティクス事情 |
Bioinformatics in France. |
Japanese Society for Bioinformatics News Letter, 11 |
Japanese Society for Bioinformatics News Letter, 11 |
Japanese Society for Bioinformatics News Letter, 11 |
2005 |
有 |
日本語 |
|
公開 |
| Ogata H. |
Ogata H. |
Ogata H. |
Other sequence analysis tools. |
Other sequence analysis tools. |
Other sequence analysis tools. |
Introduction to GenomeNet Databases, 2nd edition |
Introduction to GenomeNet Databases, 2nd edition |
Introduction to GenomeNet Databases, 2nd edition |
1998 |
有 |
英語 |
|
公開 |
| 緒方博之、金久實 |
緒方博之、金久實 |
Ogata H, Kanehisa M. |
タンパク質データベース利用による機能解析 |
タンパク質データベース利用による機能解析 |
Function analysis using protein databases. |
生物物理, 36, 152-154 |
生物物理, 36, 152-154 |
Biophysics, 36, 152-154 |
1996 |
有 |
英語 |
|
公開 |
| 緒方博之、金久實 |
緒方博之、金久實 |
Ogata H, Kanehisa M. |
ホモロジーサーチ |
ホモロジーサーチ |
Homology search. |
炎症と免疫, 3, 423-429 |
炎症と免疫, 3, 423-429 |
Inflammation & Immunology, 3, 423-429 |
1995 |
有 |
英語 |
|
公開 |
| Shimizu Y., Ogata H., Goto S. |
|
Shimizu Y., Ogata H., Goto S. |
Discriminating the reaction types of plant type III polyketide synthases |
|
Discriminating the reaction types of plant type III polyketide synthases |
Bioinformatics |
|
Bioinformatics |
2017/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Nishimura Y., Yoshida T., Kuronishi M., Uehara H., Ogata H., Goto S. |
|
Nishimura Y., Yoshida T., Kuronishi M., Uehara H., Ogata H., Goto S. |
ViPTree: the viral proteomic tree server |
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ViPTree: the viral proteomic tree server |
Bioinformatics |
|
Bioinformatics |
2017/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Nishimura Y., Watai H., Honda T., Mihara T., Omae K., Roux S., Blanc-Mathieu R., Yamamoto K., Hingamp P., Sako Y., Sullivan M.B., Goto S., Ogata H., Yoshida T. |
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Nishimura Y., Watai H., Honda T., Mihara T., Omae K., Roux S., Blanc-Mathieu R., Yamamoto K., Hingamp P., Sako Y., Sullivan M.B., Goto S., Ogata H., Yoshida T. |
Environmental viral genomes shed new light on virus-host interactions in the ocean |
|
Environmental viral genomes shed new light on virus-host interactions in the ocean |
mSphere, 2, e00359-16 |
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mSphere, 2, e00359-16 |
2017 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Matsui T., Yoshikawa G.,, Mihara T., Chatchawankanphanich O., Kawasaki T., Nakano M., Fujie M., Ogata H., Yamada T. |
|
Matsui T., Yoshikawa G.,, Mihara T., Chatchawankanphanich O., Kawasaki T., Nakano M., Fujie M., Ogata H., Yamada T. |
Replications of two closely related groups of jumbo phages show different level of dependence on host-encoded RNA polymerase |
|
Replications of two closely related groups of jumbo phages show different level of dependence on host-encoded RNA polymerase |
Front. Microbiol., 8, 1010 |
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Front. Microbiol., 8, 1010 |
2017 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Roux S., Brum J.R., Dutilh B.E., Sunagawa S., Duhaime M.B., Loy A., Poulos B.T., Solonenko N., Lara E., Poulain J., Pesant S., Kandels-Lewis S., Dimier C., Picheral M., Searson S., Cruaud C., Alberti A., Duarte C.M., Gasol J.M., Vaque D.; Tara Oceans Coordinators, Bork P., Acinas S.G., Wincker P., Sullivan M.B. |
|
Roux S., Brum J.R., Dutilh B.E., Sunagawa S., Duhaime M.B., Loy A., Poulos B.T., Solonenko N., Lara E., Poulain J., Pesant S., Kandels-Lewis S., Dimier C., Picheral M., Searson S., Cruaud C., Alberti A., Duarte C.M., Gasol J.M., Vaque D.; Tara Oceans Coordinators, Bork P., Acinas S.G., Wincker P., Sullivan M.B. |
Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses |
|
Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses |
Nature, 537, 689-693 |
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Nature, 537, 689-693 |
2016 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mihara T., Nasr-Eldin M.A., Chatchawankanphanich O., Bhunchoth A., Phironrit N., Kawasaki T., Nakano M., Fujie M., Ogata H., Yamada T. |
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Mihara T., Nasr-Eldin M.A., Chatchawankanphanich O., Bhunchoth A., Phironrit N., Kawasaki T., Nakano M., Fujie M., Ogata H., Yamada T. |
A Ralstonia solanacearum phage phiRP15 is closely related to Viunalikeviruses and encodes 19 tRNA-related sequences |
|
A Ralstonia solanacearum phage phiRP15 is closely related to Viunalikeviruses and encodes 19 tRNA-related sequences |
Virol. Rep., 6, 61-73 |
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Virol. Rep., 6, 61-73 |
2016 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Lescot M., Hingamp P., Kojima K.K., Villar E., Romac S., Veluchamy A., Boccara M., Jaillon O., Iudicone D., Bowler C., Wincker P., Claverie J.-M., Ogata H. |
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Lescot M., Hingamp P., Kojima K.K., Villar E., Romac S., Veluchamy A., Boccara M., Jaillon O., Iudicone D., Bowler C., Wincker P., Claverie J.-M., Ogata H. |
Reverse transcriptase genes are highly abundant and transcriptionally active in marine plankton assemblages |
|
Reverse transcriptase genes are highly abundant and transcriptionally active in marine plankton assemblages |
ISME J., 10, 1134-1146 |
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ISME J., 10, 1134-1146 |
2016 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Guidi L., Chaffron S., Bittner L., Eveillard D., Larhlimi A., Roux S., Darzi Y., Audic S., Berline L., Brum J., Coelho L.P., Espinoza J.C., Malviya S., Sunagawa S., Dimier C., Kandels-Lewis S., Picheral M., Poulain J., Searson S.; Tara Oceans Consortium Coordinators, Stemmann L., Not F., Hingamp P., Speich S., Follows M., Karp-Boss L., Boss E., Ogata H., Pesant S., Weissenbach J., Wincker P., Acinas S.G., Bork P., de Vargas C., Iudicone D., Sullivan M.B., Raes J., Karsenti E., Bowler C., Gorsky G. |
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Guidi L., Chaffron S., Bittner L., Eveillard D., Larhlimi A., Roux S., Darzi Y., Audic S., Berline L., Brum J., Coelho L.P., Espinoza J.C., Malviya S., Sunagawa S., Dimier C., Kandels-Lewis S., Picheral M., Poulain J., Searson S.; Tara Oceans Consortium Coordinators, Stemmann L., Not F., Hingamp P., Speich S., Follows M., Karp-Boss L., Boss E., Ogata H., Pesant S., Weissenbach J., Wincker P., Acinas S.G., Bork P., de Vargas C., Iudicone D., Sullivan M.B., Raes J., Karsenti E., Bowler C., Gorsky G. |
Plankton networks driving carbon export in the oligotrophic ocean |
|
Plankton networks driving carbon export in the oligotrophic ocean |
Nature, 532, 465-470 |
, 532, 465-470 |
Nature, 532, 465-470 |
2016 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Blanc-Mathieu R., Ogata H. |
|
Blanc-Mathieu R., Ogata H. |
DNA repair genes in the Megavirales pangenome |
|
DNA repair genes in the Megavirales pangenome |
Curr. Opin. Microbiol., 31, 94-100 |
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Curr. Opin. Microbiol., 31, 94-100 |
2016 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mihara T., Nishimura Y., Shimizu Y., Nishiyama H., Yoshikawa G., Uehara H., Hingamp P., Goto S, Ogata H. |
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Mihara T., Nishimura Y., Shimizu Y., Nishiyama H., Yoshikawa G., Uehara H., Hingamp P., Goto S, Ogata H. |
Linking virus genomes with host taxonomy |
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Linking virus genomes with host taxonomy |
Viruses, 8, 66 |
, 8, 66 |
Viruses, 8, 66 |
2016 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Bhunchoth A., Blanc-Mathieu R., Mihara T., Nishimura Y, Askora A., Phironrit N., Leksomboon C., Chatchawankanphanich O., Kawasaki T., Nakano M., Fujie M., Ogata H., Yamada Y. |
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Bhunchoth A., Blanc-Mathieu R., Mihara T., Nishimura Y, Askora A., Phironrit N., Leksomboon C., Chatchawankanphanich O., Kawasaki T., Nakano M., Fujie M., Ogata H., Yamada Y. |
Two asian jumbo phages, phiRSL2 and phiRSF1, infect Ralstonia solanacearum and show common features of phiKZ-related phages |
|
Two asian jumbo phages, phiRSL2 and phiRSF1, infect Ralstonia solanacearum and show common features of phiKZ-related phages |
Virology, 494, 56-66 |
, 494, 56-66 |
Virology, 494, 56-66 |
2016 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Forster D., Dunthorn M., Mahe F., Dolan J.R., Audic S., Bass D., Bittner L., Boutte C., Christen R., Claverie J.-M., Decelle J., Edvardsen B., Egge E., Eikrem W., Gobet A., Kooistra W.H.C.F., Logares R., Massana R., Montresor M., Not F., Ogata H., Pawlowski J., Pernice M.C., Romac S., Shalchian-Tabrizi K., Simon N., Richards T.A., Santini S., Sarno D., Siano R., Vaulot D., Wincker P., Zingone A., de Vargas C., Stoeck T. |
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Forster D., Dunthorn M., Mahe F., Dolan J.R., Audic S., Bass D., Bittner L., Boutte C., Christen R., Claverie J.-M., Decelle J., Edvardsen B., Egge E., Eikrem W., Gobet A., Kooistra W.H.C.F., Logares R., Massana R., Montresor M., Not F., Ogata H., Pawlowski J., Pernice M.C., Romac S., Shalchian-Tabrizi K., Simon N., Richards T.A., Santini S., Sarno D., Siano R., Vaulot D., Wincker P., Zingone A., de Vargas C., Stoeck T. |
Benthic protists: the under-charted majority |
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Benthic protists: the under-charted majority |
FEMS Microbiol. Ecol., 92 |
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FEMS Microbiol. Ecol., 92 |
2016 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| von Dassow P, John U, Ogata H, Probert I, Bendif EM, Kegel JU, Audic S, Wincker P, Da Silva C, Claverie JM, Doney S, Glover DM, Flores DM, Herrera Y, Lescot M, Garet-Delmas MJ, de Vargas C. |
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von Dassow P, John U, Ogata H, Probert I, Bendif EM, Kegel JU, Audic S, Wincker P, Da Silva C, Claverie JM, Doney S, Glover DM, Flores DM, Herrera Y, Lescot M, Garet-Delmas MJ, de Vargas C. |
Life-cycle modification in open oceans accounts for genome variability in a cosmopolitan phytoplankton. |
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Life-cycle modification in open oceans accounts for genome variability in a cosmopolitan phytoplankton. |
ISME J, 9, 1365-1377 |
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ISME J, 9, 1365-1377 |
2015/06 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Pesant S, Not F, Picheral M, Kandels-Lewis S, Le Bescot N, Gorsky G, Iudicone D, Karsenti E, Speich S, Trouble R, Dimier C, Searson S. |
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Pesant S, Not F, Picheral M, Kandels-Lewis S, Le Bescot N, Gorsky G, Iudicone D, Karsenti E, Speich S, Trouble R, Dimier C, Searson S. |
Open science resources for the discovery and analysis of Tara Oceans data. |
|
Open science resources for the discovery and analysis of Tara Oceans data. |
Sci Data, 2, 150023-150023 |
, 2, 150023-150023 |
Sci Data, 2, 150023-150023 |
2015/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Sunagawa S, Coelho LP, Chaffron S, Kultima JR, Labadie K, Salazar G, Djahanschiri B, Zeller G, Mende DR, Alberti A, Cornejo-Castillo FM, Costea PI, Cruaud C, d'Ovidio F, Engelen S, Ferrera I, Gasol JM, Guidi L, Hildebrand F, Kokoszka F, Lepoivre C, Lima-Mendez G, Poulain J, Poulos BT, Royo-Llonch M, Sarmento H, Vieira-Silva S, Dimier C, Picheral M, Searson S, Kandels-Lewis S, Bowler C, de Vargas C, Gorsky G, Grimsley N, Hingamp P, Iudicone D, Jaillon O, Not F, Ogata H, Pesant S, Speich S, Stemmann L, Sullivan MB, Weissenbach J, Wincker P, Karsenti E, Raes J, Acinas SG, Bork P. |
|
Sunagawa S, Coelho LP, Chaffron S, Kultima JR, Labadie K, Salazar G, Djahanschiri B, Zeller G, Mende DR, Alberti A, Cornejo-Castillo FM, Costea PI, Cruaud C, d'Ovidio F, Engelen S, Ferrera I, Gasol JM, Guidi L, Hildebrand F, Kokoszka F, Lepoivre C, Lima-Mendez G, Poulain J, Poulos BT, Royo-Llonch M, Sarmento H, Vieira-Silva S, Dimier C, Picheral M, Searson S, Kandels-Lewis S, Bowler C, de Vargas C, Gorsky G, Grimsley N, Hingamp P, Iudicone D, Jaillon O, Not F, Ogata H, Pesant S, Speich S, Stemmann L, Sullivan MB, Weissenbach J, Wincker P, Karsenti E, Raes J, Acinas SG, Bork P. |
Ocean plankton. Structure and function of the global ocean microbiome. |
|
Ocean plankton. Structure and function of the global ocean microbiome. |
Science, 348, 1261359-1261359 |
, 348, 1261359-1261359 |
Science, 348, 1261359-1261359 |
2015/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Villar E, Farrant GK, Follows M, Garczarek L, Speich S, Audic S, Bittner L, Blanke B, Brum JR, Brunet C, Casotti R, Chase A, Dolan JR, d'Ortenzio F, Gattuso JP, Grima N, Guidi L, Hill CN, Jahn O, Jamet JL, Le Goff H, Lepoivre C, Malviya S, Pelletier E, Romagnan JB, Roux S, Santini S, Scalco E, Schwenck SM, Tanaka A, Testor P, Vannier T, Vincent F, Zingone A, Dimier C, Picheral M, Searson S, Kandels-Lewis S, Acinas SG, Bork P, Boss E, de Vargas C, Gorsky G, Ogata H, Pesant S, Sullivan MB, Sunagawa S, Wincker P, Karsenti E, Bowler C, Not F, Hingamp P, Iudicone D. |
|
Villar E, Farrant GK, Follows M, Garczarek L, Speich S, Audic S, Bittner L, Blanke B, Brum JR, Brunet C, Casotti R, Chase A, Dolan JR, d'Ortenzio F, Gattuso JP, Grima N, Guidi L, Hill CN, Jahn O, Jamet JL, Le Goff H, Lepoivre C, Malviya S, Pelletier E, Romagnan JB, Roux S, Santini S, Scalco E, Schwenck SM, Tanaka A, Testor P, Vannier T, Vincent F, Zingone A, Dimier C, Picheral M, Searson S, Kandels-Lewis S, Acinas SG, Bork P, Boss E, de Vargas C, Gorsky G, Ogata H, Pesant S, Sullivan MB, Sunagawa S, Wincker P, Karsenti E, Bowler C, Not F, Hingamp P, Iudicone D. |
Ocean plankton. Environmental characteristics of Agulhas rings affect interocean plankton transport. |
|
Ocean plankton. Environmental characteristics of Agulhas rings affect interocean plankton transport. |
Science, 348, 1261447-1261447 |
, 348, 1261447-1261447 |
Science, 348, 1261447-1261447 |
2015/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Brum JR, Ignacio-Espinoza JC, Roux S, Doulcier G, Acinas SG, Alberti A, Chaffron S, Cruaud C, de Vargas C, Gasol JM, Gorsky G, Gregory AC, Guidi L, Hingamp P, Iudicone D, Not F, Ogata H, Pesant S, Poulos BT, Schwenck SM, Speich S, Dimier C, Kandels-Lewis S, Picheral M, Searson S, Bork P, Bowler C, Sunagawa S, Wincker P, Karsenti E, Sullivan MB. |
|
Brum JR, Ignacio-Espinoza JC, Roux S, Doulcier G, Acinas SG, Alberti A, Chaffron S, Cruaud C, de Vargas C, Gasol JM, Gorsky G, Gregory AC, Guidi L, Hingamp P, Iudicone D, Not F, Ogata H, Pesant S, Poulos BT, Schwenck SM, Speich S, Dimier C, Kandels-Lewis S, Picheral M, Searson S, Bork P, Bowler C, Sunagawa S, Wincker P, Karsenti E, Sullivan MB. |
Ocean plankton. Patterns and ecological drivers of ocean viral communities. |
|
Ocean plankton. Patterns and ecological drivers of ocean viral communities. |
Science, 348, 1261498-1261498 |
, 348, 1261498-1261498 |
Science, 348, 1261498-1261498 |
2015/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| de Vargas C, Audic S, Henry N, Decelle J, Mahe F, Logares R, Lara E, Berney C, Le Bescot N, Probert I, Carmichael M, Poulain J, Romac S, Colin S, Aury JM, Bittner L, Chaffron S, Dunthorn M, Engelen S, Flegontova O, Guidi L, Horak A, Jaillon O, Lima-Mendez G, Lukes J, Malviya S, Morard R, Mulot M, Scalco E, Siano R, Vincent F, Zingone A, Dimier C, Picheral M, Searson S, Kandels-Lewis S, Acinas SG, Bork P, Bowler C, Gorsky G, Grimsley N, Hingamp P, Iudicone D, Not F, Ogata H, Pesant S, Raes J, Sieracki ME, Speich S, Stemmann L, Sunagawa S, Weissenbach J, Wincker P, Karsenti E. |
|
de Vargas C, Audic S, Henry N, Decelle J, Mahe F, Logares R, Lara E, Berney C, Le Bescot N, Probert I, Carmichael M, Poulain J, Romac S, Colin S, Aury JM, Bittner L, Chaffron S, Dunthorn M, Engelen S, Flegontova O, Guidi L, Horak A, Jaillon O, Lima-Mendez G, Lukes J, Malviya S, Morard R, Mulot M, Scalco E, Siano R, Vincent F, Zingone A, Dimier C, Picheral M, Searson S, Kandels-Lewis S, Acinas SG, Bork P, Bowler C, Gorsky G, Grimsley N, Hingamp P, Iudicone D, Not F, Ogata H, Pesant S, Raes J, Sieracki ME, Speich S, Stemmann L, Sunagawa S, Weissenbach J, Wincker P, Karsenti E. |
Ocean plankton. Eukaryotic plankton diversity in the sunlit ocean. |
|
Ocean plankton. Eukaryotic plankton diversity in the sunlit ocean. |
Science, 348, 1261605-1261605 |
, 348, 1261605-1261605 |
Science, 348, 1261605-1261605 |
2015/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Lima-Mendez G, Faust K, Henry N, Decelle J, Colin S, Carcillo F, Chaffron S, Ignacio-Espinosa JC, Roux S, Vincent F, Bittner L, Darzi Y, Wang J, Audic S, Berline L, Bontempi G, Cabello AM, Coppola L, Cornejo-Castillo FM, d'Ovidio F, De Meester L, Ferrera I, Garet-Delmas MJ, Guidi L, Lara E, Pesant S, Royo-Llonch M, Salazar G, Sanchez P, Sebastian M, Souffreau C, Dimier C, Picheral M, Searson S, Kandels-Lewis S, Gorsky G, Not F, Ogata H, Speich S, Stemmann L, Weissenbach J, Wincker P, Acinas SG, Sunagawa S, Bork P, Sullivan MB, Karsenti E, Bowler C, de Vargas C, Raes J. |
|
Lima-Mendez G, Faust K, Henry N, Decelle J, Colin S, Carcillo F, Chaffron S, Ignacio-Espinosa JC, Roux S, Vincent F, Bittner L, Darzi Y, Wang J, Audic S, Berline L, Bontempi G, Cabello AM, Coppola L, Cornejo-Castillo FM, d'Ovidio F, De Meester L, Ferrera I, Garet-Delmas MJ, Guidi L, Lara E, Pesant S, Royo-Llonch M, Salazar G, Sanchez P, Sebastian M, Souffreau C, Dimier C, Picheral M, Searson S, Kandels-Lewis S, Gorsky G, Not F, Ogata H, Speich S, Stemmann L, Weissenbach J, Wincker P, Acinas SG, Sunagawa S, Bork P, Sullivan MB, Karsenti E, Bowler C, de Vargas C, Raes J. |
Ocean plankton. Determinants of community structure in the global plankton interactome. |
|
Ocean plankton. Determinants of community structure in the global plankton interactome. |
Science, 348, 1262073-1262073 |
, 348, 1262073-1262073 |
Science, 348, 1262073-1262073 |
2015/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Nissimov JI, Worthy CA, Rooks P, Napier JA, Kimmance SA, Henn MR, Ogata H, Allen MJ. |
|
Nissimov JI, Worthy CA, Rooks P, Napier JA, Kimmance SA, Henn MR, Ogata H, Allen MJ. |
Draft genome sequence of four coccolithoviruses: Emiliania huxleyi virus EhV-88, EhV-201, EhV-207, and EhV-208. |
|
Draft genome sequence of four coccolithoviruses: Emiliania huxleyi virus EhV-88, EhV-201, EhV-207, and EhV-208. |
J Virol, 86, 2896-2897 |
, 86, 2896-2897 |
J Virol, 86, 2896-2897 |
2015/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Johannessen TV, Bratbak G, Larsen A, Ogata H, Egge ES, Edvardsen B, Eikrem W, Sandaa RA. |
|
Johannessen TV, Bratbak G, Larsen A, Ogata H, Egge ES, Edvardsen B, Eikrem W, Sandaa RA. |
Characterisation of three novel giant viruses reveals huge diversity among viruses infecting Prymnesiales (Haptophyta). |
|
Characterisation of three novel giant viruses reveals huge diversity among viruses infecting Prymnesiales (Haptophyta). |
Virology, 467, 180-188 |
, 467, 180-188 |
Virology, 467, 180-188 |
2015/02 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Clerissi C., Desdevises Y., Romac S., Audic S., de Vargas C., Acinas S.G., Casotti R., Poulain J., Wincker P., Hingamp P., Ogata H., Grimsley N. |
|
Clerissi C., Desdevises Y., Romac S., Audic S., de Vargas C., Acinas S.G., Casotti R., Poulain J., Wincker P., Hingamp P., Ogata H., Grimsley N. |
Deep sequencing of amplified Prasinovirus and host green algal genes from an Indian Ocean transect reveals interacting trophic dependencies and new genotypes |
|
Deep sequencing of amplified Prasinovirus and host green algal genes from an Indian Ocean transect reveals interacting trophic dependencies and new genotypes |
Environ. Microbiol. Rep., 7, 979-989 |
, 7, 979-989 |
Environ. Microbiol. Rep., 7, 979-989 |
2015 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Massana R., Gobet A., Audic S., Bass D., Bittner L., Boutte C., Chambouvet A., Christen R., Claverie J.-M., Decelle J., Dolan J.R., Dunthorn M., Edvardsen B., Forn I., Forster D., Guillou L., Jaillon O., Kooistra W.H., Logares R., Mahe F., Not F., Ogata H., Pawlowski J., Pernice M.C., Probert I., Romac S., Richards T., Santini S., Shalchian-Tabrizi K., Siano R., Simon N., Stoeck T., Vaulot D., Zingone A., de Vargas C. |
|
Massana R., Gobet A., Audic S., Bass D., Bittner L., Boutte C., Chambouvet A., Christen R., Claverie J.-M., Decelle J., Dolan J.R., Dunthorn M., Edvardsen B., Forn I., Forster D., Guillou L., Jaillon O., Kooistra W.H., Logares R., Mahe F., Not F., Ogata H., Pawlowski J., Pernice M.C., Probert I., Romac S., Richards T., Santini S., Shalchian-Tabrizi K., Siano R., Simon N., Stoeck T., Vaulot D., Zingone A., de Vargas C. |
Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing |
|
Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing |
Environ. Microbiol., 17, 4035-4049 |
, 17, 4035-4049 |
Environ. Microbiol., 17, 4035-4049 |
2015 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Kopf A, Bicak M, Kottmann R, Schnetzer J, Kostadinov I, Lehmann K, Fernandez-Guerra A, Jeanthon C, Rahav E, Ullrich M, Wichels A, Gerdts G, Polymenakou P, Kotoulas G, Siam R, Abdallah R.Z, Sonnenschein E.C, Cariou T, O'Gara F, Jackson S, Orlic S, Steinke M, Busch J, Duarte B, Cacador I, Canning-Clode J, Bobrova O, Marteinsson V, Reynisson E, Loureiro C.M, Luna G.M, Quero G.M, Loscher C.R, Kremp A, DeLorenzo M.E, Ovreas L, Tolman J, LaRoche J, Penna A, Frischer M, Davis T, Katherine B, Meyer C.P, Ramos S, Magalhaes C, Jude-Lemeilleur F, Aguirre-Macedo M.L, Wang S, Poulton N, Jones S, Collin R, Fuhrman J.A, Conan P, Alonso C, Stambler N, Goodwin K, Yakimov M.M, Baltar F, Bodrossy L, Van De Kamp J, Frampton D.M.F, Ostrowski M, Van Ruth P, Malthouse P, Claus S, Deneudt K, Mortelmans J, Pitois S, Wallom D, Salter I, Costa R, Schroeder D.C, Kandil M.M, Amaral V, Biancalana F, Santana R, Pedrotti M.L, Yoshida T, Ogata H, Ingleton T, Munnik K, Rodriguez-Ezpeleta N, Berteaux-Lecellier V, Wecker P, Cancio I, Vaulot D, Bienhold C, Ghazal H, Chaouni B, Essayeh S, Ettamimi S, Zaid E.H, Boukhatem N, Bouali A, Chahboune R, Barrijal S, Timinouni M, El Otmani F, Bennani M, Mea M, Todorova N, Karamfilov V, ten Hoopen P, Cochrane G, L'Haridon S, Bizsel K.C, Vezzi A, Lauro F.M, Martin P, Jensen R.M, Hinks J, Gebbels S, Rosselli R, De Pascale F, Schiavon R, dos Santos A, Villar E, Pesant S, Cataletto B, Malfatti F, Edirisinghe R, Silveira J.A.H, Barbier M, Turk V, Tinta T, Fuller W.J, Salihoglu I, Serakinci N, Ergoren M.C, Bresnan E, Iriberri J, Nyhus P.A.F, B. Edvardsen, Karlsen H.E, Golyshin P.N, Gasol J.M, Moncheva S, Dzhembekova N, Johnson Z, Sinigalliano C.D, Gidley M.L, Zingone A, Danovaro R, Tsiamis G, Clark M.S, Costa A.C, El Bour M, Martins A.M, Collins E.R, Ducluzeau A.-L, Martinez J, Costello M.J, Amaral-Zettler L.A, Gilbert J.A, Davies N, Field D, Glockner F.O. |
|
Kopf A, Bicak M, Kottmann R, Schnetzer J, Kostadinov I, Lehmann K, Fernandez-Guerra A, Jeanthon C, Rahav E, Ullrich M, Wichels A, Gerdts G, Polymenakou P, Kotoulas G, Siam R, Abdallah R.Z, Sonnenschein E.C, Cariou T, O'Gara F, Jackson S, Orlic S, Steinke M, Busch J, Duarte B, Cacador I, Canning-Clode J, Bobrova O, Marteinsson V, Reynisson E, Loureiro C.M, Luna G.M, Quero G.M, Loscher C.R, Kremp A, DeLorenzo M.E, Ovreas L, Tolman J, LaRoche J, Penna A, Frischer M, Davis T, Katherine B, Meyer C.P, Ramos S, Magalhaes C, Jude-Lemeilleur F, Aguirre-Macedo M.L, Wang S, Poulton N, Jones S, Collin R, Fuhrman J.A, Conan P, Alonso C, Stambler N, Goodwin K, Yakimov M.M, Baltar F, Bodrossy L, Van De Kamp J, Frampton D.M.F, Ostrowski M, Van Ruth P, Malthouse P, Claus S, Deneudt K, Mortelmans J, Pitois S, Wallom D, Salter I, Costa R, Schroeder D.C, Kandil M.M, Amaral V, Biancalana F, Santana R, Pedrotti M.L, Yoshida T, Ogata H, Ingleton T, Munnik K, Rodriguez-Ezpeleta N, Berteaux-Lecellier V, Wecker P, Cancio I, Vaulot D, Bienhold C, Ghazal H, Chaouni B, Essayeh S, Ettamimi S, Zaid E.H, Boukhatem N, Bouali A, Chahboune R, Barrijal S, Timinouni M, El Otmani F, Bennani M, Mea M, Todorova N, Karamfilov V, ten Hoopen P, Cochrane G, L'Haridon S, Bizsel K.C, Vezzi A, Lauro F.M, Martin P, Jensen R.M, Hinks J, Gebbels S, Rosselli R, De Pascale F, Schiavon R, dos Santos A, Villar E, Pesant S, Cataletto B, Malfatti F, Edirisinghe R, Silveira J.A.H, Barbier M, Turk V, Tinta T, Fuller W.J, Salihoglu I, Serakinci N, Ergoren M.C, Bresnan E, Iriberri J, Nyhus P.A.F, B. Edvardsen, Karlsen H.E, Golyshin P.N, Gasol J.M, Moncheva S, Dzhembekova N, Johnson Z, Sinigalliano C.D, Gidley M.L, Zingone A, Danovaro R, Tsiamis G, Clark M.S, Costa A.C, El Bour M, Martins A.M, Collins E.R, Ducluzeau A.-L, Martinez J, Costello M.J, Amaral-Zettler L.A, Gilbert J.A, Davies N, Field D, Glockner F.O. |
The ocean sampling day consortium. |
|
The ocean sampling day consortium. |
GigaScience, 4, 27-27 |
, 4, 27-27 |
GigaScience, 4, 27-27 |
2015 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Takemura M, Yokobori S, Ogata H. |
|
Takemura M, Yokobori S, Ogata H. |
Evolution of eukaryotic DNA polymerases via interaction between cells and large DNA viruses. |
|
Evolution of eukaryotic DNA polymerases via interaction between cells and large DNA viruses. |
J. Mol. Evol. |
|
J. Mol. Evol. |
2015 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Gallot-Lavallee L., Pagarete A., Legendre M., Santini S., Sandaa R.-A., Himmelbauer H., Ogata H., Bratbak G., Claverie J.-M. |
|
Gallot-Lavallee L., Pagarete A., Legendre M., Santini S., Sandaa R.-A., Himmelbauer H., Ogata H., Bratbak G., Claverie J.-M. |
The 474-kilobase-pair complete genome sequence of CeV-01B, a virus infecting Haptolina (Chrysochromulina) ericina (Prymnesiophyceae) |
|
The 474-kilobase-pair complete genome sequence of CeV-01B, a virus infecting Haptolina (Chrysochromulina) ericina (Prymnesiophyceae) |
Genome Announc., 3, e01413-e01415 |
, 3, e01413-e01415 |
Genome Announc., 3, e01413-e01415 |
2015 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ben Halima N., Khemakhem B., Fendri I., Ogata H., Baril P., Pichon C., Abdelkafi S. |
|
Ben Halima N., Khemakhem B., Fendri I., Ogata H., Baril P., Pichon C., Abdelkafi S. |
Identification of a new oat beta-amylase by functional proteomics |
|
Identification of a new oat beta-amylase by functional proteomics |
Biochim. Biophys. Acta, 1864, 52-61 |
, 1864, 52-61 |
Biochim. Biophys. Acta, 1864, 52-61 |
2015 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Wilson WH, Gilg IC, Duarte A, Ogata H. |
|
Wilson WH, Gilg IC, Duarte A, Ogata H. |
Development of DNA mismatch repair gene, MutS, as a diagnostic marker for detection and phylogenetic analysis of algal Megaviruses. |
|
Development of DNA mismatch repair gene, MutS, as a diagnostic marker for detection and phylogenetic analysis of algal Megaviruses. |
Virology, 466-467, 123-128 |
, 466-467, 123-128 |
Virology, 466-467, 123-128 |
2014/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Clerissi C, Grimsley N, Subirana L, Maria E, Oriol L, Ogata H, Moreau H, Desdevises Y. |
|
Clerissi C, Grimsley N, Subirana L, Maria E, Oriol L, Ogata H, Moreau H, Desdevises Y. |
Prasinovirus distribution in the Northwest Mediterranean Sea is affected by the environment and particularly by phosphate availability. |
|
Prasinovirus distribution in the Northwest Mediterranean Sea is affected by the environment and particularly by phosphate availability. |
Virology, 466-467, 146-157 |
, 466-467, 146-157 |
Virology, 466-467, 146-157 |
2014/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Logares R, Sunagawa S, Salazar G, Cornejo-Castillo FM, Ferrera I, Sarmento H, Hingamp P, Ogata H, de Vargas C, Lima-Mendez G, Raes J, Poulain J, Jaillon O, Wincker P, Kandels-Lewis S, Karsenti E, Bork P, Acinas SG. |
|
Logares R, Sunagawa S, Salazar G, Cornejo-Castillo FM, Ferrera I, Sarmento H, Hingamp P, Ogata H, de Vargas C, Lima-Mendez G, Raes J, Poulain J, Jaillon O, Wincker P, Kandels-Lewis S, Karsenti E, Bork P, Acinas SG. |
Metagenomic 16S rDNA Illumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities. |
|
Metagenomic 16S rDNA Illumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities. |
Environ Microbiol, 16, 2659-2671 |
, 16, 2659-2671 |
Environ Microbiol, 16, 2659-2671 |
2014/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Clerissi C, Grimsley N, Ogata H, Hingamp P, Poulain J, Desdevises Y. |
|
Clerissi C, Grimsley N, Ogata H, Hingamp P, Poulain J, Desdevises Y. |
Unveiling of the diversity of Prasinoviruses (Phycodnaviridae) in marine samples by using high-throughput sequencing analyses of PCR-amplified DNA polymerase and major capsid protein genes. |
|
Unveiling of the diversity of Prasinoviruses (Phycodnaviridae) in marine samples by using high-throughput sequencing analyses of PCR-amplified DNA polymerase and major capsid protein genes. |
Appl Environ Microbiol, 80, 3150-3160 |
, 80, 3150-3160 |
Appl Environ Microbiol, 80, 3150-3160 |
2014/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Logares R, Audic S, Bass D, Bittner L, Boutte C, Christen R, Claverie JM, Decelle J, Dolan JR, Dunthorn M, Edvardsen B, Gobet A, Kooistra WH, Mahe F, Not F, Ogata H, Pawlowski J, Pernice MC, Romac S, Shalchian-Tabrizi K, Simon N, Stoeck T, Santini S, Siano R, Wincker P, Zingone A, Richards TA, de Vargas C, Massana R. |
|
Logares R, Audic S, Bass D, Bittner L, Boutte C, Christen R, Claverie JM, Decelle J, Dolan JR, Dunthorn M, Edvardsen B, Gobet A, Kooistra WH, Mahe F, Not F, Ogata H, Pawlowski J, Pernice MC, Romac S, Shalchian-Tabrizi K, Simon N, Stoeck T, Santini S, Siano R, Wincker P, Zingone A, Richards TA, de Vargas C, Massana R. |
Patterns of rare and abundant marine microbial eukaryotes. |
|
Patterns of rare and abundant marine microbial eukaryotes. |
Curr Biol, 24, 813-821 |
, 24, 813-821 |
Curr Biol, 24, 813-821 |
2014/04 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Hingamp P, Grimsley N, Acinas SG, Clerissi C, Subirana L, Poulain J, Ferrera I, Sarmento H, Villar E, Lima-Mendez G, Faust K, Sunagawa S, Claverie JM, Moreau H, Desdevises Y, Bork P, Raes J, de Vargas C, Karsenti E, Kandels-Lewis S, Jaillon O, Not F, Pesant S, Wincker P, Ogata H. |
|
Hingamp P, Grimsley N, Acinas SG, Clerissi C, Subirana L, Poulain J, Ferrera I, Sarmento H, Villar E, Lima-Mendez G, Faust K, Sunagawa S, Claverie JM, Moreau H, Desdevises Y, Bork P, Raes J, de Vargas C, Karsenti E, Kandels-Lewis S, Jaillon O, Not F, Pesant S, Wincker P, Ogata H. |
Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes. |
|
Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes. |
ISME J, 7, 1678-1695 |
, 7, 1678-1695 |
ISME J, 7, 1678-1695 |
2013/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Read BA, Kegel J, Klute MJ, Kuo A, Lefebvre SC, Maumus F, Mayer C, Miller J, Monier A, Salamov A, Young J, Aguilar M, Claverie JM, Frickenhaus S, Gonzalez K, Herman EK, Lin YC, Napier J, Ogata H, Sarno AF, Shmutz J, Schroeder D, de Vargas C, Verret F, von Dassow P, Valentin K, Van de Peer Y, Wheeler G, Dacks JB, Delwiche CF, Dyhrman ST, Glockner G, John U, Richards T, Worden AZ, Zhang X, Grigoriev IV. |
|
Read BA, Kegel J, Klute MJ, Kuo A, Lefebvre SC, Maumus F, Mayer C, Miller J, Monier A, Salamov A, Young J, Aguilar M, Claverie JM, Frickenhaus S, Gonzalez K, Herman EK, Lin YC, Napier J, Ogata H, Sarno AF, Shmutz J, Schroeder D, de Vargas C, Verret F, von Dassow P, Valentin K, Van de Peer Y, Wheeler G, Dacks JB, Delwiche CF, Dyhrman ST, Glockner G, John U, Richards T, Worden AZ, Zhang X, Grigoriev IV. |
Pan genome of the phytoplankton Emiliania underpins its global distribution. |
|
Pan genome of the phytoplankton Emiliania underpins its global distribution. |
Nature, 499, 209-213 |
, 499, 209-213 |
Nature, 499, 209-213 |
2013/07 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Bittner L, Gobet A, Audic S, Romac S, Egge ES, Santini S, Ogata H, Probert I, Edvardsen B, de Vargas C. |
|
Bittner L, Gobet A, Audic S, Romac S, Egge ES, Santini S, Ogata H, Probert I, Edvardsen B, de Vargas C. |
Diversity patterns of uncultured Haptophytes unravelled by pyrosequencing in Naples Bay. |
|
Diversity patterns of uncultured Haptophytes unravelled by pyrosequencing in Naples Bay. |
Mol Ecol, 22, 87-101 |
, 22, 87-101 |
Mol Ecol, 22, 87-101 |
2013/06 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Abdelkafi S, Abousalham A, Fendri I, Ogata H, Barouh N, Fouquet B, Scheirlinckx F, Villeneuve P, Carriere F. |
|
Abdelkafi S, Abousalham A, Fendri I, Ogata H, Barouh N, Fouquet B, Scheirlinckx F, Villeneuve P, Carriere F. |
Identification of a new phospholipase D in Carica papaya latex. |
|
Identification of a new phospholipase D in Carica papaya latex. |
Gene, 499, 243-249 |
, 499, 243-249 |
Gene, 499, 243-249 |
2012/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Nissimov JI, Worthy CA, Rooks P, Napier JA, Kimmance SA, Henn MR, Ogata H, Allen MJ. |
|
Nissimov JI, Worthy CA, Rooks P, Napier JA, Kimmance SA, Henn MR, Ogata H, Allen MJ. |
Draft genome sequence of the coccolithovirus Emiliania huxleyi virus 202. |
|
Draft genome sequence of the coccolithovirus Emiliania huxleyi virus 202. |
J Virol, 86, 2380-2381 |
, 86, 2380-2381 |
J Virol, 86, 2380-2381 |
2012/02 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Yoshida-Takashima Y, Yoshida M, Ogata H, Nagasaki K, Hiroishi S, Yoshida T. |
|
Yoshida-Takashima Y, Yoshida M, Ogata H, Nagasaki K, Hiroishi S, Yoshida T. |
Cyanophage infection in the bloom-forming cyanobacteria Microcystis aeruginosa in surface freshwater. |
|
Cyanophage infection in the bloom-forming cyanobacteria Microcystis aeruginosa in surface freshwater. |
Microbes Environ, 27, 350-355 |
, 27, 350-355 |
Microbes Environ, 27, 350-355 |
2012 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Hamacher K, Greiner T, Ogata H, Van Etten JL, Gebhardt M, Villarreal LP, Cosentino C, Moroni A, Thiel G. |
|
Hamacher K, Greiner T, Ogata H, Van Etten JL, Gebhardt M, Villarreal LP, Cosentino C, Moroni A, Thiel G. |
Phycodnavirus potassium ion channel proteins question the virus molecular piracy hypothesis. |
|
Phycodnavirus potassium ion channel proteins question the virus molecular piracy hypothesis. |
PLoS One, 7, e38826-e38826 |
, 7, e38826-e38826 |
PLoS One, 7, e38826-e38826 |
2012 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Pagarete A, Le Corguille G, Tiwari B, Ogata H, de Vargas C, Wilson WH, Allen MJ. |
|
Pagarete A, Le Corguille G, Tiwari B, Ogata H, de Vargas C, Wilson WH, Allen MJ. |
Unveiling the transcriptional features associated with coccolithovirus infection of natural Emiliania huxleyi blooms. |
|
Unveiling the transcriptional features associated with coccolithovirus infection of natural Emiliania huxleyi blooms. |
FEMS Microbiol Ecol, 78, 555-564 |
, 78, 555-564 |
FEMS Microbiol Ecol, 78, 555-564 |
2011/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Nissimov JI, Worthy CA, Rooks P, Napier JA, Kimmance SA, Henn MR, Ogata H, Allen MJ. |
|
Nissimov JI, Worthy CA, Rooks P, Napier JA, Kimmance SA, Henn MR, Ogata H, Allen MJ. |
Draft genome sequence of the Coccolithovirus Emiliania huxleyi virus 203. |
|
Draft genome sequence of the Coccolithovirus Emiliania huxleyi virus 203. |
J Virol, 85, 13468-13469 |
, 85, 13468-13469 |
J Virol, 85, 13468-13469 |
2011/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Nissimov JI, Worthy CA, Rooks P, Napier JA, Kimmance SA, Henn MR, Ogata H, Allen MJ. |
|
Nissimov JI, Worthy CA, Rooks P, Napier JA, Kimmance SA, Henn MR, Ogata H, Allen MJ. |
Draft genome sequence of the coccolithovirus EhV-84. |
|
Draft genome sequence of the coccolithovirus EhV-84. |
Stand Genomic Sci, 5, 1-11 |
, 5, 1-11 |
Stand Genomic Sci, 5, 1-11 |
2011/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Karsenti E, Acinas SG, Bork P, Bowler C, De Vargas C, Raes J, Sullivan M, Arendt D, Benzoni F, Claverie JM, Follows M, Gorsky G, Hingamp P, Iudicone D, Jaillon O, Kandels-Lewis S, Krzic U, Not F, Ogata H, Pesant S, Reynaud EG, Sardet C, Sieracki ME, Speich S, Velayoudon D, Weissenbach J, Wincker P. |
|
Karsenti E, Acinas SG, Bork P, Bowler C, De Vargas C, Raes J, Sullivan M, Arendt D, Benzoni F, Claverie JM, Follows M, Gorsky G, Hingamp P, Iudicone D, Jaillon O, Kandels-Lewis S, Krzic U, Not F, Ogata H, Pesant S, Reynaud EG, Sardet C, Sieracki ME, Speich S, Velayoudon D, Weissenbach J, Wincker P. |
A holistic approach to marine eco-systems biology. |
|
A holistic approach to marine eco-systems biology. |
PLoS Biol, 9, e1001177-e1001177 |
, 9, e1001177-e1001177 |
PLoS Biol, 9, e1001177-e1001177 |
2011/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Yoshida T, Claverie JM, Ogata H. |
|
Yoshida T, Claverie JM, Ogata H. |
Mimivirus reveals Mre11/Rad50 fusion proteins with a sporadic distribution in eukaryotes, bacteria, viruses and plasmids. |
|
Mimivirus reveals Mre11/Rad50 fusion proteins with a sporadic distribution in eukaryotes, bacteria, viruses and plasmids. |
Virol J, 8, 427-427 |
, 8, 427-427 |
Virol J, 8, 427-427 |
2011/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Ray J, Toyoda K, Sandaa RA, Nagasaki K, Bratbak G, Claverie JM. |
|
Ogata H, Ray J, Toyoda K, Sandaa RA, Nagasaki K, Bratbak G, Claverie JM. |
Two new subfamilies of DNA mismatch repair proteins (MutS) specifically abundant in the marine environment. |
|
Two new subfamilies of DNA mismatch repair proteins (MutS) specifically abundant in the marine environment. |
ISME J, 5, 1143-1151 |
, 5, 1143-1151 |
ISME J, 5, 1143-1151 |
2011/07 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Yamada T, Satoh S, Ishikawa H, Fujiwara A, Kawasaki T, Fujie M, Ogata H. |
|
Yamada T, Satoh S, Ishikawa H, Fujiwara A, Kawasaki T, Fujie M, Ogata H. |
A jumbo phage infecting the phytopathogen Ralstonia solanacearum defines a new lineage of the Myoviridae family. |
|
A jumbo phage infecting the phytopathogen Ralstonia solanacearum defines a new lineage of the Myoviridae family. |
Virology, 398, 135-147 |
, 398, 135-147 |
Virology, 398, 135-147 |
2010/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Monier A, Claverie J.-M. |
|
Ogata H, Monier A, Claverie J.-M. |
Distribution of Giant Viruses in Marine Environments. |
|
Distribution of Giant Viruses in Marine Environments. |
Global Change: Mankind-Marine Environment Interactions |
|
Global Change: Mankind-Marine Environment Interactions |
2010 |
|
英語 |
|
公開 |
| Abdelkafi S, Ogata H, Barouh N, Fouquet B, Lebrun R, Pina M, Scheirlinckx F, Villeneuve P, Carriere F. |
|
Abdelkafi S, Ogata H, Barouh N, Fouquet B, Lebrun R, Pina M, Scheirlinckx F, Villeneuve P, Carriere F. |
Identification and biochemical characterization of a GDSL-motif carboxylester hydrolase from Carica papaya latex. |
|
Identification and biochemical characterization of a GDSL-motif carboxylester hydrolase from Carica papaya latex. |
Biochim Biophys Acta, 1791, 1048-1056 |
, 1791, 1048-1056 |
Biochim Biophys Acta, 1791, 1048-1056 |
2009/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| von Dassow P, Ogata H, Probert I, Wincker P, Da Silva C, Audic S, Claverie JM, de Vargas C. |
|
von Dassow P, Ogata H, Probert I, Wincker P, Da Silva C, Audic S, Claverie JM, de Vargas C. |
Transcriptome analysis of functional differentiation between haploid and diploid cells of Emiliania huxleyi, a globally significant photosynthetic calcifying cell. |
|
Transcriptome analysis of functional differentiation between haploid and diploid cells of Emiliania huxleyi, a globally significant photosynthetic calcifying cell. |
Genome Biol, 10, R114-R114 |
, 10, R114-R114 |
Genome Biol, 10, R114-R114 |
2009/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Monier A, Pagarete A, de Vargas C, Allen MJ, Read B, Claverie JM, Ogata H. |
|
Monier A, Pagarete A, de Vargas C, Allen MJ, Read B, Claverie JM, Ogata H. |
Horizontal gene transfer of an entire metabolic pathway between a eukaryotic alga and its DNA virus. |
|
Horizontal gene transfer of an entire metabolic pathway between a eukaryotic alga and its DNA virus. |
Genome Res, 19, 1441-1449 |
, 19, 1441-1449 |
Genome Res, 19, 1441-1449 |
2009/08 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Claverie JM, Ogata H. |
|
Claverie JM, Ogata H. |
Ten good reasons not to exclude giruses from the evolutionary picture. |
|
Ten good reasons not to exclude giruses from the evolutionary picture. |
Nat Rev Microbiol, 7, 615-615 |
, 7, 615-615 |
Nat Rev Microbiol, 7, 615-615 |
2009/08 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Claverie JM, Grzela R, Lartigue A, Bernadac A, Nitsche S, Vacelet J, Ogata H, Abergel C. |
|
Claverie JM, Grzela R, Lartigue A, Bernadac A, Nitsche S, Vacelet J, Ogata H, Abergel C. |
Mimivirus and Mimiviridae: giant viruses with an increasing number of potential hosts, including corals and sponges. |
|
Mimivirus and Mimiviridae: giant viruses with an increasing number of potential hosts, including corals and sponges. |
J Invertebr Pathol, 101, 172-180 |
, 101, 172-180 |
J Invertebr Pathol, 101, 172-180 |
2009/07 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Claverie J.-M, Abergel C, Ogata H. |
|
Claverie J.-M, Abergel C, Ogata H. |
Mimivirus. |
|
Mimivirus. |
Lesser Known Large dsDNA Viruses |
|
Lesser Known Large dsDNA Viruses |
2009 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Toyoda K, Tomaru Y, Nakayama N, Shirai Y, Claverie JM, Nagasaki K. |
|
Ogata H, Toyoda K, Tomaru Y, Nakayama N, Shirai Y, Claverie JM, Nagasaki K. |
Remarkable sequence similarity between the dinoflagellate-infecting marine girus and the terrestrial pathogen African swine fever virus. |
|
Remarkable sequence similarity between the dinoflagellate-infecting marine girus and the terrestrial pathogen African swine fever virus. |
Virol J, 6, 178-178 |
, 6, 178-178 |
Virol J, 6, 178-178 |
2009 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Claverie JM. |
|
Ogata H, Claverie JM. |
How to infect a Mimivirus. |
|
How to infect a Mimivirus. |
Science, 321, 1305-1306 |
, 321, 1305-1306 |
Science, 321, 1305-1306 |
2008/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Yoshida T, Nagasaki K, Takashima Y, Shirai Y, Tomaru Y, Takao Y, Sakamoto S, Hiroishi S, Ogata H. |
|
Yoshida T, Nagasaki K, Takashima Y, Shirai Y, Tomaru Y, Takao Y, Sakamoto S, Hiroishi S, Ogata H. |
Ma-LMM01 infecting toxic Microcystis aeruginosa illuminates diverse cyanophage genome strategies. |
|
Ma-LMM01 infecting toxic Microcystis aeruginosa illuminates diverse cyanophage genome strategies. |
J Bacteriol, 190, 1762-1772 |
, 190, 1762-1772 |
J Bacteriol, 190, 1762-1772 |
2008/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Monier A, Larsen JB, Sandaa RA, Bratbak G, Claverie JM, Ogata H. |
|
Monier A, Larsen JB, Sandaa RA, Bratbak G, Claverie JM, Ogata H. |
Marine mimivirus relatives are probably large algal viruses. |
|
Marine mimivirus relatives are probably large algal viruses. |
Virol J, 5, 12-12 |
, 5, 12-12 |
Virol J, 5, 12-12 |
2008/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Monier A, Claverie JM, Ogata H. |
|
Monier A, Claverie JM, Ogata H. |
Taxonomic distribution of large DNA viruses in the sea. |
|
Taxonomic distribution of large DNA viruses in the sea. |
Genome Biol, 9, R106-R106 |
, 9, R106-R106 |
Genome Biol, 9, R106-R106 |
2008 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Monier A, Claverie JM, Ogata H. |
|
Monier A, Claverie JM, Ogata H. |
Horizontal gene transfer and nucleotide compositional anomaly in large DNA viruses. |
|
Horizontal gene transfer and nucleotide compositional anomaly in large DNA viruses. |
BMC Genomics, 8, 456-456 |
, 8, 456-456 |
BMC Genomics, 8, 456-456 |
2007/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Blanc G, Ogata H, Robert C, Audic S, Claverie JM, Raoult D. |
|
Blanc G, Ogata H, Robert C, Audic S, Claverie JM, Raoult D. |
Lateral gene transfer between obligate intracellular bacteria: evidence from the Rickettsia massiliae genome. |
|
Lateral gene transfer between obligate intracellular bacteria: evidence from the Rickettsia massiliae genome. |
Genome Res, 17, 1657-1664 |
, 17, 1657-1664 |
Genome Res, 17, 1657-1664 |
2007/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Claverie JM. |
|
Ogata H, Claverie JM. |
Unique genes in giant viruses: regular substitution pattern and anomalously short size. |
|
Unique genes in giant viruses: regular substitution pattern and anomalously short size. |
Genome Res, 17, 1353-1361 |
, 17, 1353-1361 |
Genome Res, 17, 1353-1361 |
2007/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Blanc G, Ogata H, Robert C, Audic S, Suhre K, Vestris G, Claverie JM, Raoult D. |
|
Blanc G, Ogata H, Robert C, Audic S, Suhre K, Vestris G, Claverie JM, Raoult D. |
Reductive genome evolution from the mother of Rickettsia. |
|
Reductive genome evolution from the mother of Rickettsia. |
PLoS Genet, 3, e14-e14 |
, 3, e14-e14 |
PLoS Genet, 3, e14-e14 |
2007/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Claverie J.-M. |
|
Ogata H, Claverie J.-M. |
An essential dichotomy of the gene pool of giant DNA viruses. |
|
An essential dichotomy of the gene pool of giant DNA viruses. |
JOBIM 2007, 269-270 |
, 269-270 |
JOBIM 2007, 269-270 |
2007 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Monier A, Claverie J.-M, Ogata H. |
|
Monier A, Claverie J.-M, Ogata H. |
Horizontal gene transfer and large DNA viruses. |
|
Horizontal gene transfer and large DNA viruses. |
JOBIM 2007, 271-273 |
, 271-273 |
JOBIM 2007, 271-273 |
2007 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Ogata H, Renesto P. |
|
Ogata H, Renesto P. |
Genomics of Rickettsial Agents. |
|
Genomics of Rickettsial Agents. |
Rickettsial Diseases: Old and New |
|
Rickettsial Diseases: Old and New |
2007 |
有 |
英語 |
|
公開 |
| Renesto P, Abergel C, Decloquement P, Moinier D, Azza S, Ogata H, Fourquet P, Gorvel JP, Claverie JM. |
|
Renesto P, Abergel C, Decloquement P, Moinier D, Azza S, Ogata H, Fourquet P, Gorvel JP, Claverie JM. |
Mimivirus giant particles incorporate a large fraction of anonymous and unique gene products. |
|
Mimivirus giant particles incorporate a large fraction of anonymous and unique gene products. |
J Virol, 80, 11678-11685 |
, 80, 11678-11685 |
J Virol, 80, 11678-11685 |
2006/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Abergel C, Blanc G, Monchois V, Renesto P, Sigoillot C, Ogata H, Raoult D, Claverie JM. |
|
Abergel C, Blanc G, Monchois V, Renesto P, Sigoillot C, Ogata H, Raoult D, Claverie JM. |
Impact of the excision of an ancient repeat insertion on Rickettsia conorii guanylate kinase activity. |
|
Impact of the excision of an ancient repeat insertion on Rickettsia conorii guanylate kinase activity. |
Mol Biol Evol, 23, 2112-2122 |
, 23, 2112-2122 |
Mol Biol Evol, 23, 2112-2122 |
2006/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Renesto P, Samson L, Ogata H, Azza S, Fourquet P, Gorvel JP, Heinzen RA, Raoult D. |
|
Renesto P, Samson L, Ogata H, Azza S, Fourquet P, Gorvel JP, Heinzen RA, Raoult D. |
Identification of two putative rickettsial adhesins by proteomic analysis. |
|
Identification of two putative rickettsial adhesins by proteomic analysis. |
Res Microbiol, 157, 605-612 |
, 157, 605-612 |
Res Microbiol, 157, 605-612 |
2006/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, La Scola B, Audic S, Renesto P, Blanc G, Robert C, Fournier PE, Claverie JM, Raoult D. |
|
Ogata H, La Scola B, Audic S, Renesto P, Blanc G, Robert C, Fournier PE, Claverie JM, Raoult D. |
Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens. |
|
Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens. |
PLoS Genet, 2, e76-e76 |
, 2, e76-e76 |
PLoS Genet, 2, e76-e76 |
2006/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Claverie JM, Ogata H, Audic S, Abergel C, Suhre K, Fournier PE. |
|
Claverie JM, Ogata H, Audic S, Abergel C, Suhre K, Fournier PE. |
Mimivirus and the emerging concept of "giant" virus. |
|
Mimivirus and the emerging concept of "giant" virus. |
Virus Res, 117, 133-144 |
, 117, 133-144 |
Virus Res, 117, 133-144 |
2006/04 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Fournier PE, Vallenet D, Barbe V, Audic S, Ogata H, Poirel L, Richet H, Robert C, Mangenot S, Abergel C, Nordmann P, Weissenbach J, Raoult D, Claverie JM. |
|
Fournier PE, Vallenet D, Barbe V, Audic S, Ogata H, Poirel L, Richet H, Robert C, Mangenot S, Abergel C, Nordmann P, Weissenbach J, Raoult D, Claverie JM. |
Comparative genomics of multidrug resistance in Acinetobacter baumannii. |
|
Comparative genomics of multidrug resistance in Acinetobacter baumannii. |
PLoS Genet, 2, e7-e7 |
, 2, e7-e7 |
PLoS Genet, 2, e7-e7 |
2006/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Raoult D. |
|
Ogata H, Raoult D. |
Genomics of Rickettsia. |
|
Genomics of Rickettsia. |
Encyclopedia of Genetics, Genomics, Proteomics and Bioinformatics |
|
Encyclopedia of Genetics, Genomics, Proteomics and Bioinformatics |
2006 |
有 |
英語 |
|
公開 |
| Ogata H, Robert C, Audic S, Robineau S, Blanc G, Fournier PE, Renesto P, Claverie JM, Raoult D. |
|
Ogata H, Robert C, Audic S, Robineau S, Blanc G, Fournier PE, Renesto P, Claverie JM, Raoult D. |
Rickettsia felis, from culture to genome sequencing. |
|
Rickettsia felis, from culture to genome sequencing. |
Ann N Y Acad Sci, 1063, 26-34 |
, 1063, 26-34 |
Ann N Y Acad Sci, 1063, 26-34 |
2005/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ngwamidiba M, Blanc G, Ogata H, Raoult D, Fournier PE. |
|
Ngwamidiba M, Blanc G, Ogata H, Raoult D, Fournier PE. |
Phylogenetic study of Rickettsia species using sequences of the autotransporter protein-encoding gene sca2. |
|
Phylogenetic study of Rickettsia species using sequences of the autotransporter protein-encoding gene sca2. |
Ann N Y Acad Sci, 1063, 94-99 |
, 1063, 94-99 |
Ann N Y Acad Sci, 1063, 94-99 |
2005/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Blanc G, Ngwamidiba M, Ogata H, Fournier PE, Claverie JM, Raoult D. |
|
Blanc G, Ngwamidiba M, Ogata H, Fournier PE, Claverie JM, Raoult D. |
Molecular evolution of rickettsia surface antigens: evidence of positive selection. |
|
Molecular evolution of rickettsia surface antigens: evidence of positive selection. |
Mol Biol Evol, 22, 2073-2083 |
, 22, 2073-2083 |
Mol Biol Evol, 22, 2073-2083 |
2005/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Zhu Y, Fournier PE, Ogata H, Raoult D. |
|
Zhu Y, Fournier PE, Ogata H, Raoult D. |
Multispacer typing of Rickettsia prowazekii enabling epidemiological studies of epidemic typhus. |
|
Multispacer typing of Rickettsia prowazekii enabling epidemiological studies of epidemic typhus. |
J Clin Microbiol, 43, 4708-4712 |
, 43, 4708-4712 |
J Clin Microbiol, 43, 4708-4712 |
2005/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Renesto P, Audic S, Robert C, Blanc G, Fournier PE, Parinello H, Claverie JM, Raoult D. |
|
Ogata H, Renesto P, Audic S, Robert C, Blanc G, Fournier PE, Parinello H, Claverie JM, Raoult D. |
The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite. |
|
The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite. |
PLoS Biol, 3, e248-e248 |
, 3, e248-e248 |
PLoS Biol, 3, e248-e248 |
2005/08 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Suhre K, Claverie JM. |
|
Ogata H, Suhre K, Claverie JM. |
Discovery of protein-coding palindromic repeats in Wolbachia. |
|
Discovery of protein-coding palindromic repeats in Wolbachia. |
Trends Microbiol, 13, 253-255 |
, 13, 253-255 |
Trends Microbiol, 13, 253-255 |
2005/06 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Rovery C, Renesto P, Crapoulet N, Matsumoto K, Parola P, Ogata H, Raoult D. |
|
Rovery C, Renesto P, Crapoulet N, Matsumoto K, Parola P, Ogata H, Raoult D. |
Transcriptional response of Rickettsia conorii exposed to temperature variation and stress starvation. |
|
Transcriptional response of Rickettsia conorii exposed to temperature variation and stress starvation. |
Res Microbiol, 156, 211-218 |
, 156, 211-218 |
Res Microbiol, 156, 211-218 |
2005/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Raoult D, Claverie JM. |
|
Ogata H, Raoult D, Claverie JM. |
A new example of viral intein in Mimivirus. |
|
A new example of viral intein in Mimivirus. |
Virol J, 2, 8-8 |
, 2, 8-8 |
Virol J, 2, 8-8 |
2005/02 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Claverie JM. |
|
Ogata H, Claverie JM. |
Metagrowth: a new resource for the building of metabolic hypotheses in microbiology. |
|
Metagrowth: a new resource for the building of metabolic hypotheses in microbiology. |
Nucleic Acids Res, 33, D321-D324 |
, 33, D321-D324 |
Nucleic Acids Res, 33, D321-D324 |
2005/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Renesto P, Ogata H, Audic S, Claverie JM, Raoult D. |
|
Renesto P, Ogata H, Audic S, Claverie JM, Raoult D. |
Some lessons from Rickettsia genomics. |
|
Some lessons from Rickettsia genomics. |
FEMS Microbiol Rev, 29, 99-117 |
, 29, 99-117 |
FEMS Microbiol Rev, 29, 99-117 |
2005/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Crapoulet N, Renesto P, Dumler J. S, Suhre K, Ogata H, Claverie J-M, Raoult D. |
|
Crapoulet N, Renesto P, Dumler J. S, Suhre K, Ogata H, Claverie J-M, Raoult D. |
Tropheryma whipplei genome at the beginning of the post-genomic era. |
|
Tropheryma whipplei genome at the beginning of the post-genomic era. |
Current Genomics, 6, 195-205 |
, 6, 195-205 |
Current Genomics, 6, 195-205 |
2005 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Abergel C, Raoult D, Claverie J.-M. |
|
Ogata H, Abergel C, Raoult D, Claverie J.-M. |
Response to comment on "the 1.2-megabase genome sequence of Mimivirus." |
|
Response to comment on "the 1.2-megabase genome sequence of Mimivirus." |
Science, 38, 1114b-1114b |
, 38, 1114b-1114b |
Science, 38, 1114b-1114b |
2005 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Fournier PE, Zhu Y, Ogata H, Raoult D. |
|
Fournier PE, Zhu Y, Ogata H, Raoult D. |
Use of highly variable intergenic spacer sequences for multispacer typing of Rickettsia conorii strains. |
|
Use of highly variable intergenic spacer sequences for multispacer typing of Rickettsia conorii strains. |
J Clin Microbiol, 42, 5757-5766 |
, 42, 5757-5766 |
J Clin Microbiol, 42, 5757-5766 |
2004/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Raoult D, Audic S, Robert C, Abergel C, Renesto P, Ogata H, La Scola B, Suzan M, Claverie JM. |
|
Raoult D, Audic S, Robert C, Abergel C, Renesto P, Ogata H, La Scola B, Suzan M, Claverie JM. |
The 1.2-megabase genome sequence of Mimivirus. |
|
The 1.2-megabase genome sequence of Mimivirus. |
Science, 306, 1344-1350 |
, 306, 1344-1350 |
Science, 306, 1344-1350 |
2004/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Drancourt M, Roux V, Dang LV, Tran-Hung L, Castex D, Chenal-Francisque V, Ogata H, Fournier PE, Crubezy E, Raoult D. |
|
Drancourt M, Roux V, Dang LV, Tran-Hung L, Castex D, Chenal-Francisque V, Ogata H, Fournier PE, Crubezy E, Raoult D. |
Genotyping, Orientalis-like Yersinia pestis, and plague pandemics. |
|
Genotyping, Orientalis-like Yersinia pestis, and plague pandemics. |
Emerg Infect Dis, 10, 1585-1592 |
, 10, 1585-1592 |
Emerg Infect Dis, 10, 1585-1592 |
2004/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Scorpio DG, Caspersen K, Ogata H, Park J, Dumler JS. |
|
Scorpio DG, Caspersen K, Ogata H, Park J, Dumler JS. |
Restricted changes in major surface protein-2 (msp2) transcription after prolonged in vitro passage of Anaplasma phagocytophilum. |
|
Restricted changes in major surface protein-2 (msp2) transcription after prolonged in vitro passage of Anaplasma phagocytophilum. |
BMC Microbiol, 4, 1-1 |
, 4, 1-1 |
BMC Microbiol, 4, 1-1 |
2004/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Renesto P, Crapoulet N, Ogata H, La Scola B, Vestris G, Claverie JM, Raoult D. |
|
Renesto P, Crapoulet N, Ogata H, La Scola B, Vestris G, Claverie JM, Raoult D. |
Genome-based design of a cell-free culture medium for Tropheryma whipplei. |
|
Genome-based design of a cell-free culture medium for Tropheryma whipplei. |
Lancet, 362, 447-449 |
, 362, 447-449 |
Lancet, 362, 447-449 |
2003/08 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Raoult D, Ogata H, Audic S, Robert C, Suhre K, Drancourt M, Claverie JM. |
|
Raoult D, Ogata H, Audic S, Robert C, Suhre K, Drancourt M, Claverie JM. |
Tropheryma whipplei Twist: a human pathogenic Actinobacteria with a reduced genome. |
|
Tropheryma whipplei Twist: a human pathogenic Actinobacteria with a reduced genome. |
Genome Res, 13, 1800-1809 |
, 13, 1800-1809 |
Genome Res, 13, 1800-1809 |
2003/08 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Claverie JM, Ogata H. |
|
Claverie JM, Ogata H. |
The insertion of palindromic repeats in the evolution of proteins. |
|
The insertion of palindromic repeats in the evolution of proteins. |
Trends Biochem Sci, 28, 75-80 |
, 28, 75-80 |
Trends Biochem Sci, 28, 75-80 |
2003/02 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Audic S, Abergel C, Fournier PE, Claverie JM. |
|
Ogata H, Audic S, Abergel C, Fournier PE, Claverie JM. |
Protein coding palindromes are a unique but recurrent feature in Rickettsia. |
|
Protein coding palindromes are a unique but recurrent feature in Rickettsia. |
Genome Res, 12, 808-816 |
, 12, 808-816 |
Genome Res, 12, 808-816 |
2002/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Zeaiter Z, Fournier PE, Ogata H, Raoult D. |
|
Zeaiter Z, Fournier PE, Ogata H, Raoult D. |
Phylogenetic classification of Bartonella species by comparing groEL sequences. |
|
Phylogenetic classification of Bartonella species by comparing groEL sequences. |
Int J Syst Evol Microbiol, 52, 165-171 |
, 52, 165-171 |
Int J Syst Evol Microbiol, 52, 165-171 |
2002/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Claverie JM, Abergel C, Audic S, Ogata H. |
|
Claverie JM, Abergel C, Audic S, Ogata H. |
Recent advances in computational genomics. |
|
Recent advances in computational genomics. |
Pharmacogenomics, 2, 361-372 |
, 2, 361-372 |
Pharmacogenomics, 2, 361-372 |
2001/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Audic S, Renesto-Audiffren P, Fournier PE, Barbe V, Samson D, Roux V, Cossart P, Weissenbach J, Claverie JM, Raoult D. |
|
Ogata H, Audic S, Renesto-Audiffren P, Fournier PE, Barbe V, Samson D, Roux V, Cossart P, Weissenbach J, Claverie JM, Raoult D. |
Mechanisms of evolution in Rickettsia conorii and R. prowazekii. |
|
Mechanisms of evolution in Rickettsia conorii and R. prowazekii. |
Science, 293, 2093-2098 |
, 293, 2093-2098 |
Science, 293, 2093-2098 |
2001/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Audic S, Claverie J.-M. |
|
Ogata H, Audic S, Claverie J.-M. |
Selfish DNA and the origin of genes. |
|
Selfish DNA and the origin of genes. |
Science, 291, 252-253 |
, 291, 252-253 |
Science, 291, 252-253 |
2001 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Fujibuchi W, Goto S, Kanehisa M. |
|
Ogata H, Fujibuchi W, Goto S, Kanehisa M. |
A heuristic graph comparison algorithm and its application to detect functionally related enzyme clusters. |
|
A heuristic graph comparison algorithm and its application to detect functionally related enzyme clusters. |
Nucleic Acids Res, 28, 4021-4028 |
, 28, 4021-4028 |
Nucleic Acids Res, 28, 4021-4028 |
2000/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Fujibuchi W, Ogata H, Matsuda H, Kanehisa M. |
|
Fujibuchi W, Ogata H, Matsuda H, Kanehisa M. |
Automatic detection of conserved gene clusters in multiple genomes by graph comparison and P-quasi grouping. |
|
Automatic detection of conserved gene clusters in multiple genomes by graph comparison and P-quasi grouping. |
Nucleic Acids Res, 28, 4029-4036 |
, 28, 4029-4036 |
Nucleic Acids Res, 28, 4029-4036 |
2000/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Audic S, Barbe V, Artiguenave F, Fournier PE, Raoult D, Claverie JM. |
|
Ogata H, Audic S, Barbe V, Artiguenave F, Fournier PE, Raoult D, Claverie JM. |
Selfish DNA in protein-coding genes of Rickettsia. |
|
Selfish DNA in protein-coding genes of Rickettsia. |
Science, 290, 347-350 |
, 290, 347-350 |
Science, 290, 347-350 |
2000/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Goto S, Sato K, Fujibuchi W, Bono H, Kanehisa M. |
|
Ogata H, Goto S, Sato K, Fujibuchi W, Bono H, Kanehisa M. |
KEGG: Kyoto Encyclopedia of Genes and Genomes. |
|
KEGG: Kyoto Encyclopedia of Genes and Genomes. |
Nucleic Acids Res, 27, 29-34 |
, 27, 29-34 |
Nucleic Acids Res, 27, 29-34 |
1999/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Kawashima S, Ogata H, Kanehisa M. |
|
Kawashima S, Ogata H, Kanehisa M. |
AAindex: Amino Acid Index Database. |
|
AAindex: Amino Acid Index Database. |
Nucleic Acids Res, 27, 368-369 |
, 27, 368-369 |
Nucleic Acids Res, 27, 368-369 |
1999/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Goto S, Fujibuchi W, Kanehisa M. |
|
Ogata H, Goto S, Fujibuchi W, Kanehisa M. |
Computation with the KEGG pathway database. |
|
Computation with the KEGG pathway database. |
Biosystems, 47, 119-128 |
, 47, 119-128 |
Biosystems, 47, 119-128 |
1998/06 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Bono H, Ogata H, Goto S, Kanehisa M. |
|
Bono H, Ogata H, Goto S, Kanehisa M. |
Reconstruction of amino acid biosynthesis pathways from the complete genome sequence. |
|
Reconstruction of amino acid biosynthesis pathways from the complete genome sequence. |
Genome Res, 8, 203-210 |
, 8, 203-210 |
Genome Res, 8, 203-210 |
1998/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Bono H, Goto S, Fujibuchi W, Ogata H, Kanehisa M. |
|
Bono H, Goto S, Fujibuchi W, Ogata H, Kanehisa M. |
Systematic Prediction of Orthologous Units of Genes in the Complete Genomes. |
|
Systematic Prediction of Orthologous Units of Genes in the Complete Genomes. |
Genome Inform Ser Workshop Genome Inform, 9, 32-40 |
, 9, 32-40 |
Genome Inform Ser Workshop Genome Inform, 9, 32-40 |
1998 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Fujibuchi W, Kazushige S, Ogata H, Goto S, Kanehisa M. |
|
Fujibuchi W, Kazushige S, Ogata H, Goto S, Kanehisa M. |
KEGG and DBGET/LinkDB: Integration of biological relationships in divergent molecular biology data. |
|
KEGG and DBGET/LinkDB: Integration of biological relationships in divergent molecular biology data. |
Knowledge Sharing Across Biological and Medical Knowledge Based Systems, Technical Report WS-98-04, 35-40 |
, Technical Report WS-98-04, 35-40 |
Knowledge Sharing Across Biological and Medical Knowledge Based Systems, Technical Report WS-98-04, 35-40 |
1998 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Kanehisa M. |
|
Ogata H, Kanehisa M. |
A Survey on E. coli Enzymes: Correlation between Metabolic Pathway and Gene Location. |
|
A Survey on E. coli Enzymes: Correlation between Metabolic Pathway and Gene Location. |
ICR Annual Report 1996, 52-53 |
, 52-53 |
ICR Annual Report 1996, 52-53 |
1997 |
有 |
英語 |
研究論文(大学、研究機関紀要) |
公開 |
| Goto S, Bono H, Ogata H, Fujibuchi W, Nishioka T, Sato K, Kanehisa M. |
|
Goto S, Bono H, Ogata H, Fujibuchi W, Nishioka T, Sato K, Kanehisa M. |
Organizing and computing metabolic pathway data in terms of binary relations. |
|
Organizing and computing metabolic pathway data in terms of binary relations. |
Pac Symp Biocomput, 175-186 |
, 175-186 |
Pac Symp Biocomput, 175-186 |
1997 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Ogata H, Fujibuchi W, Kanehisa M. |
|
Ogata H, Fujibuchi W, Kanehisa M. |
The size differences among mammalian introns are due to the accumulation of small deletions. |
|
The size differences among mammalian introns are due to the accumulation of small deletions. |
FEBS Lett, 390, 99-103 |
, 390, 99-103 |
FEBS Lett, 390, 99-103 |
1996/07 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Bono H, Fujibuchi W, Goto S, Kanehisa M. |
|
Ogata H, Bono H, Fujibuchi W, Goto S, Kanehisa M. |
Analysis of binary relations and hierarchies of enzymes in the metabolic pathways. |
|
Analysis of binary relations and hierarchies of enzymes in the metabolic pathways. |
Genome Informatics, 7, 128-136 |
, 7, 128-136 |
Genome Informatics, 7, 128-136 |
1996 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Ogata H, Akiyama Y, Kanehisa M. |
|
Ogata H, Akiyama Y, Kanehisa M. |
A genetic algorithm based molecular modeling technique for RNA stem-loop structures. |
|
A genetic algorithm based molecular modeling technique for RNA stem-loop structures. |
Nucleic Acids Res, 23, 419-426 |
, 23, 419-426 |
Nucleic Acids Res, 23, 419-426 |
1995/02 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ogata H, Akiyama Y, Kanehisa M. |
|
Ogata H, Akiyama Y, Kanehisa M. |
A computer modeling method for three-dimensional structure of RNA. |
|
A computer modeling method for three-dimensional structure of RNA. |
Genome Informatics, 4, 270-274 |
, 4, 270-274 |
Genome Informatics, 4, 270-274 |
1993 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
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