| 馬見塚 拓 |
馬見塚 拓 |
|
機械学習による薬物分子-ターゲット相互作用予測  |
機械学習による薬物分子-ターゲット相互作用予測 |
|
SAR News, 29, 2-8 |
SAR News, 29, 2-8 |
, 29, 2-8 |
2015/10 |
|
日本語 |
研究論文(学術雑誌) |
公開 |
| 茅野 光範, 馬見塚 拓 |
茅野 光範, 馬見塚 拓 |
|
Close up実験法 Series225 ROS-DETによる遺伝子「スイッチ発現」検出 |
Close up実験法 Series225 ROS-DETによる遺伝子「スイッチ発現」検出 |
|
実験医学, 30, 6, 969-974 |
実験医学, 30, 6, 969-974 |
, 30, 6, 969-974 |
2012/04 |
|
日本語 |
研究論文(学術雑誌) |
公開 |
| 瀧川 一学, 馬見塚 拓 |
瀧川 一学, 馬見塚 拓 |
|
化学とグラフアルゴリズム |
化学とグラフアルゴリズム |
|
化学と教育, 59, 9, 450-453 |
化学と教育, 59, 9, 450-453 |
, 59, 9, 450-453 |
2011/09 |
有 |
日本語 |
研究論文(学術雑誌) |
公開 |
| 馬見塚 拓, 米屋 隆 |
馬見塚 拓, 米屋 隆 |
|
PURE:PubMed文献検索支援システム |
PURE:PubMed文献検索支援システム |
|
実験医学, 26, 7, 1167-1172 |
実験医学, 26, 7, 1167-1172 |
, 26, 7, 1167-1172 |
2008/05 |
|
日本語 |
研究論文(学術雑誌) |
公開 |
| 志賀 元紀, 瀧川 一学, 馬見塚 拓 |
志賀 元紀, 瀧川 一学, 馬見塚 拓 |
|
多様なゲノムデータの統合的クラスタリング解析(理論/実験技術) |
多様なゲノムデータの統合的クラスタリング解析(理論/実験技術) |
|
生物物理, 48, 3, 190-194 |
生物物理, 48, 3, 190-194 |
, 48, 3, 190-194 |
2008/05 |
有 |
日本語 |
研究論文(学術雑誌) |
公開 |
| 馬見塚 拓, 安倍 直樹 |
馬見塚 拓, 安倍 直樹 |
|
集団質問学習 - データマイニング・バイオインフォマティクスへの展開 - (招待論文) |
集団質問学習 - データマイニング・バイオインフォマティクスへの展開 - (招待論文) |
|
電子情報通信学会和文論文誌, J85D-II, 5, 717-724 |
電子情報通信学会和文論文誌, J85D-II, 5, 717-724 |
, J85D-II, 5, 717-724 |
2002/05 |
有 |
日本語 |
研究論文(学術雑誌) |
公開 |
| Gillberg Jussi, Marttinen Pekka, Mamitsuka Hiroshi, Kaski Samuel |
|
Gillberg Jussi, Marttinen Pekka, Mamitsuka Hiroshi, Kaski Samuel |
Modelling G×E with historical weather information improves genomic prediction in new environments |
|
Modelling G×E with historical weather information improves genomic prediction in new environments |
Bioinformatics, 35, 20, 4045-4052 |
, 35, 20, 4045-4052 |
Bioinformatics, 35, 20, 4045-4052 |
2019/10 |
有 |
|
|
公開 |
| Sun Lu, Nguyen Canh Hao, Mamitsuka Hiroshi |
|
Sun Lu, Nguyen Canh Hao, Mamitsuka Hiroshi |
Fast and Robust Multi-View Multi-Task Learning via Group Sparsity |
|
Fast and Robust Multi-View Multi-Task Learning via Group Sparsity |
Proceedings of the Twenty-Eighth International Joint Conference on Artificial Intelligence, 3499-3505 |
, 3499-3505 |
Proceedings of the Twenty-Eighth International Joint Conference on Artificial Intelligence, 3499-3505 |
2019/08 |
有 |
|
|
公開 |
| Sun Lu, Nguyen Canh Hao, Mamitsuka Hiroshi |
|
Sun Lu, Nguyen Canh Hao, Mamitsuka Hiroshi |
Multiplicative Sparse Feature Decomposition for Efficient Multi-View Multi-Task Learning |
|
Multiplicative Sparse Feature Decomposition for Efficient Multi-View Multi-Task Learning |
Proceedings of the Twenty-Eighth International Joint Conference on Artificial Intelligence, 3506-3512 |
, 3506-3512 |
Proceedings of the Twenty-Eighth International Joint Conference on Artificial Intelligence, 3506-3512 |
2019/08 |
有 |
|
|
公開 |
| Nguyen Dai Hai, Nguyen Canh Hao, Mamitsuka Hiroshi |
|
Nguyen Dai Hai, Nguyen Canh Hao, Mamitsuka Hiroshi |
ADAPTIVE: leArning DAta-dePendenT, concIse molecular VEctors for fast, accurate metabolite identification from tandem mass spectra |
|
ADAPTIVE: leArning DAta-dePendenT, concIse molecular VEctors for fast, accurate metabolite identification from tandem mass spectra |
Bioinformatics (Proceedings of the 27th International Conference on Intelligent Systems for Molecular Biology (ISMB/ECCB 2019)), 35, 14, i164-i172 |
, 35, 14, i164-i172 |
Bioinformatics (Proceedings of the 27th International Conference on Intelligent Systems for Molecular Biology (ISMB/ECCB 2019)), 35, 14, i164-i172 |
2019/07 |
有 |
|
|
公開 |
| You Ronghui, Yao Shuwei, Xiong Yi, Huang Xiaodi, Sun Fengzhu, Mamitsuka Hiroshi, Zhu Shanfeng |
|
You Ronghui, Yao Shuwei, Xiong Yi, Huang Xiaodi, Sun Fengzhu, Mamitsuka Hiroshi, Zhu Shanfeng |
NetGO: improving large-scale protein function prediction with massive network information |
|
NetGO: improving large-scale protein function prediction with massive network information |
Nucleic Acids Research, 47, W1, W379-W387 |
, 47, W1, W379-W387 |
Nucleic Acids Research, 47, W1, W379-W387 |
2019/07 |
有 |
|
|
公開 |
| Wicker Nicolas, Nguyen Canh Hao, Mamitsuka Hiroshi |
|
Wicker Nicolas, Nguyen Canh Hao, Mamitsuka Hiroshi |
A p-Laplacian Random Walk: Application to Video Games |
|
A p-Laplacian Random Walk: Application to Video Games |
Austrian Journal of Statistics, 48, 5, 11-16 |
, 48, 5, 11-16 |
Austrian Journal of Statistics, 48, 5, 11-16 |
2019/07 |
有 |
|
|
公開 |
| Eid Abdelrahman Munther, Mamitsuka Hiroshi, Wicker Nicolas |
|
Eid Abdelrahman Munther, Mamitsuka Hiroshi, Wicker Nicolas |
A Metropolis-Hastings Sampling of Subtrees in Graphs |
|
A Metropolis-Hastings Sampling of Subtrees in Graphs |
Austrian Journal of Statistics, 48, 5, 17-33 |
, 48, 5, 17-33 |
Austrian Journal of Statistics, 48, 5, 17-33 |
2019/07 |
有 |
|
|
公開 |
| Hiroshi Mamitsuka |
|
Hiroshi Mamitsuka |
Machine Learning for Marketing |
|
Machine Learning for Marketing |
|
|
|
2019/06 |
|
|
|
公開 |
| Shuigeng Zhou, Yi-Ping Phoebe Chen, Hiroshi Mamitsuka |
|
Shuigeng Zhou, Yi-Ping Phoebe Chen, Hiroshi Mamitsuka |
Editorial |
|
Editorial |
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 16, 2, 350 |
, 16, 2, 350 |
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 16, 2, 350 |
2019/03 |
有 |
|
|
公開 |
| duVerle DA, Mamitsuka H |
|
duVerle DA, Mamitsuka H |
CalCleaveMKL: a Tool for Calpain Cleavage Prediction. |
|
CalCleaveMKL: a Tool for Calpain Cleavage Prediction. |
Methods in molecular biology (Clifton, N.J.), 1915, 121-147 |
, 1915, 121-147 |
Methods in molecular biology (Clifton, N.J.), 1915, 121-147 |
2019 |
有 |
|
|
公開 |
| Hiroshi Mamitsuka |
|
Hiroshi Mamitsuka |
Textbook of Machine Learning and Data Mining (with Bioinformatics Applications) |
|
Textbook of Machine Learning and Data Mining (with Bioinformatics Applications) |
Global Data Science Publishing |
|
Global Data Science Publishing |
2018/09 |
有 |
英語 |
|
公開 |
| Kishan Wimalawarne, Makoto Yamada, Hiroshi Mamitsuka |
|
Kishan Wimalawarne, Makoto Yamada, Hiroshi Mamitsuka |
Convex Coupled Matrix and Tensor Completion |
|
Convex Coupled Matrix and Tensor Completion |
Neural Computation |
|
Neural Computation |
2018/08 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Dai Hai Nguyen, Canh Hao Nguyen, Hiroshi Mamitsuka |
|
Dai Hai Nguyen, Canh Hao Nguyen, Hiroshi Mamitsuka |
Recent Advances and Prospects of Computational Methods for Metabolite Identification: A Review with Emphasis on Machine Learning Approaches |
|
Recent Advances and Prospects of Computational Methods for Metabolite Identification: A Review with Emphasis on Machine Learning Approaches |
Briefings in Bioinformatics |
|
Briefings in Bioinformatics |
2018/08 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Dai Hai Nguyen, Canh Hao Nguyen, Mamitsuka Hiroshi |
|
Dai Hai Nguyen, Canh Hao Nguyen, Mamitsuka Hiroshi |
SIMPLE: Sparse Interaction Model over Peaks of moLEcules for fast, interpretable metabolite identification from tandem mass spectra |
|
SIMPLE: Sparse Interaction Model over Peaks of moLEcules for fast, interpretable metabolite identification from tandem mass spectra |
Bioinformatics (Proceedings of the 26th International Conference on Intelligent Systems for Molecular Biology (ISMB 2018)), 34, 13, i323-i332 |
, 34, 13, i323-i332 |
Bioinformatics (Proceedings of the 26th International Conference on Intelligent Systems for Molecular Biology (ISMB 2018)), 34, 13, i323-i332 |
2018/06 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| You Ronghui, Zhang Zihan, Xiong Yi, Sun Fengzhu, Mamitsuka Hiroshi, Zhu Shanfeng |
|
You Ronghui, Zhang Zihan, Xiong Yi, Sun Fengzhu, Mamitsuka Hiroshi, Zhu Shanfeng |
GOLabeler: Improving Sequence-based Large-scale Protein Function Prediction by Learning to Rank |
|
GOLabeler: Improving Sequence-based Large-scale Protein Function Prediction by Learning to Rank |
Bioinformatics, 34, 14, 2465-2473 |
, 34, 14, 2465-2473 |
Bioinformatics, 34, 14, 2465-2473 |
2018/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Hiroshi Mamitsuka |
|
Hiroshi Mamitsuka |
Data Mining for Systems Biology |
|
Data Mining for Systems Biology |
Methods in Molecular Biology, 1807 |
, 1807 |
Methods in Molecular Biology, 1807 |
2018 |
有 |
英語 |
研究論文(その他学術会議資料等) |
公開 |
| Shengwen Peng, Hiroshi Mamitsuka, Shanfeng Zhu |
|
Shengwen Peng, Hiroshi Mamitsuka, Shanfeng Zhu |
MeSHLabeler and DeepMeSH: Recent Progress in Large-Scale MeSH Indexing |
|
MeSHLabeler and DeepMeSH: Recent Progress in Large-Scale MeSH Indexing |
Methods in Molecular Biology, 1807, 203-209 |
, 1807, 203-209 |
Methods in Molecular Biology, 1807, 203-209 |
2018 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Jieyao Deng, Qingjun Yuan, Hiroshi Mamitsuka, Shanfeng Zhu |
|
Jieyao Deng, Qingjun Yuan, Hiroshi Mamitsuka, Shanfeng Zhu |
DrugE-Rank: Predicting Drug-Target Interactions by Learning to Rank |
|
DrugE-Rank: Predicting Drug-Target Interactions by Learning to Rank |
Methods in Molecular Biology, 1807, 195-202 |
, 1807, 195-202 |
Methods in Molecular Biology, 1807, 195-202 |
2018 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Kei-ichiro Takahashi, David A. duVerle, Sohiya Yotsukura, Ichigaku Takigawa, Hiroshi Mamitsuka |
|
Kei-ichiro Takahashi, David A. duVerle, Sohiya Yotsukura, Ichigaku Takigawa, Hiroshi Mamitsuka |
SiBIC: A Tool for Generating a Network of Biclusters Captured by Maximal Frequent Itemset Mining |
|
SiBIC: A Tool for Generating a Network of Biclusters Captured by Maximal Frequent Itemset Mining |
Methods in Molecular Biology, 1807, 95-111 |
, 1807, 95-111 |
Methods in Molecular Biology, 1807, 95-111 |
2018 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Masayuki Karasuyama,Hiroshi Mamitsuka |
|
Masayuki Karasuyama,Hiroshi Mamitsuka |
Factor Analysis on a Graph. |
|
Factor Analysis on a Graph. |
International Conference on Artificial Intelligence and Statistics, AISTATS 2018, 9-11 April 2018, Playa Blanca, Lanzarote, Canary Islands, Spain, 1117-1126 |
, 1117-1126 |
International Conference on Artificial Intelligence and Statistics, AISTATS 2018, 9-11 April 2018, Playa Blanca, Lanzarote, Canary Islands, Spain, 1117-1126 |
2018 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Wimalawarne Kishan, Mamitsuka Hiroshi |
|
Wimalawarne Kishan, Mamitsuka Hiroshi |
Efficient Convex Completion of Coupled Tensors using Coupled Nuclear Norms |
|
Efficient Convex Completion of Coupled Tensors using Coupled Nuclear Norms |
Advances in Neural Information Processing Systems 31: Annual Conference on Neural Information Processing Systems 2018, NeurIPS 2018, 3-8 December 2018, Montréal, Canada., 31, 6902-6910 |
, 31, 6902-6910 |
Advances in Neural Information Processing Systems 31: Annual Conference on Neural Information Processing Systems 2018, NeurIPS 2018, 3-8 December 2018, Montréal, Canada., 31, 6902-6910 |
2018 |
有 |
|
|
公開 |
| Gao Junning, Yao Shuwei, Mamitsuka Hiroshi, Zhu Shanfeng |
|
Gao Junning, Yao Shuwei, Mamitsuka Hiroshi, Zhu Shanfeng |
AiProAnnotator: Low-rank Approximation with network side information for high-performance, large-scale human Protein abnormality Annotator |
|
AiProAnnotator: Low-rank Approximation with network side information for high-performance, large-scale human Protein abnormality Annotator |
PROCEEDINGS 2018 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM), 13-20 |
, 13-20 |
PROCEEDINGS 2018 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM), 13-20 |
2018 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Mamitsuka H. |
|
Mamitsuka H. |
Preface |
|
Preface |
Methods in Molecular Biology, 1807, v-vi |
, 1807, v-vi |
Methods in Molecular Biology, 1807, v-vi |
2018 |
有 |
|
|
公開 |
| Yamada M, Tang J, Lugo-Martinez J, Hodzic E, Shrestha R, Saha A, Ouyang H, Yin D, Mamitsuka H, Sahinalp C, Radivojac P, Menczer F, Chang Y. |
|
Yamada M, Tang J, Lugo-Martinez J, Hodzic E, Shrestha R, Saha A, Ouyang H, Yin D, Mamitsuka H, Sahinalp C, Radivojac P, Menczer F, Chang Y. |
Ultra High-Dimensional Nonlinear Feature Selection for Big Biological Data |
|
Ultra High-Dimensional Nonlinear Feature Selection for Big Biological Data |
IEEE Transactions on Knowledge and Data Engineering, 30, 7, 1352-1365 |
, 30, 7, 1352-1365 |
IEEE Transactions on Knowledge and Data Engineering, 30, 7, 1352-1365 |
2018 |
有 |
|
|
公開 |
| Mehmet Gönen, Barbara A. Weir, Glenn S. Cowley, Francisca Vazquez, Yuanfang Guan, Alok Jaiswal, Masayuki Karasuyama, Vladislav Uzunangelov, Tao Wang, Aviad Tsherniak, Sara Howell, Daniel Marbach, Bruce Hoff, Thea C. Norman, Antti Airola, Adrian Bivol, Kerstin Bunte, Daniel Carlin, Sahil Chopra, Alden Deran, Kyle Ellrott, Peddinti Gopalacharyulu, Kiley Graim, Samuel Kaski, Suleiman A. Khan, Yulia Newton, Sam Ng, Tapio Pahikkala, Evan Paull, Artem Sokolov, Hao Tang, Jing Tang, Krister Wennerberg, Yang Xie, Xiaowei Zhan, Fan Zhu, Tero Aittokallio, Hiroshi Mamitsuka, Joshua~M. Stuart, Jesse~S. Boehm, David~E. Root, Guanghua Xiao, Gustavo Stolovitzky, William~C. Hahn, Adam~A. Margolin, Bahman Afsari, Antti Airola, Tero Aittokallio, Adrian Bivol, Jesse S. Boehm, Kerstin Bunte, Daniel Carlin, Yu-Chuan Chang, Tenghui Chen, Zechen Chong, Sahil Chopra, Glenn S. Cowley, Alden Deran, Kyle Ellrott, Haitham Elmarakeby, Elana J. Fertig, Emanuel Gon{\c{c}}alves, Mehmet Gönen, Pinghua Gong, Peddinti Gopalacharyulu, Kiley Graim, Yuanfang Guan, Christoph Hafemeister, William C. Hahn, Lenwood Heath, Bruce Hoff, Sara Howell, Alok Jaiswal, Masayuki Karasuyama, Samuel Kaski, {\L}ukasz K{\k{e}}dziorski, Suleiman A. Khan, Niraj Khemka, Erh-kan King, Mario Lauria, Mark Liu, Daniel Machado, Hiroshi Mamitsuka, Daniel Marbach, Adam A. Margolin, Mateusz Mazurkiewicz, Michael P. Menden, Szymon Migacz, Yulia Newton, Sam Ng, Zhi Nie, Thea C. Norman, Tapio Pahikkala, Evan Paull, Paurush Praveen, Corrado Priami, Simone Rizzetto, Miguel Rocha, David E. Root, Cameron Rudd, Witold R. Rudnicki, Julio Saez-Rodriguez, Artem Sokolov, Lei Song, Gustavo Stolovitzky, Joshua M. Stuart, Duanchen Sun, Bence Szalai, Hao Tang, Jing Tang, Aviad Tsherniak, Vladislav Uzunangelov, Francisca Vazquez, Tao Wang, Difei Wang, Barbara A. Weir, Krister Wennerberg, Ling-yun Wu, Guanghua Xiao, Yang Xie, Jieping Ye, Yuting Ye, Xiaowei Zhan, Wanding Zhou, Fan Zhu |
|
Mehmet Gönen, Barbara A. Weir, Glenn S. Cowley, Francisca Vazquez, Yuanfang Guan, Alok Jaiswal, Masayuki Karasuyama, Vladislav Uzunangelov, Tao Wang, Aviad Tsherniak, Sara Howell, Daniel Marbach, Bruce Hoff, Thea C. Norman, Antti Airola, Adrian Bivol, Kerstin Bunte, Daniel Carlin, Sahil Chopra, Alden Deran, Kyle Ellrott, Peddinti Gopalacharyulu, Kiley Graim, Samuel Kaski, Suleiman A. Khan, Yulia Newton, Sam Ng, Tapio Pahikkala, Evan Paull, Artem Sokolov, Hao Tang, Jing Tang, Krister Wennerberg, Yang Xie, Xiaowei Zhan, Fan Zhu, Tero Aittokallio, Hiroshi Mamitsuka, Joshua~M. Stuart, Jesse~S. Boehm, David~E. Root, Guanghua Xiao, Gustavo Stolovitzky, William~C. Hahn, Adam~A. Margolin, Bahman Afsari, Antti Airola, Tero Aittokallio, Adrian Bivol, Jesse S. Boehm, Kerstin Bunte, Daniel Carlin, Yu-Chuan Chang, Tenghui Chen, Zechen Chong, Sahil Chopra, Glenn S. Cowley, Alden Deran, Kyle Ellrott, Haitham Elmarakeby, Elana J. Fertig, Emanuel Gon{\c{c}}alves, Mehmet Gönen, Pinghua Gong, Peddinti Gopalacharyulu, Kiley Graim, Yuanfang Guan, Christoph Hafemeister, William C. Hahn, Lenwood Heath, Bruce Hoff, Sara Howell, Alok Jaiswal, Masayuki Karasuyama, Samuel Kaski, {\L}ukasz K{\k{e}}dziorski, Suleiman A. Khan, Niraj Khemka, Erh-kan King, Mario Lauria, Mark Liu, Daniel Machado, Hiroshi Mamitsuka, Daniel Marbach, Adam A. Margolin, Mateusz Mazurkiewicz, Michael P. Menden, Szymon Migacz, Yulia Newton, Sam Ng, Zhi Nie, Thea C. Norman, Tapio Pahikkala, Evan Paull, Paurush Praveen, Corrado Priami, Simone Rizzetto, Miguel Rocha, David E. Root, Cameron Rudd, Witold R. Rudnicki, Julio Saez-Rodriguez, Artem Sokolov, Lei Song, Gustavo Stolovitzky, Joshua M. Stuart, Duanchen Sun, Bence Szalai, Hao Tang, Jing Tang, Aviad Tsherniak, Vladislav Uzunangelov, Francisca Vazquez, Tao Wang, Difei Wang, Barbara A. Weir, Krister Wennerberg, Ling-yun Wu, Guanghua Xiao, Yang Xie, Jieping Ye, Yuting Ye, Xiaowei Zhan, Wanding Zhou, Fan Zhu |
A Community Challenge for Inferring Genetic Predictors of Gene Essentialities through Analysis of a Functional Screen of Cancer Cell Lines |
|
A Community Challenge for Inferring Genetic Predictors of Gene Essentialities through Analysis of a Functional Screen of Cancer Cell Lines |
Cell Systems, 5, 5, 485-497 |
, 5, 5, 485-497 |
Cell Systems, 5, 5, 485-497 |
2017/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Takigawa, I. and Mamitsuka, H. |
|
Takigawa, I. and Mamitsuka, H. |
Generalized Sparse Learning of Linear Models over the Complete Subgraph Feature Set. |
|
Generalized Sparse Learning of Linear Models over the Complete Subgraph Feature Set. |
IEEE Transactions on Pattern Analysis and Machine Intelligence, 39, 3, 617-624 |
, 39, 3, 617-624 |
IEEE Transactions on Pattern Analysis and Machine Intelligence, 39, 3, 617-624 |
2017/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Karasuyama, M. and Mamitsuka, H. |
|
Karasuyama, M. and Mamitsuka, H. |
Adaptive Edge Weighting for Graph-Based Learning Algorithms. |
|
Adaptive Edge Weighting for Graph-Based Learning Algorithms. |
Machine Learning, 106, 2, 307-335 |
, 106, 2, 307-335 |
Machine Learning, 106, 2, 307-335 |
2017/02 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Yotsukura, S., duVerle D., Hancock, T., Natsume-Kitatani, Y. and Mamitsuka, H. |
|
Yotsukura, S., duVerle D., Hancock, T., Natsume-Kitatani, Y. and Mamitsuka, H. |
Computational Recognition for Long Non-coding RNA (lncRNA): Software and Databases. |
|
Computational Recognition for Long Non-coding RNA (lncRNA): Software and Databases. |
Briefings in Bioinformatics, 18, 1, 9-27 |
, 18, 1, 9-27 |
Briefings in Bioinformatics, 18, 1, 9-27 |
2017/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Yotsukura Sohiya, Karasuyama Masayuki, Takigawa Ichigaku, Mamitsuka Hiroshi |
|
Yotsukura Sohiya, Karasuyama Masayuki, Takigawa Ichigaku, Mamitsuka Hiroshi |
Exploring Phenotype Patterns of Breast Cancer within Somatic Mutations |
|
Exploring Phenotype Patterns of Breast Cancer within Somatic Mutations |
Briefings in Bioinformatics, 18, 4, 619-633 |
, 18, 4, 619-633 |
Briefings in Bioinformatics, 18, 4, 619-633 |
2017 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Yamada M, Lian W, Goyal A, Chen J, Wimalawarne K, Khan S.A, Kaski S, Mamitsuka H, Chang Y. |
|
Yamada M, Lian W, Goyal A, Chen J, Wimalawarne K, Khan S.A, Kaski S, Mamitsuka H, Chang Y. |
Convex Factorization Machine for Toxicogenomics Prediction |
|
Convex Factorization Machine for Toxicogenomics Prediction |
Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 1215-1224 |
, 1215-1224 |
Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 1215-1224 |
2017 |
有 |
|
|
公開 |
| Zhou Shuigeng, Chen Phoebe Yi-Ping, Mamitsuka Hiroshi |
|
Zhou Shuigeng, Chen Phoebe Yi-Ping, Mamitsuka Hiroshi |
Introduction to the special issue on GIW 2016 |
|
Introduction to the special issue on GIW 2016 |
Journal of Bioinformatics and Computational Biology, 14, 5 |
, 14, 5 |
Journal of Bioinformatics and Computational Biology, 14, 5 |
2016/10 |
有 |
|
|
公開 |
| Johnston, I., Hancock, T., Mamitsuka, H. and Carvalho, L. |
|
Johnston, I., Hancock, T., Mamitsuka, H. and Carvalho, L. |
Gene-proximity Models for Genome-Wide Association Studies. |
|
Gene-proximity Models for Genome-Wide Association Studies. |
Annals of Applied Statistics, 10, 3, 1217-1244 |
, 10, 3, 1217-1244 |
Annals of Applied Statistics, 10, 3, 1217-1244 |
2016/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Gao, J., Yamada, M., Kaski, S., Mamitsuka, H. and Zhu, S. |
|
Gao, J., Yamada, M., Kaski, S., Mamitsuka, H. and Zhu, S. |
A Robust Convex Formulations for Ensemble Clustering. |
|
A Robust Convex Formulations for Ensemble Clustering. |
Proceedings of the 25th International Joint Conference on Artificial Intelligence (IJCAI 2016), 1476-1482 |
, 1476-1482 |
Proceedings of the 25th International Joint Conference on Artificial Intelligence (IJCAI 2016), 1476-1482 |
2016/07 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Mohamed, A., Nguyen, C. H. and Mamitsuka, H. |
|
Mohamed, A., Nguyen, C. H. and Mamitsuka, H. |
NMRPro: An Integrated Web Component for Interactive Processing and Visualization of NMR Spectra. |
|
NMRPro: An Integrated Web Component for Interactive Processing and Visualization of NMR Spectra. |
Bioinformatics, 32, 13, 2067-2068 |
, 32, 13, 2067-2068 |
Bioinformatics, 32, 13, 2067-2068 |
2016/07 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Yuan, Q.-J., Gao, J., Wu, D., Zhang, S., Mamitsuka, H. and Zhu, S. |
|
Yuan, Q.-J., Gao, J., Wu, D., Zhang, S., Mamitsuka, H. and Zhu, S. |
DrugE-Rank: Improving Drug-Target Interaction Prediction of New Candidate Drugs or Targets by Ensemble Learning to Rank. |
|
DrugE-Rank: Improving Drug-Target Interaction Prediction of New Candidate Drugs or Targets by Ensemble Learning to Rank. |
Bioinformatics (Proceedings of the 24th International Conference on Intelligent Systems for Molecular Biology (ISMB 2016)), 32, 12, i18-i27 |
, 32, 12, i18-i27 |
Bioinformatics (Proceedings of the 24th International Conference on Intelligent Systems for Molecular Biology (ISMB 2016)), 32, 12, i18-i27 |
2016/06 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Peng, S., You, R., Wang, H., Zhai, C., Mamitsuka, H. and Zhu, S. |
|
Peng, S., You, R., Wang, H., Zhai, C., Mamitsuka, H. and Zhu, S. |
DeepMeSH: Deep Semantic Representation for Improving Large-scale MeSH Indexing. |
|
DeepMeSH: Deep Semantic Representation for Improving Large-scale MeSH Indexing. |
Bioinformatics (Proceedings of the 24th International Conference on Intelligent Systems for Molecular Biology (ISMB 2016)), 32, 12, i70-i78 |
, 32, 12, i70-i78 |
Bioinformatics (Proceedings of the 24th International Conference on Intelligent Systems for Molecular Biology (ISMB 2016)), 32, 12, i70-i78 |
2016/06 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Nguyen, C. H. and Mamitsuka, H. |
|
Nguyen, C. H. and Mamitsuka, H. |
New Resistance Distances with Global Information on Large Graphs. |
|
New Resistance Distances with Global Information on Large Graphs. |
JMLR Workshop and Conference Proceedings (Proceedings of the Nineteenth International Conference on Artificial Intelligence and Statistics (AISTATS 2016)), 51, 639-647 |
, 51, 639-647 |
JMLR Workshop and Conference Proceedings (Proceedings of the Nineteenth International Conference on Artificial Intelligence and Statistics (AISTATS 2016)), 51, 639-647 |
2016/05 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Xu, Y., Luo, C., Mamitsuka, H. and Zhu, S. |
|
Xu, Y., Luo, C., Mamitsuka, H. and Zhu, S. |
MetaMHCpan, A Meta Apporach for Pan-specific MHC Peptide Binding Prediction. |
|
MetaMHCpan, A Meta Apporach for Pan-specific MHC Peptide Binding Prediction. |
Methods in Molecular Biology, 1404, 753-760 |
, 1404, 753-760 |
Methods in Molecular Biology, 1404, 753-760 |
2016/04 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Shinkai-Ouchi, F., Koyama, S., Ono, Y., Hata, S., Ojima, K., Shindo, M., duVerle, D., Kitamura, F., Doi, N., Takigawa, I., Mamitsuka, H. and Sorimachi, H. |
|
Shinkai-Ouchi, F., Koyama, S., Ono, Y., Hata, S., Ojima, K., Shindo, M., duVerle, D., Kitamura, F., Doi, N., Takigawa, I., Mamitsuka, H. and Sorimachi, H. |
Predictions of Cleavability of Calpain Proteolysis by Quantitative Structure-Activity Relationship Analysis Using Newly Determined Cleavage Sites and Catalytic Efficiencies of an Oligopeptide Array. |
|
Predictions of Cleavability of Calpain Proteolysis by Quantitative Structure-Activity Relationship Analysis Using Newly Determined Cleavage Sites and Catalytic Efficiencies of an Oligopeptide Array. |
Molecular and Cellular Proteomics, 15, 4, 1262-1280 |
, 15, 4, 1262-1280 |
Molecular and Cellular Proteomics, 15, 4, 1262-1280 |
2016/04 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mohamed, A., Nguyen, C. H. and Mamitsuka, H. |
|
Mohamed, A., Nguyen, C. H. and Mamitsuka, H. |
Current Status and Prospects of Computational Resources for Natural Product Dereplication: A Review. |
|
Current Status and Prospects of Computational Resources for Natural Product Dereplication: A Review. |
Briefings in Bioinformatics, 17, 2, 309-321 |
, 17, 2, 309-321 |
Briefings in Bioinformatics, 17, 2, 309-321 |
2016/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Natsume-Kitatani, Y. and Mamitsuka, H. |
|
Natsume-Kitatani, Y. and Mamitsuka, H. |
Classification of Promoters based on the Combination of Core Promoter Elements Exhibits Different Histone Modification Patterns. |
|
Classification of Promoters based on the Combination of Core Promoter Elements Exhibits Different Histone Modification Patterns. |
PLoS One, 11, 3, e0151917 |
, 11, 3, e0151917 |
PLoS One, 11, 3, e0151917 |
2016/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Nakamura, A., Takigawa, I., Tosaka, H., Kudo, M. and Mamitsuka, H. |
|
Nakamura, A., Takigawa, I., Tosaka, H., Kudo, M. and Mamitsuka, H. |
Mining Approximate Patterns with Frequent Locally Optimal Occurrences. |
|
Mining Approximate Patterns with Frequent Locally Optimal Occurrences. |
Discrete Applied Mathematics, 200, 123-152 |
, 200, 123-152 |
Discrete Applied Mathematics, 200, 123-152 |
2016/02 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Wicker, N., Nguyen, C. H. and Mamitsuka, H. |
|
Wicker, N., Nguyen, C. H. and Mamitsuka, H. |
Some Properties of a Dissimilarity Measure for Labeled Graphs. |
|
Some Properties of a Dissimilarity Measure for Labeled Graphs. |
Publications Mathématiques de Besançon: Algèbre et Théorie des Nombres, 85-94 |
, 85-94 |
Publications Mathématiques de Besançon: Algèbre et Théorie des Nombres, 85-94 |
2016 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Yotsukura, S., Karasuyama, M., Takigawa, I. and Mamitsuka, H. |
|
Yotsukura, S., Karasuyama, M., Takigawa, I. and Mamitsuka, H. |
A Bioinformatics Approach for Understanding Genotype-phenotype Correlation in Breast Cancer. |
|
A Bioinformatics Approach for Understanding Genotype-phenotype Correlation in Breast Cancer. |
Big Data Analytics in Genomics, 397-428 |
, 397-428 |
Big Data Analytics in Genomics, 397-428 |
2016 |
有 |
英語 |
研究論文(その他学術会議資料等) |
公開 |
| Zhou, J., Shui, Y., Peng, S., Li, X., Mamitsuka, H. and Zhu, S. |
|
Zhou, J., Shui, Y., Peng, S., Li, X., Mamitsuka, H. and Zhu, S. |
MeSHSim: An R/Bioconductor Package for Measuring Semantic Similarity over MeSH Headings and MEDLINE Documents. |
|
MeSHSim: An R/Bioconductor Package for Measuring Semantic Similarity over MeSH Headings and MEDLINE Documents. |
Journal of Bioinformatics and Computational Biology, 13, 6, 1542002 |
, 13, 6, 1542002 |
Journal of Bioinformatics and Computational Biology, 13, 6, 1542002 |
2015/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Baba, H, Takahara, J. and Mamitsuka, H. |
|
Baba, H, Takahara, J. and Mamitsuka, H. |
In Silico Predictions of Human Skin Permeability using Nonlinear Quantitative Structure-Property Relationship Models. |
|
In Silico Predictions of Human Skin Permeability using Nonlinear Quantitative Structure-Property Relationship Models. |
Pharmaceutical Research, 32, 7, 2360-2371 |
, 32, 7, 2360-2371 |
Pharmaceutical Research, 32, 7, 2360-2371 |
2015/07 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Zheng, X., Zhu, S., Gao, J. and Mamitsuka, H. |
|
Zheng, X., Zhu, S., Gao, J. and Mamitsuka, H. |
Instance-wise Weighted Nonnegative Matrix Factorization for Aggregating Partitions with Locally Reliable Clusters. |
|
Instance-wise Weighted Nonnegative Matrix Factorization for Aggregating Partitions with Locally Reliable Clusters. |
Proceedings of the 24th International Joint Conference on Artificial Intelligence (IJCAI 2015), 4091-4097 |
, 4091-4097 |
Proceedings of the 24th International Joint Conference on Artificial Intelligence (IJCAI 2015), 4091-4097 |
2015/07 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Shiga, M. and Mamitsuka, H. |
|
Shiga, M. and Mamitsuka, H. |
Non-negative Matrix Factorization with Auxiliary Information on Overlapping Groups. |
|
Non-negative Matrix Factorization with Auxiliary Information on Overlapping Groups. |
IEEE Transactions on Knowledge and Data Engineering, 27, 6, 1615-1628 |
, 27, 6, 1615-1628 |
IEEE Transactions on Knowledge and Data Engineering, 27, 6, 1615-1628 |
2015/06 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Liu, K., Peng, S., Wu, J., Zhai, C., Mamitsuka H. and Zhu S. |
|
Liu, K., Peng, S., Wu, J., Zhai, C., Mamitsuka H. and Zhu S. |
MeSHLabeler: Improving the Accuracy of Large-scale MeSH indexing by Integrating Diverse Evidence. |
|
MeSHLabeler: Improving the Accuracy of Large-scale MeSH indexing by Integrating Diverse Evidence. |
Bioinformatics (Proceedings of the 23rd International Conference on Intelligent Systems for Molecular Biology (ISMB/ECCB 2015)), 31, 12, i339-i347 |
, 31, 12, i339-i347 |
Bioinformatics (Proceedings of the 23rd International Conference on Intelligent Systems for Molecular Biology (ISMB/ECCB 2015)), 31, 12, i339-i347 |
2015/06 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Wang, B., Chen, X., Mamitsuka, H. and Zhu, S. |
|
Wang, B., Chen, X., Mamitsuka, H. and Zhu, S. |
BMExpert: Mining MEDLINE for Finding Experts in Biomedical Domains Based on Language Model |
|
BMExpert: Mining MEDLINE for Finding Experts in Biomedical Domains Based on Language Model |
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 12, 6, 1286-1294 |
, 12, 6, 1286-1294 |
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 12, 6, 1286-1294 |
2015/06 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Yotsukura, S. and Mamitsuka, H. |
|
Yotsukura, S. and Mamitsuka, H. |
Evaluation of Serum-based Cancer Biomarkers: A Brief Review from a Clinical and Computational Viewpoint. |
|
Evaluation of Serum-based Cancer Biomarkers: A Brief Review from a Clinical and Computational Viewpoint. |
Critical Reviews in Oncology/Hematology, 93, 2, 103-115 |
, 93, 2, 103-115 |
Critical Reviews in Oncology/Hematology, 93, 2, 103-115 |
2015/02 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mohamed, A., Hancock, T., Nguyen, C. H. and Mamitsuka, H. |
|
Mohamed, A., Hancock, T., Nguyen, C. H. and Mamitsuka, H. |
NetPathMiner:R/Bioconductor Package for Network Path Mining through Gene Expression. |
|
NetPathMiner:R/Bioconductor Package for Network Path Mining through Gene Expression. |
Bioinformatics, 30, 21, 3139-3141 |
, 30, 21, 3139-3141 |
Bioinformatics, 30, 21, 3139-3141 |
2014/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ding, H., Takigawa, I., Mamitsuka, H. and Zhu, S. |
|
Ding, H., Takigawa, I., Mamitsuka, H. and Zhu, S. |
Similarity-based Machine Learning Methods for Predicting Drug-target Interactions: A Brief Review. |
|
Similarity-based Machine Learning Methods for Predicting Drug-target Interactions: A Brief Review. |
Briefings in Bioinformatics, 15, 5, 737-747 |
, 15, 5, 737-747 |
Briefings in Bioinformatics, 15, 5, 737-747 |
2014/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Nguyen, C. H., Wicker, N. and Mamitsuka, H. |
|
Nguyen, C. H., Wicker, N. and Mamitsuka, H. |
Selecting Graph Cut Solutions via Global Graph Similarity |
|
Selecting Graph Cut Solutions via Global Graph Similarity |
IEEE Transactions on Neural Networks and Learning Systems, 25, 7, 1407-1412 |
, 25, 7, 1407-1412 |
IEEE Transactions on Neural Networks and Learning Systems, 25, 7, 1407-1412 |
2014/07 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Kayano, M., Shiga, M. and Mamitsuka, H. |
|
Kayano, M., Shiga, M. and Mamitsuka, H. |
Detecting Differentially Coexpressed Genes from Labeled Expression Data:A Brief Review. |
|
Detecting Differentially Coexpressed Genes from Labeled Expression Data:A Brief Review. |
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 11, 1, 154-167 |
, 11, 1, 154-167 |
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 11, 1, 154-167 |
2014/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Karasuyama, M. and Mamitsuka, H. |
|
Karasuyama, M. and Mamitsuka, H. |
Multiple Graph Label Propagation by Sparse Integration. |
|
Multiple Graph Label Propagation by Sparse Integration. |
IEEE Transactions on Neural Networks and Learning Systems, 24, 12, 1999-2012 |
, 24, 12, 1999-2012 |
IEEE Transactions on Neural Networks and Learning Systems, 24, 12, 1999-2012 |
2013/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Takahashi, K., Takigawa, I. and Mamitsuka, H. |
|
Takahashi, K., Takigawa, I. and Mamitsuka, H. |
SiBIC: A Web Server for Generating Gene Set Networks Based on Biclusters Obtained by Maximal Frequent Itemset Mining. |
|
SiBIC: A Web Server for Generating Gene Set Networks Based on Biclusters Obtained by Maximal Frequent Itemset Mining. |
PLoS ONE, 8, 12, e82890 |
, 8, 12, e82890 |
PLoS ONE, 8, 12, e82890 |
2013/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Karasuyama, M. and Mamitsuka, H. |
|
Karasuyama, M. and Mamitsuka, H. |
Manifold-based Similarity Adaptation for Label Propagation. |
|
Manifold-based Similarity Adaptation for Label Propagation. |
Proceedings of the Twenty-Seventh Annual Conference on Neural Information Processing Systems (NIPS 2013), 1547-1555 |
, 1547-1555 |
Proceedings of the Twenty-Seventh Annual Conference on Neural Information Processing Systems (NIPS 2013), 1547-1555 |
2013/12 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Zheng, X., Ding, H., Mamitsuka, H. and Zhu, S. |
|
Zheng, X., Ding, H., Mamitsuka, H. and Zhu, S. |
Collaborative Matrix Factorization with Multiple Similarities for Predicting Drug-Target Interactions. |
|
Collaborative Matrix Factorization with Multiple Similarities for Predicting Drug-Target Interactions. |
Proceedings of the Nineteenth ACM SIGKDD International Conference On Knowledge Discovery and Data Mining (KDD 2013), 1025-1033 |
, 1025-1033 |
Proceedings of the Nineteenth ACM SIGKDD International Conference On Knowledge Discovery and Data Mining (KDD 2013), 1025-1033 |
2013/08 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Shiga, M. and Mamitsuka, H. |
|
Shiga, M. and Mamitsuka, H. |
Variational Bayes Co-clustering with Auxiliary Information. |
|
Variational Bayes Co-clustering with Auxiliary Information. |
Proceedings of the 4th MultiClust Workshop on Multiple Clusterings, Multi-view Data, and Multi-source Knowledge-driven Clustering (MultiClust 2013), Article No.5 |
, Article No.5 |
Proceedings of the 4th MultiClust Workshop on Multiple Clusterings, Multi-view Data, and Multi-source Knowledge-driven Clustering (MultiClust 2013), Article No.5 |
2013/08 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Gu, J., Feng, W., Zeng, J., Mamitsuka, H. and Zhu, S. |
|
Gu, J., Feng, W., Zeng, J., Mamitsuka, H. and Zhu, S. |
Efficient Semi-supervised MEDLINE Document Clustering with MeSH Semantic and Global Content Constraints. |
|
Efficient Semi-supervised MEDLINE Document Clustering with MeSH Semantic and Global Content Constraints. |
IEEE Transactions on Cybernetics, 43, 4, 1265-1276 |
, 43, 4, 1265-1276 |
IEEE Transactions on Cybernetics, 43, 4, 1265-1276 |
2013/07 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Nakamura, A., Saito, T., Takigawa, I., Kudo, M. and Mamitsuka, H. |
|
Nakamura, A., Saito, T., Takigawa, I., Kudo, M. and Mamitsuka, H. |
Fast Algorithms for Finding a Minimum Repetition Representation of Strings and Trees. |
|
Fast Algorithms for Finding a Minimum Repetition Representation of Strings and Trees. |
Discrete Applied Mathematics, 161, 10-11, 1556-1575 |
, 161, 10-11, 1556-1575 |
Discrete Applied Mathematics, 161, 10-11, 1556-1575 |
2013/07 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Wicker, N., Nguyen, C. H. and Mamitsuka, H. |
|
Wicker, N., Nguyen, C. H. and Mamitsuka, H. |
A New Dissimilarity Measure for Comparing Labeled Graphs. |
|
A New Dissimilarity Measure for Comparing Labeled Graphs. |
Linear Algebra and Its Applications, 438, 5, 2331-2338 |
, 438, 5, 2331-2338 |
Linear Algebra and Its Applications, 438, 5, 2331-2338 |
2013/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Yamamoto, T., Nakayama, K., Hirano, H., Tomonaga, T., Ishihama, Y., Yamada, T., Kondo, T., Kodera, Y., Sato, Y., Araki, N., Mamitsuka, H. and Goshima, N. |
|
Yamamoto, T., Nakayama, K., Hirano, H., Tomonaga, T., Ishihama, Y., Yamada, T., Kondo, T., Kodera, Y., Sato, Y., Araki, N., Mamitsuka, H. and Goshima, N. |
Integrated View of the Human Chromosome X-centric Proteome Project. |
|
Integrated View of the Human Chromosome X-centric Proteome Project. |
Journal of Proteome Research, 12, 1, 58-61 |
, 12, 1, 58-61 |
Journal of Proteome Research, 12, 1, 58-61 |
2013/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Takigawa, I. and Mamitsuka, H. |
|
Takigawa, I. and Mamitsuka, H. |
Graph Mining: Procedure, Application to Drug Discovery and Recent Advance. |
|
Graph Mining: Procedure, Application to Drug Discovery and Recent Advance. |
Drug Discovery Today, 18, 1-2, 50-57 |
, 18, 1-2, 50-57 |
Drug Discovery Today, 18, 1-2, 50-57 |
2013/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mamitsuka, H., DeLisi, C., and Kanehisa, M. |
|
Mamitsuka, H., DeLisi, C., and Kanehisa, M. |
Preface |
|
Preface |
Methods in Molecular Biology, 939, v-vii |
, 939, v-vii |
Methods in Molecular Biology, 939, v-vii |
2013 |
|
英語 |
|
公開 |
| duVerle, D. A. and Mamitsuka, H. |
|
duVerle, D. A. and Mamitsuka, H. |
Machine learning sequence classification techniques: Application to cysteine protease cleavage prediction |
|
Machine learning sequence classification techniques: Application to cysteine protease cleavage prediction |
Current Bioinformatics, 7, 4, 415-423 |
, 7, 4, 415-423 |
Current Bioinformatics, 7, 4, 415-423 |
2012/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Hancock. T. and Mamitsuka, H. |
|
Hancock. T. and Mamitsuka, H. |
Boosted Network Classifiers for Local Feature Selection. |
|
Boosted Network Classifiers for Local Feature Selection. |
IEEE Transactions on Neural Networks and Learning Systems, 23, 11, 1767-1778 |
, 23, 11, 1767-1778 |
IEEE Transactions on Neural Networks and Learning Systems, 23, 11, 1767-1778 |
2012/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Nguyen, C. H. and Mamitsuka, H. |
|
Nguyen, C. H. and Mamitsuka, H. |
Latent Feature Kernels for Link Prediction on Sparse Graphs. |
|
Latent Feature Kernels for Link Prediction on Sparse Graphs. |
IEEE Transactions on Neural Networks and Learning Systems, 23, 11, 1793-1804 |
, 23, 11, 1793-1804 |
IEEE Transactions on Neural Networks and Learning Systems, 23, 11, 1793-1804 |
2012/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Sorimachi, H., Mamitsuka, H. and Ono, Y. |
|
Sorimachi, H., Mamitsuka, H. and Ono, Y. |
Understanding the Substrate Specificity of Conventional Calpains. |
|
Understanding the Substrate Specificity of Conventional Calpains. |
Biological Chemistry, 393, 9, 853-871 |
, 393, 9, 853-871 |
Biological Chemistry, 393, 9, 853-871 |
2012/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
Mining from Protein-Protein Interactions. |
|
Mining from Protein-Protein Interactions. |
Wiley Interdisciplinary Reviews: Data Mining and Knowledge Discovery, 2, 5, 400-410 |
, 2, 5, 400-410 |
Wiley Interdisciplinary Reviews: Data Mining and Knowledge Discovery, 2, 5, 400-410 |
2012/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| duVerle, D. A. and Mamitsuka, H. |
|
duVerle, D. A. and Mamitsuka, H. |
A Review of Statistical Methods for Prediction of Proteolytic Cleavage. |
|
A Review of Statistical Methods for Prediction of Proteolytic Cleavage. |
Briefings in Bioinformatics, 13, 3, 337-349 |
, 13, 3, 337-349 |
Briefings in Bioinformatics, 13, 3, 337-349 |
2012/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Zhang, L, Udaka, K, Mamitsuka, H. and Zhu, S. |
|
Zhang, L, Udaka, K, Mamitsuka, H. and Zhu, S. |
Toward More Accurate Pan-Specific MHC-Peptide Binding Prediction: A Review of Current Methods and Tools. |
|
Toward More Accurate Pan-Specific MHC-Peptide Binding Prediction: A Review of Current Methods and Tools. |
Briefings in Bioinformatics, 13, 3, 350-364 |
, 13, 3, 350-364 |
Briefings in Bioinformatics, 13, 3, 350-364 |
2012/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Shiga, M. and Mamitsuka, H. |
|
Shiga, M. and Mamitsuka, H. |
A Variational Bayesian Framework for Clustering with Multiple Graphs. |
|
A Variational Bayesian Framework for Clustering with Multiple Graphs. |
IEEE Transactions on Knowledge and Data Engineering, 24, 4, 577-589 |
, 24, 4, 577-589 |
IEEE Transactions on Knowledge and Data Engineering, 24, 4, 577-589 |
2012/04 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Shiga, M. and Mamitsuka, H. |
|
Shiga, M. and Mamitsuka, H. |
Efficient Semi-Supervised Learning on Locally Informative Multiple Graphs. |
|
Efficient Semi-Supervised Learning on Locally Informative Multiple Graphs. |
Pattern Recognition, 45, 3, 1035-1049 |
, 45, 3, 1035-1049 |
Pattern Recognition, 45, 3, 1035-1049 |
2012/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Hancock, T, Wicker, N., Takigawa, I. and Mamitsuka, H. |
|
Hancock, T, Wicker, N., Takigawa, I. and Mamitsuka, H. |
Identifying Neighborhoods of Coordinated Gene Expression and Metabolite Profiles. |
|
Identifying Neighborhoods of Coordinated Gene Expression and Metabolite Profiles. |
PLoS ONE, 7, 2, e31345 |
, 7, 2, e31345 |
PLoS ONE, 7, 2, e31345 |
2012/02 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Zhang, L, Chen, Y., Wong, H.-S., Zhou, S., Mamitsuka, H. and Zhu, S. |
|
Zhang, L, Chen, Y., Wong, H.-S., Zhou, S., Mamitsuka, H. and Zhu, S. |
TEPITOPEpan: Extending TEPITOPE for Peptide Binding Prediction Covering over 700 HLA-DR Molecules. |
|
TEPITOPEpan: Extending TEPITOPE for Peptide Binding Prediction Covering over 700 HLA-DR Molecules. |
PLoS ONE, 7, 2, e30483 |
, 7, 2, e30483 |
PLoS ONE, 7, 2, e30483 |
2012/02 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Shiga, M. and Mamitsuka, H. |
|
Shiga, M. and Mamitsuka, H. |
Clustering Genes with Expression and Beyond. |
|
Clustering Genes with Expression and Beyond. |
Wiley Interdisciplinary Reviews: Data Mining and Knowledge Discovery, 1, 6, 496-511 |
, 1, 6, 496-511 |
Wiley Interdisciplinary Reviews: Data Mining and Knowledge Discovery, 1, 6, 496-511 |
2011/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Hu, X., Mamitsuka, H. and Zhu, S. |
|
Hu, X., Mamitsuka, H. and Zhu, S. |
Ensemble Approaches for Improving HLA Class I-peptide Binding Prediction. |
|
Ensemble Approaches for Improving HLA Class I-peptide Binding Prediction. |
Journal of Immunological Methods, 374, 1-2, 47-52 |
, 374, 1-2, 47-52 |
Journal of Immunological Methods, 374, 1-2, 47-52 |
2011/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Nguyen, C. H. and Mamitsuka, H. |
|
Nguyen, C. H. and Mamitsuka, H. |
Kernels for Link Prediction with Latent Feature Models. |
|
Kernels for Link Prediction with Latent Feature Models. |
Lecture Notes in Computer Science (Proceedings of the European Conference on Machine Learning and Principles and Practice of Knowledge Discovery of Databases (ECML/PKDD 2011)), 6912, II, 517-532 |
, 6912, II, 517-532 |
Lecture Notes in Computer Science (Proceedings of the European Conference on Machine Learning and Principles and Practice of Knowledge Discovery of Databases (ECML/PKDD 2011)), 6912, II, 517-532 |
2011/09 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Nguyen, C. H. and Mamitsuka, H. |
|
Nguyen, C. H. and Mamitsuka, H. |
Discriminative Graph Embedding for Label Propagation. |
|
Discriminative Graph Embedding for Label Propagation. |
IEEE Transactions on Neural Networks, 22, 9, 1395-1405 |
, 22, 9, 1395-1405 |
IEEE Transactions on Neural Networks, 22, 9, 1395-1405 |
2011/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Natsume-Kitatani, Y., Shiga, M. and Mamitsuka, H. |
|
Natsume-Kitatani, Y., Shiga, M. and Mamitsuka, H. |
Genome-wide Integration on Transcription Factors, Histone Acetylation and Gene Expression Reveals Genes Co-regulated by Histone Modification Patterns. |
|
Genome-wide Integration on Transcription Factors, Histone Acetylation and Gene Expression Reveals Genes Co-regulated by Histone Modification Patterns. |
PLoS ONE, 6, 7, e22281 |
, 6, 7, e22281 |
PLoS ONE, 6, 7, e22281 |
2011/07 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Kayano, M., Takigawa, I., Shiga, M., Tsuda, K. and Mamitsuka, H. |
|
Kayano, M., Takigawa, I., Shiga, M., Tsuda, K. and Mamitsuka, H. |
ROS-DET: Robust Detector of Switching Mechanisms in Gene Expression. |
|
ROS-DET: Robust Detector of Switching Mechanisms in Gene Expression. |
Nucleic Acids Research, 39, 11, e74 |
, 39, 11, e74 |
Nucleic Acids Research, 39, 11, e74 |
2011/06 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| duVerle, D., Ono, Y., Sorimachi, H. and Mamitsuka, H. |
|
duVerle, D., Ono, Y., Sorimachi, H. and Mamitsuka, H. |
Calpain Cleavage Prediction Using Multiple Kernel Learning. |
|
Calpain Cleavage Prediction Using Multiple Kernel Learning. |
PLoS ONE, 6, 5, e19035 |
, 6, 5, e19035 |
PLoS ONE, 6, 5, e19035 |
2011/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Shiga, M., Takigawa, I. and Mamitsuka, H. |
|
Shiga, M., Takigawa, I. and Mamitsuka, H. |
A Spectral Approach to Clustering Numerical Vectors as Nodes in a Network. |
|
A Spectral Approach to Clustering Numerical Vectors as Nodes in a Network. |
Pattern Recognition, 44, 2, 236-251 |
, 44, 2, 236-251 |
Pattern Recognition, 44, 2, 236-251 |
2011/02 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Takigawa, I. and Mamitsuka, H. |
|
Takigawa, I. and Mamitsuka, H. |
Efficiently Mining δ-tolerance Closed Frequent Subgraphs |
|
Efficiently Mining δ-tolerance Closed Frequent Subgraphs |
Machine Learning, 82, 2, 95-121 |
, 82, 2, 95-121 |
Machine Learning, 82, 2, 95-121 |
2011/02 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Takigawa, I., Tsuda, K. and Mamitsuka, H. |
|
Takigawa, I., Tsuda, K. and Mamitsuka, H. |
Mining Significant Substructure Pairs for Interpreting Polypharmacology in Drug-target Network. |
|
Mining Significant Substructure Pairs for Interpreting Polypharmacology in Drug-target Network. |
PLoS ONE, 6, 2, e16999 |
, 6, 2, e16999 |
PLoS ONE, 6, 2, e16999 |
2011/02 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
Glycoinformatics: Data Mining-based Approaches. |
|
Glycoinformatics: Data Mining-based Approaches. |
Chimia, 65, 1-2, 10-13 |
, 65, 1-2, 10-13 |
Chimia, 65, 1-2, 10-13 |
2011/01 |
|
英語 |
研究論文(学術雑誌) |
公開 |
| Takigawa, I., Hashimoto, K., Shiga, M., Kanehisa, M. and Mamitsuka, H. |
|
Takigawa, I., Hashimoto, K., Shiga, M., Kanehisa, M. and Mamitsuka, H. |
Mining Patterns from Glycan Structures. |
|
Mining Patterns from Glycan Structures. |
Proceedings of the International Beilstein Symposium on Glyco-Bioinformatics, 13-24 |
, 13-24 |
Proceedings of the International Beilstein Symposium on Glyco-Bioinformatics, 13-24 |
2010/12 |
|
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Nakamura, A., Saito, T., Takigawa, I., Mamitsuka, H. and Kudo, M. |
|
Nakamura, A., Saito, T., Takigawa, I., Mamitsuka, H. and Kudo, M. |
Algorithms for Finding a Minimum Repetition Representation of a String. |
|
Algorithms for Finding a Minimum Repetition Representation of a String. |
Lecture Notes in Computer Science (Proceedings of the Seventeenth Symposium on String Processing and Information Retrieval (SPIRE 2010)), 6393, 185-190 |
, 6393, 185-190 |
Lecture Notes in Computer Science (Proceedings of the Seventeenth Symposium on String Processing and Information Retrieval (SPIRE 2010)), 6393, 185-190 |
2010/10 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Li, L., Ching, W-K., Chan, Y-M. and Mamitsuka, H. |
|
Li, L., Ching, W-K., Chan, Y-M. and Mamitsuka, H. |
On Network-based Kernel Methods for Protein-Protein Interactions with Applications in Protein Functions Prediction. |
|
On Network-based Kernel Methods for Protein-Protein Interactions with Applications in Protein Functions Prediction. |
Journal of Systems Science and Complexity, 23, 5, 917-930 |
, 23, 5, 917-930 |
Journal of Systems Science and Complexity, 23, 5, 917-930 |
2010/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Shiga, M. and Mamitsuka, H. |
|
Shiga, M. and Mamitsuka, H. |
Variational Bayes Learning over Multiple Graphs. |
|
Variational Bayes Learning over Multiple Graphs. |
Proceedings of the IEEE International Workshop on Machine Learning for Signal Processing (MLSP 2010), 166-171 |
, 166-171 |
Proceedings of the IEEE International Workshop on Machine Learning for Signal Processing (MLSP 2010), 166-171 |
2010/09 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Lam, T. H., Mamitsuka, H., Ren, E. C., and Tong, J. C. |
|
Lam, T. H., Mamitsuka, H., Ren, E. C., and Tong, J. C. |
TAP Hunter: A SVM-based System for Predicting TAP Ligands using Local Description of Amino Acid Sequence. |
|
TAP Hunter: A SVM-based System for Predicting TAP Ligands using Local Description of Amino Acid Sequence. |
Immunome Research (Proceedings of the Ninth International Conference on Bioinformatics (InCoB 2010)), 6, SUPPL. 1, S6 |
, 6, SUPPL. 1, S6 |
Immunome Research (Proceedings of the Ninth International Conference on Bioinformatics (InCoB 2010)), 6, SUPPL. 1, S6 |
2010/09 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Hancock, T., Takigawa, I. and Mamitsuka, H. |
|
Hancock, T., Takigawa, I. and Mamitsuka, H. |
Mining Metabolic Pathways through Gene Expression. |
|
Mining Metabolic Pathways through Gene Expression. |
Bioinformatics, 26, 17, 2128-2135 |
, 26, 17, 2128-2135 |
Bioinformatics, 26, 17, 2128-2135 |
2010/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Kayano, M., Takigawa, I., Shiga, M., Tsuda, K. and Mamitsuka, H. |
|
Kayano, M., Takigawa, I., Shiga, M., Tsuda, K. and Mamitsuka, H. |
On the Performance of Methods for Finding a Switching Mechanism in Gene Expression. |
|
On the Performance of Methods for Finding a Switching Mechanism in Gene Expression. |
Genome Informatics (Proceedings of the Tenth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2010)), 24, 69-83 |
, 24, 69-83 |
Genome Informatics (Proceedings of the Tenth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2010)), 24, 69-83 |
2010/07 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Hu, X., Zhou, W., Udaka, K., Mamitsuka, H. and Zhu, S. |
|
Hu, X., Zhou, W., Udaka, K., Mamitsuka, H. and Zhu, S. |
MetaMHC: A Meta Approach to Predict Peptides Binding to MHC Molecules. |
|
MetaMHC: A Meta Approach to Predict Peptides Binding to MHC Molecules. |
Nucleic Acids Research, 38, W474-W479 |
, 38, W474-W479 |
Nucleic Acids Research, 38, W474-W479 |
2010/07 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Hancock, T. and Mamitsuka, H. |
|
Hancock, T. and Mamitsuka, H. |
Boosted Optimization for Network Classification. |
|
Boosted Optimization for Network Classification. |
JMLR Workshop and Conference Proceedings (Proceedings of the Thirteenth International Conference on Artificial Intelligence and Statistics (AISTATS 2010)), 9, 305-312 |
, 9, 305-312 |
JMLR Workshop and Conference Proceedings (Proceedings of the Thirteenth International Conference on Artificial Intelligence and Statistics (AISTATS 2010)), 9, 305-312 |
2010/05 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Hancock, T. and Mamitsuka, H. |
|
Hancock, T. and Mamitsuka, H. |
A Markov Classification Model for Metabolic Pathways. |
|
A Markov Classification Model for Metabolic Pathways. |
Algorithms for Molecular Biology, 5, 1, 10 |
, 5, 1, 10 |
Algorithms for Molecular Biology, 5, 1, 10 |
2010/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Wan, R., Kiseleva, L., Harada, H., Mamitsuka, H. and Horton, P. |
|
Wan, R., Kiseleva, L., Harada, H., Mamitsuka, H. and Horton, P. |
HAMSTER: Visualizing Microarray Experiments as a Set of Minimum Spanning Trees. |
|
HAMSTER: Visualizing Microarray Experiments as a Set of Minimum Spanning Trees. |
Source Code for Biology and Medicine, 4, 1, Article 8 |
, 4, 1, Article 8 |
Source Code for Biology and Medicine, 4, 1, Article 8 |
2009/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Kayano, M., Takigawa, I., Shiga, M., Tsuda, K. and Mamitsuka, H. |
|
Kayano, M., Takigawa, I., Shiga, M., Tsuda, K. and Mamitsuka, H. |
Efficiently Finding Genome-wide Three-way Gene Interactions from Transcript- and Genotype-Data. |
|
Efficiently Finding Genome-wide Three-way Gene Interactions from Transcript- and Genotype-Data. |
Bioinformatics, 25, 21, 2735-2743 |
, 25, 21, 2735-2743 |
Bioinformatics, 25, 21, 2735-2743 |
2009/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Wan, R, Vo, A. N. and Mamitsuka, H. |
|
Wan, R, Vo, A. N. and Mamitsuka, H. |
Efficient Probabilistic Latent Semantic Analysis Through Parallelization. |
|
Efficient Probabilistic Latent Semantic Analysis Through Parallelization. |
Lecture Notes in Computer Science (Proceedings of the Fifth Asian Information Retrieval Symposium (AIRS 2009)), 5839, 432-443 |
, 5839, 432-443 |
Lecture Notes in Computer Science (Proceedings of the Fifth Asian Information Retrieval Symposium (AIRS 2009)), 5839, 432-443 |
2009/10 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Hancock, T. and Mamitsuka, H. |
|
Hancock, T. and Mamitsuka, H. |
A Markov Classification Model for Metabolic Pathways. |
|
A Markov Classification Model for Metabolic Pathways. |
Lecture Notes in Computer Science (Proceedings of the Ninth Workshop on Algorithms in Bioinformatics (WABI 2009)), 5724, 121-132 |
, 5724, 121-132 |
Lecture Notes in Computer Science (Proceedings of the Ninth Workshop on Algorithms in Bioinformatics (WABI 2009)), 5724, 121-132 |
2009/09 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Zhu, S., Takigawa, I., Zeng, J. and Mamitsuka, H. |
|
Zhu, S., Takigawa, I., Zeng, J. and Mamitsuka, H. |
Field Independent Probabilistic Model for Clustering Multi-Field Documents. |
|
Field Independent Probabilistic Model for Clustering Multi-Field Documents. |
Information Processing and Management, 45, 5, 555-570 |
, 45, 5, 555-570 |
Information Processing and Management, 45, 5, 555-570 |
2009/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Zhu, S., Zeng, J. and Mamitsuka, H. |
|
Zhu, S., Zeng, J. and Mamitsuka, H. |
Enhancing MEDLINE Document Clustering by Incorporating MeSH Semantic Similarity. |
|
Enhancing MEDLINE Document Clustering by Incorporating MeSH Semantic Similarity. |
Bioinformatics, 25, 15, 1944-1951 |
, 25, 15, 1944-1951 |
Bioinformatics, 25, 15, 1944-1951 |
2009/08 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Hancock, T. and Mamitsuka, H. |
|
Hancock, T. and Mamitsuka, H. |
Active Pathway Identification and Classification with Probabilistic Ensembles. |
|
Active Pathway Identification and Classification with Probabilistic Ensembles. |
Genome Informatics (Proceedings of the Ninth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2009)), 22, 30-40 |
, 22, 30-40 |
Genome Informatics (Proceedings of the Ninth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2009)), 22, 30-40 |
2009/07 |
|
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| duVerle, D. A,, Takigawa, I., Ono, Y., Sorimachi, H. and Mamitsuka, H. |
|
duVerle, D. A,, Takigawa, I., Ono, Y., Sorimachi, H. and Mamitsuka, H. |
CaMPDB: a Resource for Calpain and Modulatory Proteolysis. |
|
CaMPDB: a Resource for Calpain and Modulatory Proteolysis. |
Genome Informatics (Proceedings of the Ninth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2009)), 22, 202-214 |
, 22, 202-214 |
Genome Informatics (Proceedings of the Ninth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2009)), 22, 202-214 |
2009/07 |
|
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Li, L., Shiga, M., Ching, W.-K. and Mamitsuka, H. |
|
Li, L., Shiga, M., Ching, W.-K. and Mamitsuka, H. |
Annotating Gene Functions with Integrative Spectral Clustering on Microarray Expressions and Sequences. |
|
Annotating Gene Functions with Integrative Spectral Clustering on Microarray Expressions and Sequences. |
Genome Informatics (Proceedings of the Ninth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2009)), 22, 95-120 |
, 22, 95-120 |
Genome Informatics (Proceedings of the Ninth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2009)), 22, 95-120 |
2009/07 |
|
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Hashimoto, K., Takigawa, I., Shiga, M., Kanehisa, M. and Mamitsuka, H. |
|
Hashimoto, K., Takigawa, I., Shiga, M., Kanehisa, M. and Mamitsuka, H. |
Mining Significant Tree Patterns in Carbohydrate Sugar Chains. |
|
Mining Significant Tree Patterns in Carbohydrate Sugar Chains. |
Bioinformatics (Proceedings of the Seventh European Conference on Computational Biology (ECCB 2008)), 24, 16, i167-i173 |
, 24, 16, i167-i173 |
Bioinformatics (Proceedings of the Seventh European Conference on Computational Biology (ECCB 2008)), 24, 16, i167-i173 |
2008/08 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Hancock, T. and Mamitsuka, H. |
|
Hancock, T. and Mamitsuka, H. |
Semi-Supervised Graph Partitioning with Decision Trees. |
|
Semi-Supervised Graph Partitioning with Decision Trees. |
Genome Informatics (Proceedings of the Eighth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2008)), 20, 102-111 |
, 20, 102-111 |
Genome Informatics (Proceedings of the Eighth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2008)), 20, 102-111 |
2008/06 |
|
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Wan,, R. Wheelock, A. and Mamitsuka, H. |
|
Wan,, R. Wheelock, A. and Mamitsuka, H. |
A Framework for Determining Outlying Microarray Experiments. |
|
A Framework for Determining Outlying Microarray Experiments. |
Genome Informatics (Proceedings of the Eighth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2008)), 20, 64-76 |
, 20, 64-76 |
Genome Informatics (Proceedings of the Eighth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2008)), 20, 64-76 |
2008/06 |
|
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Hashimoto, K., Aoki-Kinoshita, K. F., Ueda, N., Kanehisa, M. and Mamitsuka, H. |
|
Hashimoto, K., Aoki-Kinoshita, K. F., Ueda, N., Kanehisa, M. and Mamitsuka, H. |
A New Efficient Probabilistic Model for Mining Labeled Ordered Trees Applied to Glycobiology. |
|
A New Efficient Probabilistic Model for Mining Labeled Ordered Trees Applied to Glycobiology. |
ACM Transactions on Knowledge Discovery from Data, 2, 1, Article No. 6 |
, 2, 1, Article No. 6 |
ACM Transactions on Knowledge Discovery from Data, 2, 1, Article No. 6 |
2008/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
Informatic Innovations in Glycobiology: Relevance to Drug Discovery. |
|
Informatic Innovations in Glycobiology: Relevance to Drug Discovery. |
Drug Discovery Today, 13, 3-4, 118-123 |
, 13, 3-4, 118-123 |
Drug Discovery Today, 13, 3-4, 118-123 |
2008/02 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Takigawa, I. and Mamitsuka, H. |
|
Takigawa, I. and Mamitsuka, H. |
Probabilistic Path Ranking Based on Adjacent Pairwise Coexpression for Metabolic Transcripts Analysis. |
|
Probabilistic Path Ranking Based on Adjacent Pairwise Coexpression for Metabolic Transcripts Analysis. |
Bioinformatics, 24, 2, 250-257 |
, 24, 2, 250-257 |
Bioinformatics, 24, 2, 250-257 |
2008/01 |
有 |
英語 |
|
公開 |
| Kadowaki, T., Wheelock, C. E., Adachi, T., Kudo, T., Okamoto, S., Tanaka, N., Tonomura, K., Tsujimoto, G., Mamitsuka, H., Goto, S. and Kanehisa, M. |
|
Kadowaki, T., Wheelock, C. E., Adachi, T., Kudo, T., Okamoto, S., Tanaka, N., Tonomura, K., Tsujimoto, G., Mamitsuka, H., Goto, S. and Kanehisa, M. |
Identification of Endocrine Disruptor Biodegradation by Integration of Structure-activity Relationship with Pathway Analysis. |
|
Identification of Endocrine Disruptor Biodegradation by Integration of Structure-activity Relationship with Pathway Analysis. |
Environmental Science and Technology, 41, 23, 7997-8003 |
, 41, 23, 7997-8003 |
Environmental Science and Technology, 41, 23, 7997-8003 |
2007/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mamitsuka, H. and Abe, N. |
|
Mamitsuka, H. and Abe, N. |
Active Ensemble Learning: Application to Data Mining and Bioinformatics. |
|
Active Ensemble Learning: Application to Data Mining and Bioinformatics. |
Systems and Computers in Japan, 38, 11, 100-108 |
, 38, 11, 100-108 |
Systems and Computers in Japan, 38, 11, 100-108 |
2007/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Shiga, M., Takigawa, I. and Mamitsuka, H. |
|
Shiga, M., Takigawa, I. and Mamitsuka, H. |
A Spectral Clustering Approach to Optimally Combining Numerical Vectors with a Modular Network. |
|
A Spectral Clustering Approach to Optimally Combining Numerical Vectors with a Modular Network. |
Proceedings of the Thirteenth ACM SIGKDD International Conference On Knowledge Discovery and Data Mining (KDD 2007), 647-656 |
, 647-656 |
Proceedings of the Thirteenth ACM SIGKDD International Conference On Knowledge Discovery and Data Mining (KDD 2007), 647-656 |
2007/08 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Yoneya, T. and Mamitsuka, H. |
|
Yoneya, T. and Mamitsuka, H. |
PURE: A PubMed Article Recommendation System Based on Content-based Filtering. |
|
PURE: A PubMed Article Recommendation System Based on Content-based Filtering. |
Genome Informatics (Proceedings of the Seventh Annual Workshop on Bioinformatics and Systems Biology (IBSB 2007)), 18, 267-276 |
, 18, 267-276 |
Genome Informatics (Proceedings of the Seventh Annual Workshop on Bioinformatics and Systems Biology (IBSB 2007)), 18, 267-276 |
2007/08 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Shiga, M., Takigawa, I. and Mamitsuka, H. |
|
Shiga, M., Takigawa, I. and Mamitsuka, H. |
Annotating Gene Function by Combining Expression Data with a Modular Gene Network. |
|
Annotating Gene Function by Combining Expression Data with a Modular Gene Network. |
Bioinformatics (Proceedings of the Fifteenth International Conference on Intelligent Systems for Molecular Biology (ISMB 2007)), 23, 13, i468-i478 |
, 23, 13, i468-i478 |
Bioinformatics (Proceedings of the Fifteenth International Conference on Intelligent Systems for Molecular Biology (ISMB 2007)), 23, 13, i468-i478 |
2007/07 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Zhu, S., Takigawa, I., Zhang, S. and Mamitsuka, H. |
|
Zhu, S., Takigawa, I., Zhang, S. and Mamitsuka, H. |
A Probabilistic Model for Clustering Text Documents with Multiple Fields. |
|
A Probabilistic Model for Clustering Text Documents with Multiple Fields. |
Lecture Notes in Computer Science (Proceedings of the Twenty-Ninth European Conference on Information Retrieval (ECIR 2007)), 4425, 331-342 |
, 4425, 331-342 |
Lecture Notes in Computer Science (Proceedings of the Twenty-Ninth European Conference on Information Retrieval (ECIR 2007)), 4425, 331-342 |
2007/04 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Yoneya, T. and Mamitsuka, H. |
|
Yoneya, T. and Mamitsuka, H. |
A Hidden Markov Model-based Approach for Identifying Timing Differences in Gene Expression under Different Experiment. |
|
A Hidden Markov Model-based Approach for Identifying Timing Differences in Gene Expression under Different Experiment. |
Bioinformatics, 23, 7, 842-849 |
, 23, 7, 842-849 |
Bioinformatics, 23, 7, 842-849 |
2007/04 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
Selecting Features in Microarray Classification Using ROC Curves. |
|
Selecting Features in Microarray Classification Using ROC Curves. |
Pattern Recognition, 39, 12, 2393-2404 |
, 39, 12, 2393-2404 |
Pattern Recognition, 39, 12, 2393-2404 |
2006/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Wan, R., Takigawa, I. and Mamitsuka, H. |
|
Wan, R., Takigawa, I. and Mamitsuka, H. |
Applying Gaussian Distribution-dependent Criteria to Decision Trees for High-Dimensional Microarray Data. |
|
Applying Gaussian Distribution-dependent Criteria to Decision Trees for High-Dimensional Microarray Data. |
Lecture Notes in Computer Science (Proceedings of 2006 VLDB Workshop on Data Mining in Bioinformatics), 4316, 40-49 |
, 4316, 40-49 |
Lecture Notes in Computer Science (Proceedings of 2006 VLDB Workshop on Data Mining in Bioinformatics), 4316, 40-49 |
2006/09 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Hashimoto, K., Aoki-Kinoshita, K. F., Ueda, N., Kanehisa, M. and Mamitsuka, H. |
|
Hashimoto, K., Aoki-Kinoshita, K. F., Ueda, N., Kanehisa, M. and Mamitsuka, H. |
A New Efficient Probabilistic Model for Mining Labeled Ordered Trees. |
|
A New Efficient Probabilistic Model for Mining Labeled Ordered Trees. |
Proceedings of the Twelfth ACM SIGKDD International Conference On Knowledge Discovery and Data Mining (KDD 2006), 177-186 |
, 177-186 |
Proceedings of the Twelfth ACM SIGKDD International Conference On Knowledge Discovery and Data Mining (KDD 2006), 177-186 |
2006/08 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Aoki-Kinoshita, K. F., Ueda, N., Mamitsuka, H. and Kanehisa, M. |
|
Aoki-Kinoshita, K. F., Ueda, N., Mamitsuka, H. and Kanehisa, M. |
ProfilePSTMM: Capturing Tree-structure Motifs in Carbohydrate Sugar Chains. |
|
ProfilePSTMM: Capturing Tree-structure Motifs in Carbohydrate Sugar Chains. |
Bioinformatics (Proceedings of the Fourteenth International Conference on Intelligent Systems for Molecular Biology (ISMB 2006)), 22, 14, e25-e34 |
, 22, 14, e25-e34 |
Bioinformatics (Proceedings of the Fourteenth International Conference on Intelligent Systems for Molecular Biology (ISMB 2006)), 22, 14, e25-e34 |
2006/07 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Zhu, S., Udaka, K., Sidney, J., Sette, A., Aoki-Kinoshita, K. F. and Mamitsuka, H. |
|
Zhu, S., Udaka, K., Sidney, J., Sette, A., Aoki-Kinoshita, K. F. and Mamitsuka, H. |
Improving MHC Binding Peptide Prediction by Incorporating Binding Data of Auxiliary MHC Molecules. |
|
Improving MHC Binding Peptide Prediction by Incorporating Binding Data of Auxiliary MHC Molecules. |
Bioinformatics, 22, 13, 1648-1655 |
, 22, 13, 1648-1655 |
Bioinformatics, 22, 13, 1648-1655 |
2006/07 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
Query-Learning-Based Iterative Feature-Subset Selection for Learning from High-Dimensional Data Sets. |
|
Query-Learning-Based Iterative Feature-Subset Selection for Learning from High-Dimensional Data Sets. |
Knowledge and Information Systems, 9, 1, 91-108 |
, 9, 1, 91-108 |
Knowledge and Information Systems, 9, 1, 91-108 |
2006/01 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Zhu, S., Okuno, Y., Tsujimoto, G. and Mamitsuka, H. |
|
Zhu, S., Okuno, Y., Tsujimoto, G. and Mamitsuka, H. |
Application of a New Probabilistic Model for Mining Implicit Associated Cancer Genes from OMIM and Medline. |
|
Application of a New Probabilistic Model for Mining Implicit Associated Cancer Genes from OMIM and Medline. |
Cancer Informatics, 2, 361-371 |
, 2, 361-371 |
Cancer Informatics, 2, 361-371 |
2006 |
有 |
英語 |
|
公開 |
| Cios, J. K., Mamitsuka, H., Nagashima, T. and Tadeusiewicz, R. |
|
Cios, J. K., Mamitsuka, H., Nagashima, T. and Tadeusiewicz, R. |
Computational Intelligence in Soving Bioinformatics Problems. |
|
Computational Intelligence in Soving Bioinformatics Problems. |
Artificial Intelligence in Medicine, 35, 1-2, 1-8 |
, 35, 1-2, 1-8 |
Artificial Intelligence in Medicine, 35, 1-2, 1-8 |
2005/09 |
|
英語 |
研究論文(学術雑誌) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
Finding the Biologically Optimum Alignment of Multiple Sequences. |
|
Finding the Biologically Optimum Alignment of Multiple Sequences. |
Artificial Intelligence in Medicine, 35, 1-2, 9-18 |
, 35, 1-2, 9-18 |
Artificial Intelligence in Medicine, 35, 1-2, 9-18 |
2005/09 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Zhu, S., Okuno, Y., Tsujimoto, G. and Mamitsuka, H. |
|
Zhu, S., Okuno, Y., Tsujimoto, G. and Mamitsuka, H. |
A Probabilistic Model for Mining Implicit "Chemical Compound - Gene" Relations from Literature. |
|
A Probabilistic Model for Mining Implicit "Chemical Compound - Gene" Relations from Literature. |
Bioinformatics (Proceedings of the Fourth European Conference on Computational Biology (ECCB/JBI2005)), 21, Suppl. 2, ii245-ii251 |
, 21, Suppl. 2, ii245-ii251 |
Bioinformatics (Proceedings of the Fourth European Conference on Computational Biology (ECCB/JBI2005)), 21, Suppl. 2, ii245-ii251 |
2005/09 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Yamada, T., Kawashima, S., Mamitsuka, H., Goto, S. and Kanehisa, M. |
|
Yamada, T., Kawashima, S., Mamitsuka, H., Goto, S. and Kanehisa, M. |
Comprehensive Analysis and Prediction of Synthetic Lethality Using Subcellular Locations. |
|
Comprehensive Analysis and Prediction of Synthetic Lethality Using Subcellular Locations. |
Genome Informatics (Proceedings of the Fourth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2005)), 16, 1, 150-158 |
, 16, 1, 150-158 |
Genome Informatics (Proceedings of the Fourth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2005)), 16, 1, 150-158 |
2005/08 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Ueda, N., Aoki-Kinoshita, K. F., Yamaguchi, A., Akutsu, T. and Mamitsuka, H. |
|
Ueda, N., Aoki-Kinoshita, K. F., Yamaguchi, A., Akutsu, T. and Mamitsuka, H. |
A Probabilistic Model for Mining Labeled Ordered Trees: Capturing Patterns in Carbohydrate Sugar Chains. |
|
A Probabilistic Model for Mining Labeled Ordered Trees: Capturing Patterns in Carbohydrate Sugar Chains. |
IEEE Transactions on Knowledge and Data Engineering, 17, 8, 1051-1064 |
, 17, 8, 1051-1064 |
IEEE Transactions on Knowledge and Data Engineering, 17, 8, 1051-1064 |
2005/08 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
Mining New Protein-Protein Interactions. |
|
Mining New Protein-Protein Interactions. |
IEEE Engineering in Medicine and Biology Magazine, 24, 3, 103-108 |
, 24, 3, 103-108 |
IEEE Engineering in Medicine and Biology Magazine, 24, 3, 103-108 |
2005/05 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
Essential Latent Knowledge for Protein-Protein Interactions: Analysis by Unsupervised Learning Approach. |
|
Essential Latent Knowledge for Protein-Protein Interactions: Analysis by Unsupervised Learning Approach. |
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2, 2, 119-130 |
, 2, 2, 119-130 |
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2, 2, 119-130 |
2005/04 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Aoki, K. F., Mamitsuka, H., Akutsu, T. and Kanehisa, M. |
|
Aoki, K. F., Mamitsuka, H., Akutsu, T. and Kanehisa, M. |
A Score Matrix to Reveal the Hidden Links in Glycans. |
|
A Score Matrix to Reveal the Hidden Links in Glycans. |
Bioinformatics, 21, 8, 1457-1463 |
, 21, 8, 1457-1463 |
Bioinformatics, 21, 8, 1457-1463 |
2005/04 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Wan, R., Mamitsuka, H. and Aoki, K. F. |
|
Wan, R., Mamitsuka, H. and Aoki, K. F. |
Cleaning Microarray Expression Data Using Markov Random Field Based-on Profile Similarity. |
|
Cleaning Microarray Expression Data Using Markov Random Field Based-on Profile Similarity. |
Proceedings of the Twentieth ACM Symposium on Applied Computing (SAC2005), 206-207 |
, 206-207 |
Proceedings of the Twentieth ACM Symposium on Applied Computing (SAC2005), 206-207 |
2005/03 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
Efficient Unsupervised Mining from Noisy Co-occurrence Data |
|
Efficient Unsupervised Mining from Noisy Co-occurrence Data |
New Mathematics and Natural Computation, 1, 1, 173-193 |
, 1, 1, 173-193 |
New Mathematics and Natural Computation, 1, 1, 173-193 |
2005/03 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Igarashi, Y., Aoki, K. F., Mamitsuka, H., Kuma, K. and Kanehisa, M. |
|
Igarashi, Y., Aoki, K. F., Mamitsuka, H., Kuma, K. and Kanehisa, M. |
The Evolutionary Repertoires of the Eukaryotic-type ABC Transporters in terms of the Phylogeny of ATP-binding Domains in Eukaryotes and Prokaryotes. |
|
The Evolutionary Repertoires of the Eukaryotic-type ABC Transporters in terms of the Phylogeny of ATP-binding Domains in Eukaryotes and Prokaryotes. |
Molecular Biology and Evolution, 21, 11, 2149-2160 |
, 21, 11, 2149-2160 |
Molecular Biology and Evolution, 21, 11, 2149-2160 |
2004/11 |
有 |
英語 |
|
公開 |
| Yamaguchi, A., Aoki, K. F. and Mamitsuka, H. |
|
Yamaguchi, A., Aoki, K. F. and Mamitsuka, H. |
Finding the Maximum Common Subgraph of a Partial k-Tree and a Graph with a Polynomially Bounded Number of Spanning Trees. |
|
Finding the Maximum Common Subgraph of a Partial k-Tree and a Graph with a Polynomially Bounded Number of Spanning Trees. |
Information Processing Letters, 92, 2, 57-63 |
, 92, 2, 57-63 |
Information Processing Letters, 92, 2, 57-63 |
2004/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mamitsuka, H. and Okuno, Y. |
|
Mamitsuka, H. and Okuno, Y. |
A Hierarchical Mixture of Markov Models for Finding Biologically Active Metabolic Paths using Gene Expression and Protein Classes |
|
A Hierarchical Mixture of Markov Models for Finding Biologically Active Metabolic Paths using Gene Expression and Protein Classes |
Proceedings of the IEEE Computational Systems Bioinformatics Conference (CSB 2004), 341-352 |
, 341-352 |
Proceedings of the IEEE Computational Systems Bioinformatics Conference (CSB 2004), 341-352 |
2004/08 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Aoki, K. F., Ueda, N., Yamaguchi, A., Kanehisa, M., Akutsu, T. and Mamitsuka, H. |
|
Aoki, K. F., Ueda, N., Yamaguchi, A., Kanehisa, M., Akutsu, T. and Mamitsuka, H. |
Application of a New Probabilistic Model for Recognizing Complex Patterns in Glycans. |
|
Application of a New Probabilistic Model for Recognizing Complex Patterns in Glycans. |
Bioinformatics (Proceedings of the Twelfth International Conference on Intelligent Systems for Molecular Biology (ISMB/ECCB2004)), 20, SUPPL. 1, i6-i14 |
, 20, SUPPL. 1, i6-i14 |
Bioinformatics (Proceedings of the Twelfth International Conference on Intelligent Systems for Molecular Biology (ISMB/ECCB2004)), 20, SUPPL. 1, i6-i14 |
2004/08 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Aoki, K. F., Yamaguchi, A., Ueda, H., Akutsu, T., Mamitsuka, H., Goto, S. and Kanehisa, M. |
|
Aoki, K. F., Yamaguchi, A., Ueda, H., Akutsu, T., Mamitsuka, H., Goto, S. and Kanehisa, M. |
KCaM (KEGG Carbohydrate Matcher): A Software Tool for Analyzing the Structures of Carbohydrate Sugar Chains. |
|
KCaM (KEGG Carbohydrate Matcher): A Software Tool for Analyzing the Structures of Carbohydrate Sugar Chains. |
Nucleic Acids Research, 32, Suppl. 2, W267-W272 |
, 32, Suppl. 2, W267-W272 |
Nucleic Acids Research, 32, Suppl. 2, W267-W272 |
2004/07 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Aoki, K. F., Ueda, N., Yamaguchi, A., Akutsu, T., Kanehisa, M. and Mamitsuka, H. |
|
Aoki, K. F., Ueda, N., Yamaguchi, A., Akutsu, T., Kanehisa, M. and Mamitsuka, H. |
Managing and Analyzing Carbohydrate Data. |
|
Managing and Analyzing Carbohydrate Data. |
ACM SIGMOD Record, 33, 2, 33-38 |
, 33, 2, 33-38 |
ACM SIGMOD Record, 33, 2, 33-38 |
2004/06 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Ueda, N., Aoki, K. F. and Mamitsuka, H. |
|
Ueda, N., Aoki, K. F. and Mamitsuka, H. |
A General Probabilistic Framework for Mining Labeled Ordered Trees. |
|
A General Probabilistic Framework for Mining Labeled Ordered Trees. |
Proceedings of the Fourth SIAM International Conference on Data Mining (SDM 2004), 357-368 |
, 357-368 |
Proceedings of the Fourth SIAM International Conference on Data Mining (SDM 2004), 357-368 |
2004/04 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
Finding the Maximum Common Subgraph of a Partial k-Tree and a Graph with a Polynomially Bounded Number of Spanning Trees. |
|
Finding the Maximum Common Subgraph of a Partial k-Tree and a Graph with a Polynomially Bounded Number of Spanning Trees. |
Lecture Notes in Computer Science (Proceedings of the Fourteenth International Symposium on Algorithm and Computation (ISAAC 2003)), 2906, 58-67 |
, 2906, 58-67 |
Lecture Notes in Computer Science (Proceedings of the Fourteenth International Symposium on Algorithm and Computation (ISAAC 2003)), 2906, 58-67 |
2003/12 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Aoki, K. F., Yamaguchi, A., Okuno, Y., Akutsu, T., Ueda, N., Kanehisa, M. and Mamitsuka, H. |
|
Aoki, K. F., Yamaguchi, A., Okuno, Y., Akutsu, T., Ueda, N., Kanehisa, M. and Mamitsuka, H. |
Efficient Tree Matching Methods for Accurate Carbohydrate Database Queries. |
|
Efficient Tree Matching Methods for Accurate Carbohydrate Database Queries. |
Genome Informatics (Proceedings of the Fourteenth International Conference on Genome Informatics), 14, 134-143 |
, 14, 134-143 |
Genome Informatics (Proceedings of the Fourteenth International Conference on Genome Informatics), 14, 134-143 |
2003/12 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Mamitsuka, H., Okuno, Y. and Yamaguchi, A. |
|
Mamitsuka, H., Okuno, Y. and Yamaguchi, A. |
Mining Biologically Active Patterns in Metabolic Pathways using Microarray Expression Profiles |
|
Mining Biologically Active Patterns in Metabolic Pathways using Microarray Expression Profiles |
ACM SIGKDD Explorations, 5, 2, 113-121 |
, 5, 2, 113-121 |
ACM SIGKDD Explorations, 5, 2, 113-121 |
2003/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
Efficient Mining from Heterogeneous Data Sets for Predicting Protein-Protein Interactions |
|
Efficient Mining from Heterogeneous Data Sets for Predicting Protein-Protein Interactions |
Proceedings of the Fourteenth International Workhop on Database and Expert Systems Applications, 32-36 |
, 32-36 |
Proceedings of the Fourteenth International Workhop on Database and Expert Systems Applications, 32-36 |
2003/09 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
Hierarchical Latent Knowledge Analysis for Co-occurrence Data. |
|
Hierarchical Latent Knowledge Analysis for Co-occurrence Data. |
Proceedings of the Twenties International Conference on Machine Learning (ICML 2003), 504-511 |
, 504-511 |
Proceedings of the Twenties International Conference on Machine Learning (ICML 2003), 504-511 |
2003/08 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
Selective Sampling with a Hierarchical Latent Variable Model. |
|
Selective Sampling with a Hierarchical Latent Variable Model. |
Lecture Notes in Computer Science (Proceedings of the Fifth International Symposium on Intelligent Data Analysis (IDA 2003)), 2810, 352-363 |
, 2810, 352-363 |
Lecture Notes in Computer Science (Proceedings of the Fifth International Symposium on Intelligent Data Analysis (IDA 2003)), 2810, 352-363 |
2003/08 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
Efficient Unsupervised Mining from Noisy Data Sets: Application to Clustering Co-occurrence Data. |
|
Efficient Unsupervised Mining from Noisy Data Sets: Application to Clustering Co-occurrence Data. |
Proceedings of the Third SIAM International Conference on Data Mining (SDM 2003), 239-243 |
, 239-243 |
Proceedings of the Third SIAM International Conference on Data Mining (SDM 2003), 239-243 |
2003/05 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
Empirical Evaluation of Ensemble Feature Subset Selection Methods for Learning from a High-Dimensional Database in Drug Design |
|
Empirical Evaluation of Ensemble Feature Subset Selection Methods for Learning from a High-Dimensional Database in Drug Design |
Proceedings of the Third IEEE International Symposium on Bioinformatics and Bioengineering (BIBE 2003), 253-257 |
, 253-257 |
Proceedings of the Third IEEE International Symposium on Bioinformatics and Bioengineering (BIBE 2003), 253-257 |
2003/03 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
Detecting Experimental Noise in Protein-Protein Interactions with Iterative Sampling and Model-based Clustering. |
|
Detecting Experimental Noise in Protein-Protein Interactions with Iterative Sampling and Model-based Clustering. |
Proceedings of the Third IEEE International Symposium on Bioinformatics and Bioengineering (BIBE 2003), 385-392 |
, 385-392 |
Proceedings of the Third IEEE International Symposium on Bioinformatics and Bioengineering (BIBE 2003), 385-392 |
2003/03 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Udaka, K., Mamitsuka, H., Nakaseko, H. and Abe, N. |
|
Udaka, K., Mamitsuka, H., Nakaseko, H. and Abe, N. |
Empirical Evaluation of a Dynamic Experiment Design Method for Prediction of MHC Class-I-Binding Peptides. |
|
Empirical Evaluation of a Dynamic Experiment Design Method for Prediction of MHC Class-I-Binding Peptides. |
Journal of Immunology, 169, 10, 5744-5753 |
, 169, 10, 5744-5753 |
Journal of Immunology, 169, 10, 5744-5753 |
2002/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
Iteratively Selecting Feature Subsets for Mining from High-Dimensional Databases. |
|
Iteratively Selecting Feature Subsets for Mining from High-Dimensional Databases. |
Lecture Notes in Computer Science (Proceedings of the Sixth European Conference on Principles and Practice of Knowledge Discovery in Databases (PKDD 2002)), 2431, 361-372 |
, 2431, 361-372 |
Lecture Notes in Computer Science (Proceedings of the Sixth European Conference on Principles and Practice of Knowledge Discovery in Databases (PKDD 2002)), 2431, 361-372 |
2002/08 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Udaka, K., Mamitsuka, H., Nakaseko, H. and Abe, N. |
|
Udaka, K., Mamitsuka, H., Nakaseko, H. and Abe, N. |
Prediction of MHC Class I Binding Peptides by a Query Learning Algorithm Based on Hidden Markov Models. |
|
Prediction of MHC Class I Binding Peptides by a Query Learning Algorithm Based on Hidden Markov Models. |
Journal of Biological Physics, 28, 2, 183-194 |
, 28, 2, 183-194 |
Journal of Biological Physics, 28, 2, 183-194 |
2002/06 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mamitsuka, H. and Abe, N. |
|
Mamitsuka, H. and Abe, N. |
Efficient Mining from Large Databases by Query Learning. |
|
Efficient Mining from Large Databases by Query Learning. |
Proceedings of the Seventeenth International Conference on Machine Learning (ICML 2000), 575-582 |
, 575-582 |
Proceedings of the Seventeenth International Conference on Machine Learning (ICML 2000), 575-582 |
2000/06 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Abe, N, Nakamura, A. and Mamitsuka, H. |
|
Abe, N, Nakamura, A. and Mamitsuka, H. |
Empirical Coomparison of Competing Query Learning Methods. |
|
Empirical Coomparison of Competing Query Learning Methods. |
Lecture Notes in Computer Science (Proceedings of the First International Conference on Discovery Science (DS 98)), 1532, 387-388 |
, 1532, 387-388 |
Lecture Notes in Computer Science (Proceedings of the First International Conference on Discovery Science (DS 98)), 1532, 387-388 |
1998/12 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| H. Mamitsuka |
|
H. Mamitsuka |
Predicting peptides that bind to MHC molecules using supervised learning of hidden Markov models |
|
Predicting peptides that bind to MHC molecules using supervised learning of hidden Markov models |
Proteins: Structure, Function and Genetics, 33, 4, 460-474 |
, 33, 4, 460-474 |
Proteins: Structure, Function and Genetics, 33, 4, 460-474 |
1998/12 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Abe, N. and Mamitsuka, H. |
|
Abe, N. and Mamitsuka, H. |
Query Learning Strategies Using Boosting and Bagging. |
|
Query Learning Strategies Using Boosting and Bagging. |
Proceedings of the Fifteenth International Conference on Machine Learning (ICML 98), 1-9 |
, 1-9 |
Proceedings of the Fifteenth International Conference on Machine Learning (ICML 98), 1-9 |
1998/07 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Mamitsuka, H. and Abe, N. |
|
Mamitsuka, H. and Abe, N. |
Predicting Protein Secondary Structure Using Stochastic Tree Grammars |
|
Predicting Protein Secondary Structure Using Stochastic Tree Grammars |
Machine Learning, 29, 2-3, 275-301 |
, 29, 2-3, 275-301 |
Machine Learning, 29, 2-3, 275-301 |
1997/11 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
Supervised Learning of Hidden Markov Models for Sequence Discrimination. |
|
Supervised Learning of Hidden Markov Models for Sequence Discrimination. |
Proceeds of the First International Conference on Computational Molecular Biology (RECOMB 97), 202-208 |
, 202-208 |
Proceeds of the First International Conference on Computational Molecular Biology (RECOMB 97), 202-208 |
1997/01 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
A Learning Method of Hidden Markov Models for Sequence Discrimination. |
|
A Learning Method of Hidden Markov Models for Sequence Discrimination. |
Journal of Computational Biology, 3, 3, 361-373 |
, 3, 3, 361-373 |
Journal of Computational Biology, 3, 3, 361-373 |
1996/10 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mamitsuka, H. and Yamanishi, K. |
|
Mamitsuka, H. and Yamanishi, K. |
α-Helix Region Prediction with Stochastic-rule Learning. |
|
α-Helix Region Prediction with Stochastic-rule Learning. |
Computer Applications in the Biosciences, 11, 4, 399-411 |
, 11, 4, 399-411 |
Computer Applications in the Biosciences, 11, 4, 399-411 |
1995/08 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mamitsuka, H. |
|
Mamitsuka, H. |
Representing Inter-Residue Dependencies in Protein Sequences with Probabilistic Networks. |
|
Representing Inter-Residue Dependencies in Protein Sequences with Probabilistic Networks. |
Computer Applications in the Biosciences, 11, 4, 413-422 |
, 11, 4, 413-422 |
Computer Applications in the Biosciences, 11, 4, 413-422 |
1995/08 |
有 |
英語 |
研究論文(学術雑誌) |
公開 |
| Mamitsuka, H. and Abe, N. |
|
Mamitsuka, H. and Abe, N. |
Predicting Location and Structure of Beta-Sheet Regions Using Stochastic Tree Grammars. |
|
Predicting Location and Structure of Beta-Sheet Regions Using Stochastic Tree Grammars. |
Proceedings of the Second International Conferenceon Intelligent Systems for Molecular Biology (ISMB 94), 276-284 |
, 276-284 |
Proceedings of the Second International Conferenceon Intelligent Systems for Molecular Biology (ISMB 94), 276-284 |
1994/08 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Abe, N. and Mamitsuka, H. |
|
Abe, N. and Mamitsuka, H. |
A New Method for Predicting Protein Secondary Structures Based on Stochastic Tree Grammars. |
|
A New Method for Predicting Protein Secondary Structures Based on Stochastic Tree Grammars. |
Proceedings of the Eleventh International Conference on Machine Learning (ML 94), 3-11 |
, 3-11 |
Proceedings of the Eleventh International Conference on Machine Learning (ML 94), 3-11 |
1994/07 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Mamitsuka, H. and Yamanishi, K. |
|
Mamitsuka, H. and Yamanishi, K. |
Protein Alpha-Helix Region Prediction Based on Stochastic Rule Learning. |
|
Protein Alpha-Helix Region Prediction Based on Stochastic Rule Learning. |
Proceedings of the Twenty-sixth Annual Hawaii International Conference on System Sciences (HICSS 26), 1, 659-668 |
, 1, 659-668 |
Proceedings of the Twenty-sixth Annual Hawaii International Conference on System Sciences (HICSS 26), 1, 659-668 |
1993/01 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
| Mamitsuka, H. and Yamanishi, K. |
|
Mamitsuka, H. and Yamanishi, K. |
Protein Secondary Structure Prediction Based on Stochastic Rule Learning. |
|
Protein Secondary Structure Prediction Based on Stochastic Rule Learning. |
Lecture Notes in Computer Science (Proceedings of the Third Annual Workshop on Algorithmic Learning Theory (ALT 92)), 743, 240-251 |
, 743, 240-251 |
Lecture Notes in Computer Science (Proceedings of the Third Annual Workshop on Algorithmic Learning Theory (ALT 92)), 743, 240-251 |
1992/10 |
有 |
英語 |
研究論文(国際会議プロシーディングス) |
公開 |
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