馬見塚 拓

最終更新日時: 2021/10/14 05:50:42

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氏名(漢字／フリガナ／アルファベット表記)
馬見塚 拓／マミツカ ヒロシ／Mamitsuka, Hiroshi
所属部署・職名(部局／所属／講座等／職名)
化学研究所／化学研究所附属バイオインフォマティクスセンター／　／教授
協力講座
部局 所属 講座等 職名
薬学研究科 医薬創成情報科学専攻 医薬創成情報科学講座 教授
学内兼務
部局 所属 講座等 職名
学際融合教育研究推進センター 統合複雑系科学国際研究ユニット
連絡先住所
種別 住所(日本語) 住所(英語)
職場
連絡先電話番号
種別 番号
職場
取得学位
学位名(日本語) 学位名(英語) 大学(日本語) 大学(英語) 取得区分
修士（工学） Master of Engineering 東京大学 University of Tokyo
博士（理学） PhD in Information Sciences 東京大学 University of Tokyo
個人ホームページ
URL
http://www.bic.kyoto-u.ac.jp/pathway/mami
ORCID ID
https://orcid.org/0000-0002-6607-5617
researchmap URL
https://researchmap.jp/7000008516
研究テーマ
(日本語)
科学、特に生命科学発展の高速化・高度化のための機械学習研究
(英語)
Machine learning research for accelerating / advancing science and engineering, particularly life sciences
研究概要
(英語)
My machine learning research has two aspects, being featured by "data": 1) graphs and networks: a typical and emerging graph in our present society is social networks in our life, and also a variety of graphs in modern sciences, for instance, gene regulatory networks, medical life pathways and chemical (or molecular) structures. I have developed machine learning methods to obtain knowledge or information from this type of graphs. 2) data integration: in general, any entity can be found in not only one but multiple data sources. For example, you are connected by social networks, and your purchase record in an e-commerce site would be kept in the e-commerce company. This is also the case with your online surfing record, such as your seen movies at youtube. Then your demographic data, such as age, sex, the region in which you were born and currently you are living, can be saved in many places on-line. So we can use your data from many sources. The question is how we can integrate this type of different and diverse data to build a good machine learner to predict your unforeseen future. To answer this question, I have done research on data-integrative machine learning.
研究分野（キーワード）
キーワード(日本語) キーワード(英語)
機械学習 machine learning
バイオインフォマティクス (生命情報科学) bioinformatics
データ駆動型科学 data-driven science
論文
著者 著者(日本語) 著者(英語) タイトル タイトル(日本語) タイトル(英語) 書誌情報等 書誌情報等(日本語) 書誌情報等(英語) 出版年月 査読の有無 記述言語 掲載種別 公開
Betül Güvenç Paltun, Samuel Kaski, Hiroshi Mamitsuka Betül Güvenç Paltun, Samuel Kaski, Hiroshi Mamitsuka Betül Güvenç Paltun, Samuel Kaski, Hiroshi Mamitsuka Machine learning approaches for drug combination therapies Machine learning approaches for drug combination therapies Machine learning approaches for drug combination therapies Briefings in Bioinformatics Briefings in Bioinformatics Briefings in Bioinformatics 2021/08/06 有 英語 研究論文(学術雑誌) 公開
Ronghui You, Shuwei Yao, Hiroshi Mamitsuka, Shanfeng Zhu Ronghui You, Shuwei Yao, Hiroshi Mamitsuka, Shanfeng Zhu Ronghui You, Shuwei Yao, Hiroshi Mamitsuka, Shanfeng Zhu DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction Bioinformatics, 37, Supplement_1, i262-i271 Bioinformatics, 37, Supplement_1, i262-i271 Bioinformatics, 37, Supplement_1, i262-i271 2021/08/04 有 英語 研究論文(学術雑誌) 公開
Dai Hai Nguyen, Canh Hao Nguyen, Hiroshi Mamitsuka Dai Hai Nguyen, Canh Hao Nguyen, Hiroshi Mamitsuka Dai Hai Nguyen, Canh Hao Nguyen, Hiroshi Mamitsuka Learning subtree pattern importance for Weisfeiler-Lehman based graph kernels Learning subtree pattern importance for Weisfeiler-Lehman based graph kernels Learning subtree pattern importance for Weisfeiler-Lehman based graph kernels Machine Learning Machine Learning Machine Learning 2021/06/13 有 英語 研究論文(学術雑誌) 公開
Ronghui You, Yuxuan Liu, Hiroshi Mamitsuka, Shanfeng Zhu Ronghui You, Yuxuan Liu, Hiroshi Mamitsuka, Shanfeng Zhu Ronghui You, Yuxuan Liu, Hiroshi Mamitsuka, Shanfeng Zhu BERTMeSH: deep contextual representation learning for large-scale high-performance MeSH indexing with full text BERTMeSH: deep contextual representation learning for large-scale high-performance MeSH indexing with full text BERTMeSH: deep contextual representation learning for large-scale high-performance MeSH indexing with full text Bioinformatics, 37, 5, 684-692 Bioinformatics, 37, 5, 684-692 Bioinformatics, 37, 5, 684-692 2021/05/05 有 英語 研究論文(学術雑誌) 公開
Lizhi Liu, Hiroshi Mamitsuka, Shanfeng Zhu Lizhi Liu, Hiroshi Mamitsuka, Shanfeng Zhu Lizhi Liu, Hiroshi Mamitsuka, Shanfeng Zhu HPOFiller: identifying missing protein–phenotype associations by graph convolutional network HPOFiller: identifying missing protein–phenotype associations by graph convolutional network HPOFiller: identifying missing protein–phenotype associations by graph convolutional network Bioinformatics Bioinformatics Bioinformatics 2021/04/06 有 英語 研究論文(学術雑誌) 公開
Kishan Wimalawarne, Hiroshi Mamitsuka Kishan Wimalawarne, Hiroshi Mamitsuka Kishan Wimalawarne, Hiroshi Mamitsuka Reshaped tensor nuclear norms for higher order tensor completion Reshaped tensor nuclear norms for higher order tensor completion Reshaped tensor nuclear norms for higher order tensor completion Machine Learning, 110, 3, 507-531 Machine Learning, 110, 3, 507-531 Machine Learning, 110, 3, 507-531 2021/03 有 英語 研究論文(学術雑誌) 公開
Menglan Cai, Canh Hao Nguyen, Hiroshi Mamitsuka, Limin Li Menglan Cai, Canh Hao Nguyen, Hiroshi Mamitsuka, Limin Li Menglan Cai, Canh Hao Nguyen, Hiroshi Mamitsuka, Limin Li XGSEA: CROSS-species gene set enrichment analysis via domain adaptation XGSEA: CROSS-species gene set enrichment analysis via domain adaptation XGSEA: CROSS-species gene set enrichment analysis via domain adaptation Briefings in Bioinformatics Briefings in Bioinformatics Briefings in Bioinformatics 2021/01/30 有 英語 研究論文(学術雑誌) 公開
Betül Güvenç Paltun, Hiroshi Mamitsuka, Samuel Kaski Betül Güvenç Paltun, Hiroshi Mamitsuka, Samuel Kaski Betül Güvenç Paltun, Hiroshi Mamitsuka, Samuel Kaski Improving drug response prediction by integrating multiple data sources: matrix factorization, kernel and network-based approaches Improving drug response prediction by integrating multiple data sources: matrix factorization, kernel and network-based approaches Improving drug response prediction by integrating multiple data sources: matrix factorization, kernel and network-based approaches Briefings in Bioinformatics, 22, 1, 346-359 Briefings in Bioinformatics, 22, 1, 346-359 Briefings in Bioinformatics, 22, 1, 346-359 2021/01/18 有 英語 研究論文(学術雑誌) 公開
Duc Anh Nguyen, Canh Hao Nguyen, Hiroshi Mamitsuka Duc Anh Nguyen, Canh Hao Nguyen, Hiroshi Mamitsuka Duc Anh Nguyen, Canh Hao Nguyen, Hiroshi Mamitsuka A survey on adverse drug reaction studies: data, tasks and machine learning methods A survey on adverse drug reaction studies: data, tasks and machine learning methods A survey on adverse drug reaction studies: data, tasks and machine learning methods Briefings in Bioinformatics, 22, 1, 164-177 Briefings in Bioinformatics, 22, 1, 164-177 Briefings in Bioinformatics, 22, 1, 164-177 2021/01/18 有 英語 研究論文(学術雑誌) 公開
Betul Guvencpaltun, Samuel Kaski, Hiroshi Mamitsuka Betul Guvencpaltun, Samuel Kaski, Hiroshi Mamitsuka Betul Guvencpaltun, Samuel Kaski, Hiroshi Mamitsuka DIVERSE: Bayesian Data IntegratiVE learning for precise drug ResponSE prediction DIVERSE: Bayesian Data IntegratiVE learning for precise drug ResponSE prediction DIVERSE: Bayesian Data IntegratiVE learning for precise drug ResponSE prediction IEEE/ACM Transactions on Computational Biology and Bioinformatics, 1-1 IEEE/ACM Transactions on Computational Biology and Bioinformatics, 1-1 IEEE/ACM Transactions on Computational Biology and Bioinformatics, 1-1 2021 有 英語 研究論文(学術雑誌) 公開
Hiroto Kaneko, Romain Blanc-Mathieu, Hisashi Endo, Samuel Chaffron, Tom O. Delmont, Morgan Gaia, Nicolas Henry, Rodrigo Hernández-Velázquez, Canh Hao Nguyen, Hiroshi Mamitsuka, Patrick Forterre, Olivier Jaillon, Colomban de Vargas, Matthew B. Sullivan, Curtis A. Suttle, Lionel Guidi, Hiroyuki Ogata Hiroto Kaneko, Romain Blanc-Mathieu, Hisashi Endo, Samuel Chaffron, Tom O. Delmont, Morgan Gaia, Nicolas Henry, Rodrigo Hernández-Velázquez, Canh Hao Nguyen, Hiroshi Mamitsuka, Patrick Forterre, Olivier Jaillon, Colomban de Vargas, Matthew B. Sullivan, Curtis A. Suttle, Lionel Guidi, Hiroyuki Ogata Hiroto Kaneko, Romain Blanc-Mathieu, Hisashi Endo, Samuel Chaffron, Tom O. Delmont, Morgan Gaia, Nicolas Henry, Rodrigo Hernández-Velázquez, Canh Hao Nguyen, Hiroshi Mamitsuka, Patrick Forterre, Olivier Jaillon, Colomban de Vargas, Matthew B. Sullivan, Curtis A. Suttle, Lionel Guidi, Hiroyuki Ogata Eukaryotic virus composition can predict the efficiency of carbon export in the global ocean Eukaryotic virus composition can predict the efficiency of carbon export in the global ocean Eukaryotic virus composition can predict the efficiency of carbon export in the global ocean iScience, 24, 1, 102002-102002 iScience, 24, 1, 102002-102002 iScience, 24, 1, 102002-102002 2021/01 有 英語 研究論文(学術雑誌) 公開
Lizhi Liu, Xiaodi Huang, Hiroshi Mamitsuka, Shanfeng Zhu Lizhi Liu, Xiaodi Huang, Hiroshi Mamitsuka, Shanfeng Zhu Lizhi Liu, Xiaodi Huang, Hiroshi Mamitsuka, Shanfeng Zhu HPOLabeler: improving prediction of human protein–phenotype associations by learning to rank HPOLabeler: improving prediction of human protein–phenotype associations by learning to rank HPOLabeler: improving prediction of human protein–phenotype associations by learning to rank Bioinformatics, 36, 14, 4180-4188 Bioinformatics, 36, 14, 4180-4188 Bioinformatics, 36, 14, 4180-4188 2020/07/30 有 英語 研究論文(学術雑誌) 公開
Jonathan Strahl, Jaakko Peltonen, Hirsohi Mamitsuka, Samuel Kaski Jonathan Strahl, Jaakko Peltonen, Hirsohi Mamitsuka, Samuel Kaski Jonathan Strahl, Jaakko Peltonen, Hirsohi Mamitsuka, Samuel Kaski Scalable Probabilistic Matrix Factorization with Graph-Based Priors Scalable Probabilistic Matrix Factorization with Graph-Based Priors Scalable Probabilistic Matrix Factorization with Graph-Based Priors Proceedings of the AAAI Conference on Artificial Intelligence, 34, 04, 5851-5858 Proceedings of the AAAI Conference on Artificial Intelligence, 34, 04, 5851-5858 Proceedings of the AAAI Conference on Artificial Intelligence, 34, 04, 5851-5858 2020/04/03 有 研究論文(学術雑誌) 公開
Atsuyoshi Nakamura, Ichigaku Takigawa, Hiroshi Mamitsuka Atsuyoshi Nakamura, Ichigaku Takigawa, Hiroshi Mamitsuka Atsuyoshi Nakamura, Ichigaku Takigawa, Hiroshi Mamitsuka Efficiently Enumerating Substrings with Statistically Significant Frequencies of Locally Optimal Occurrences in Gigantic String Efficiently Enumerating Substrings with Statistically Significant Frequencies of Locally Optimal Occurrences in Gigantic String Efficiently Enumerating Substrings with Statistically Significant Frequencies of Locally Optimal Occurrences in Gigantic String Proceedings of the AAAI Conference on Artificial Intelligence (AAAI 2020), 34, 04, 5240-5247 Proceedings of the AAAI Conference on Artificial Intelligence (AAAI 2020), 34, 04, 5240-5247 Proceedings of the AAAI Conference on Artificial Intelligence (AAAI 2020), 34, 04, 5240-5247 2020/04/03 有 研究論文(学術雑誌) 公開
Suyang Dai, Ronghui You, Zhiyong Lu, Xiaodi Huang, Hiroshi Mamitsuka, Shanfeng Zhu Suyang Dai, Ronghui You, Zhiyong Lu, Xiaodi Huang, Hiroshi Mamitsuka, Shanfeng Zhu Suyang Dai, Ronghui You, Zhiyong Lu, Xiaodi Huang, Hiroshi Mamitsuka, Shanfeng Zhu FullMeSH: Improving large-scale MeSH indexing with full text FullMeSH: Improving large-scale MeSH indexing with full text FullMeSH: Improving large-scale MeSH indexing with full text Bioinformatics, 36, 5, 1533-1541 Bioinformatics, 36, 5, 1533-1541 Bioinformatics, 36, 5, 1533-1541 2020/03/01 有 研究論文(学術雑誌) 公開
Kishan Wimalawarne, Makoto Yamada, Hiroshi Mamitsuka Kishan Wimalawarne, Makoto Yamada, Hiroshi Mamitsuka Kishan Wimalawarne, Makoto Yamada, Hiroshi Mamitsuka Scaled coupled norms and coupled higher-order tensor completion Scaled coupled norms and coupled higher-order tensor completion Scaled coupled norms and coupled higher-order tensor completion Neural Computation, 32, 2, 447-484 Neural Computation, 32, 2, 447-484 Neural Computation, 32, 2, 447-484 2020/02/01 有 公開
Hao Canh Nguyen, Hiroshi Mamitsuka Hao Canh Nguyen, Hiroshi Mamitsuka Hao Canh Nguyen, Hiroshi Mamitsuka Learning on Hypergraphs with Sparsity Learning on Hypergraphs with Sparsity Learning on Hypergraphs with Sparsity IEEE Transactions on Pattern Analysis and Machine Intelligence, 1-1 IEEE Transactions on Pattern Analysis and Machine Intelligence, 1-1 IEEE Transactions on Pattern Analysis and Machine Intelligence, 1-1 2020 有 英語 研究論文(学術雑誌) 公開
Junning Gao, Lizhi Liu, Shuwei Yao, Xiaodi Huang, Hiroshi Mamitsuka, Shanfeng Zhu Junning Gao, Lizhi Liu, Shuwei Yao, Xiaodi Huang, Hiroshi Mamitsuka, Shanfeng Zhu Junning Gao, Lizhi Liu, Shuwei Yao, Xiaodi Huang, Hiroshi Mamitsuka, Shanfeng Zhu HPOAnnotator: improving large-scale prediction of HPO annotations by low-rank approximation with HPO semantic similarities and multiple PPI networks HPOAnnotator: improving large-scale prediction of HPO annotations by low-rank approximation with HPO semantic similarities and multiple PPI networks HPOAnnotator: improving large-scale prediction of HPO annotations by low-rank approximation with HPO semantic similarities and multiple PPI networks BMC Medical Genomics, 12 BMC Medical Genomics, 12 BMC Medical Genomics, 12 2019/12/23 有 研究論文(学術雑誌) 公開
Ronghui You, Zihan Zhang, Ziye Wang, Suyang Dai, Hiroshi Mamitsuka, Shanfeng Zhu Ronghui You, Zihan Zhang, Ziye Wang, Suyang Dai, Hiroshi Mamitsuka, Shanfeng Zhu Ronghui You, Zihan Zhang, Ziye Wang, Suyang Dai, Hiroshi Mamitsuka, Shanfeng Zhu AttentionXML: Label Tree-based Attention-Aware Deep Model for High-Performance Extreme Multi-Label Text Classification. AttentionXML: Label Tree-based Attention-Aware Deep Model for High-Performance Extreme Multi-Label Text Classification. AttentionXML: Label Tree-based Attention-Aware Deep Model for High-Performance Extreme Multi-Label Text Classification. Proceedings of the 33rd Annual Conference on Neural Information Processing Systems (NeurIPS 2019), 5812-5822 Proceedings of the 33rd Annual Conference on Neural Information Processing Systems (NeurIPS 2019), 5812-5822 Proceedings of the 33rd Annual Conference on Neural Information Processing Systems (NeurIPS 2019), 5812-5822 2019/12 有 研究論文(国際会議プロシーディングス) 公開
Michael P. Menden, Dennis Wang, Mike J. Mason, Bence Szalai, Krishna C. Bulusu, Yuanfang Guan, Thomas Yu, Jaewoo Kang, Minji Jeon, Russ Wolfinger, Tin Nguyen, Mikhail Zaslavskiy, Jordi Abante, Barbara Schmitz Abecassis, Nanne Aben, Delasa Aghamirzaie, Tero Aittokallio, Farida S. Akhtari, Bissan Al-lazikani, Tanvir Alam, Amin Allam, Chad Allen, Mariana Pelicano de Almeida, Doaa Altarawy, Vinicius Alves, Alicia Amadoz, Benedict Anchang, Albert A. Antolin, Jeremy R. Ash, Victoria Romeo Aznar, Wail Ba-alawi, Moeen Bagheri, Vladimir Bajic, Gordon Ball, Pedro J. Ballester, Delora Baptista, Christopher Bare, Mathilde Bateson, Andreas Bender, Denis Bertrand, Bhagya Wijayawardena, Keith A. Boroevich, Evert Bosdriesz, Salim Bougouffa, Gergana Bounova, Thomas Brouwer, Barbara Bryant, Manuel Calaza, Alberto Calderone, Stefano Calza, Stephen Capuzzi, Jose Carbonell-Caballero, Daniel Carlin, Hannah Carter, Luisa Castagnoli, Remzi Celebi, Gianni Cesareni, Hyeokyoon Chang, Guocai Chen, Haoran Chen, Huiyuan Chen, Lijun Cheng, Ariel Chernomoretz, Davide Chicco, Kwang Hyun Cho, Sunghwan Cho, Daeseon Choi, Jaejoon Choi, Kwanghun Choi, Minsoo Choi, Martine De Cock, Elizabeth Coker, Isidro Cortes-Ciriano, Miklós Cserzö, Cankut Cubuk, Christina Curtis, Dries Van Daele, Cuong C. Dang, Tjeerd Dijkstra, Joaquin Dopazo, Sorin Draghici, Anastasios Drosou, Michel Dumontier, Friederike Ehrhart, Fatma Elzahraa Eid, Mahmoud ElHefnawi, Haitham Elmarakeby, Bo van Engelen, Hatice Billur Engin, Iwan de Esch, Chris Evelo, Andre O. Falcao, Sherif Farag, Carlos Fernandez-Lozano, Kathleen Fisch, Asmund Flobak, Chiara Fornari, Amir B.K. Foroushani, Donatien Chedom Fotso, Denis Fourches Michael P. Menden, Dennis Wang, Mike J. Mason, Bence Szalai, Krishna C. Bulusu, Yuanfang Guan, Thomas Yu, Jaewoo Kang, Minji Jeon, Russ Wolfinger, Tin Nguyen, Mikhail Zaslavskiy, Jordi Abante, Barbara Schmitz Abecassis, Nanne Aben, Delasa Aghamirzaie, Tero Aittokallio, Farida S. Akhtari, Bissan Al-lazikani, Tanvir Alam, Amin Allam, Chad Allen, Mariana Pelicano de Almeida, Doaa Altarawy, Vinicius Alves, Alicia Amadoz, Benedict Anchang, Albert A. Antolin, Jeremy R. Ash, Victoria Romeo Aznar, Wail Ba-alawi, Moeen Bagheri, Vladimir Bajic, Gordon Ball, Pedro J. Ballester, Delora Baptista, Christopher Bare, Mathilde Bateson, Andreas Bender, Denis Bertrand, Bhagya Wijayawardena, Keith A. Boroevich, Evert Bosdriesz, Salim Bougouffa, Gergana Bounova, Thomas Brouwer, Barbara Bryant, Manuel Calaza, Alberto Calderone, Stefano Calza, Stephen Capuzzi, Jose Carbonell-Caballero, Daniel Carlin, Hannah Carter, Luisa Castagnoli, Remzi Celebi, Gianni Cesareni, Hyeokyoon Chang, Guocai Chen, Haoran Chen, Huiyuan Chen, Lijun Cheng, Ariel Chernomoretz, Davide Chicco, Kwang Hyun Cho, Sunghwan Cho, Daeseon Choi, Jaejoon Choi, Kwanghun Choi, Minsoo Choi, Martine De Cock, Elizabeth Coker, Isidro Cortes-Ciriano, Miklós Cserzö, Cankut Cubuk, Christina Curtis, Dries Van Daele, Cuong C. Dang, Tjeerd Dijkstra, Joaquin Dopazo, Sorin Draghici, Anastasios Drosou, Michel Dumontier, Friederike Ehrhart, Fatma Elzahraa Eid, Mahmoud ElHefnawi, Haitham Elmarakeby, Bo van Engelen, Hatice Billur Engin, Iwan de Esch, Chris Evelo, Andre O. Falcao, Sherif Farag, Carlos Fernandez-Lozano, Kathleen Fisch, Asmund Flobak, Chiara Fornari, Amir B.K. Foroushani, Donatien Chedom Fotso, Denis Fourches Michael P. Menden, Dennis Wang, Mike J. Mason, Bence Szalai, Krishna C. Bulusu, Yuanfang Guan, Thomas Yu, Jaewoo Kang, Minji Jeon, Russ Wolfinger, Tin Nguyen, Mikhail Zaslavskiy, Jordi Abante, Barbara Schmitz Abecassis, Nanne Aben, Delasa Aghamirzaie, Tero Aittokallio, Farida S. Akhtari, Bissan Al-lazikani, Tanvir Alam, Amin Allam, Chad Allen, Mariana Pelicano de Almeida, Doaa Altarawy, Vinicius Alves, Alicia Amadoz, Benedict Anchang, Albert A. Antolin, Jeremy R. Ash, Victoria Romeo Aznar, Wail Ba-alawi, Moeen Bagheri, Vladimir Bajic, Gordon Ball, Pedro J. Ballester, Delora Baptista, Christopher Bare, Mathilde Bateson, Andreas Bender, Denis Bertrand, Bhagya Wijayawardena, Keith A. Boroevich, Evert Bosdriesz, Salim Bougouffa, Gergana Bounova, Thomas Brouwer, Barbara Bryant, Manuel Calaza, Alberto Calderone, Stefano Calza, Stephen Capuzzi, Jose Carbonell-Caballero, Daniel Carlin, Hannah Carter, Luisa Castagnoli, Remzi Celebi, Gianni Cesareni, Hyeokyoon Chang, Guocai Chen, Haoran Chen, Huiyuan Chen, Lijun Cheng, Ariel Chernomoretz, Davide Chicco, Kwang Hyun Cho, Sunghwan Cho, Daeseon Choi, Jaejoon Choi, Kwanghun Choi, Minsoo Choi, Martine De Cock, Elizabeth Coker, Isidro Cortes-Ciriano, Miklós Cserzö, Cankut Cubuk, Christina Curtis, Dries Van Daele, Cuong C. Dang, Tjeerd Dijkstra, Joaquin Dopazo, Sorin Draghici, Anastasios Drosou, Michel Dumontier, Friederike Ehrhart, Fatma Elzahraa Eid, Mahmoud ElHefnawi, Haitham Elmarakeby, Bo van Engelen, Hatice Billur Engin, Iwan de Esch, Chris Evelo, Andre O. Falcao, Sherif Farag, Carlos Fernandez-Lozano, Kathleen Fisch, Asmund Flobak, Chiara Fornari, Amir B.K. Foroushani, Donatien Chedom Fotso, Denis Fourches Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen Nature Communications, 10, 1 Nature Communications, 10, 1 Nature Communications, 10, 1 2019/12/01 有 研究論文(学術雑誌) 公開
Gillberg Jussi, Marttinen Pekka, Mamitsuka Hiroshi, Kaski Samuel Gillberg Jussi, Marttinen Pekka, Mamitsuka Hiroshi, Kaski Samuel Gillberg Jussi, Marttinen Pekka, Mamitsuka Hiroshi, Kaski Samuel Modelling G×E with historical weather information improves genomic prediction in new environments Modelling G×E with historical weather information improves genomic prediction in new environments Modelling G×E with historical weather information improves genomic prediction in new environments Bioinformatics, 35, 20, 4045-4052 Bioinformatics, 35, 20, 4045-4052 Bioinformatics, 35, 20, 4045-4052 2019/10 有 英語 研究論文(学術雑誌) 公開
Lu Sun, Canh Hao Nguyen, Hiroshi Mamitsuka Lu Sun, Canh Hao Nguyen, Hiroshi Mamitsuka Lu Sun, Canh Hao Nguyen, Hiroshi Mamitsuka Multiplicative Sparse Feature Decomposition for Efficient Multi-View Multi-Task Learning Multiplicative Sparse Feature Decomposition for Efficient Multi-View Multi-Task Learning Multiplicative Sparse Feature Decomposition for Efficient Multi-View Multi-Task Learning Proceedings of the Twenty-Eighth International Joint Conference on Artificial Intelligence, 3506-3512 Proceedings of the Twenty-Eighth International Joint Conference on Artificial Intelligence, 3506-3512 Proceedings of the Twenty-Eighth International Joint Conference on Artificial Intelligence, 3506-3512 2019/08 有 研究論文(国際会議プロシーディングス) 公開
Sun Lu, Nguyen Canh Hao, Mamitsuka Hiroshi Sun Lu, Nguyen Canh Hao, Mamitsuka Hiroshi Sun Lu, Nguyen Canh Hao, Mamitsuka Hiroshi Fast and Robust Multi-View Multi-Task Learning via Group Sparsity Fast and Robust Multi-View Multi-Task Learning via Group Sparsity Fast and Robust Multi-View Multi-Task Learning via Group Sparsity Proceedings of the Twenty-Eighth International Joint Conference on Artificial Intelligence (IJCAI 2019), 3499-3505 Proceedings of the Twenty-Eighth International Joint Conference on Artificial Intelligence (IJCAI 2019), 3499-3505 Proceedings of the Twenty-Eighth International Joint Conference on Artificial Intelligence (IJCAI 2019), 3499-3505 2019/08 有 英語 研究論文(国際会議プロシーディングス) 公開
Eid Abdelrahman Munther, Mamitsuka Hiroshi, Wicker Nicolas Eid Abdelrahman Munther, Mamitsuka Hiroshi, Wicker Nicolas Eid Abdelrahman Munther, Mamitsuka Hiroshi, Wicker Nicolas A Metropolis-Hastings Sampling of Subtrees in Graphs A Metropolis-Hastings Sampling of Subtrees in Graphs A Metropolis-Hastings Sampling of Subtrees in Graphs Austrian Journal of Statistics, 48, 5, 17-33 Austrian Journal of Statistics, 48, 5, 17-33 Austrian Journal of Statistics, 48, 5, 17-33 2019/07 有 英語 研究論文(学術雑誌) 公開
Wicker Nicolas, Nguyen Canh Hao, Mamitsuka Hiroshi Wicker Nicolas, Nguyen Canh Hao, Mamitsuka Hiroshi Wicker Nicolas, Nguyen Canh Hao, Mamitsuka Hiroshi A p-Laplacian Random Walk: Application to Video Games A p-Laplacian Random Walk: Application to Video Games A p-Laplacian Random Walk: Application to Video Games Austrian Journal of Statistics, 48, 5, 11-16 Austrian Journal of Statistics, 48, 5, 11-16 Austrian Journal of Statistics, 48, 5, 11-16 2019/07 有 英語 研究論文(学術雑誌) 公開
You Ronghui, Yao Shuwei, Xiong Yi, Huang Xiaodi, Sun Fengzhu, Mamitsuka Hiroshi, Zhu Shanfeng You Ronghui, Yao Shuwei, Xiong Yi, Huang Xiaodi, Sun Fengzhu, Mamitsuka Hiroshi, Zhu Shanfeng You Ronghui, Yao Shuwei, Xiong Yi, Huang Xiaodi, Sun Fengzhu, Mamitsuka Hiroshi, Zhu Shanfeng NetGO: improving large-scale protein function prediction with massive network information NetGO: improving large-scale protein function prediction with massive network information NetGO: improving large-scale protein function prediction with massive network information Nucleic Acids Research, 47, W1, W379-W387 Nucleic Acids Research, 47, W1, W379-W387 Nucleic Acids Research, 47, W1, W379-W387 2019/07 有 英語 研究論文(学術雑誌) 公開
Nguyen Dai Hai, Nguyen Canh Hao, Mamitsuka Hiroshi Nguyen Dai Hai, Nguyen Canh Hao, Mamitsuka Hiroshi Nguyen Dai Hai, Nguyen Canh Hao, Mamitsuka Hiroshi ADAPTIVE: leArning DAta-dePendenT, concIse molecular VEctors for fast, accurate metabolite identification from tandem mass spectra ADAPTIVE: leArning DAta-dePendenT, concIse molecular VEctors for fast, accurate metabolite identification from tandem mass spectra ADAPTIVE: leArning DAta-dePendenT, concIse molecular VEctors for fast, accurate metabolite identification from tandem mass spectra Bioinformatics (Proceedings of the 27th International Conference on Intelligent Systems for Molecular Biology (ISMB/ECCB 2019)), 35, 14, i164-i172 Bioinformatics (Proceedings of the 27th International Conference on Intelligent Systems for Molecular Biology (ISMB/ECCB 2019)), 35, 14, i164-i172 Bioinformatics (Proceedings of the 27th International Conference on Intelligent Systems for Molecular Biology (ISMB/ECCB 2019)), 35, 14, i164-i172 2019/07 有 英語 研究論文(学術雑誌) 公開
Hiroshi Mamitsuka Hiroshi Mamitsuka Hiroshi Mamitsuka Machine Learning for Marketing Machine Learning for Marketing Machine Learning for Marketing , 1-237 , 1-237 , 1-237 2019/06 英語 公開
Shuigeng Zhou, Yi-Ping Phoebe Chen, Hiroshi Mamitsuka Shuigeng Zhou, Yi-Ping Phoebe Chen, Hiroshi Mamitsuka Shuigeng Zhou, Yi-Ping Phoebe Chen, Hiroshi Mamitsuka Editorial Editorial Editorial IEEE/ACM Transactions on Computational Biology and Bioinformatics, 16, 2, 350 IEEE/ACM Transactions on Computational Biology and Bioinformatics, 16, 2, 350 IEEE/ACM Transactions on Computational Biology and Bioinformatics, 16, 2, 350 2019/03 有 英語 研究論文(学術雑誌) 公開
duVerle DA, Mamitsuka H duVerle DA, Mamitsuka H duVerle DA, Mamitsuka H CalCleaveMKL: a Tool for Calpain Cleavage Prediction. CalCleaveMKL: a Tool for Calpain Cleavage Prediction. CalCleaveMKL: a Tool for Calpain Cleavage Prediction. Methods in molecular biology (Clifton, N.J.), 1915, 121-147 Methods in molecular biology (Clifton, N.J.), 1915, 121-147 Methods in molecular biology (Clifton, N.J.), 1915, 121-147 2019 有 英語 公開
Hiroshi Mamitsuka Hiroshi Mamitsuka Hiroshi Mamitsuka Textbook of Machine Learning and Data Mining (with Bioinformatics Applications) Textbook of Machine Learning and Data Mining (with Bioinformatics Applications) Textbook of Machine Learning and Data Mining (with Bioinformatics Applications) Global Data Science Publishing Global Data Science Publishing Global Data Science Publishing 2018/09 有 英語 公開
Dai Hai Nguyen, Canh Hao Nguyen, Hiroshi Mamitsuka Dai Hai Nguyen, Canh Hao Nguyen, Hiroshi Mamitsuka Dai Hai Nguyen, Canh Hao Nguyen, Hiroshi Mamitsuka Recent Advances and Prospects of Computational Methods for Metabolite Identification: A Review with Emphasis on Machine Learning Approaches Recent Advances and Prospects of Computational Methods for Metabolite Identification: A Review with Emphasis on Machine Learning Approaches Recent Advances and Prospects of Computational Methods for Metabolite Identification: A Review with Emphasis on Machine Learning Approaches Briefings in Bioinformatics Briefings in Bioinformatics Briefings in Bioinformatics 2018/08 有 英語 研究論文(学術雑誌) 公開
Kishan Wimalawarne, Makoto Yamada, Hiroshi Mamitsuka Kishan Wimalawarne, Makoto Yamada, Hiroshi Mamitsuka Kishan Wimalawarne, Makoto Yamada, Hiroshi Mamitsuka Convex Coupled Matrix and Tensor Completion Convex Coupled Matrix and Tensor Completion Convex Coupled Matrix and Tensor Completion Neural Computation Neural Computation Neural Computation 2018/08 有 英語 研究論文(学術雑誌) 公開
Makoto Yamada, Jiliang Tang, Jose Lugo-Martinez, Ermin Hodzic, Raunak Shrestha, Avishek Saha, Hua Ouyang, Dawei Yin, Hiroshi Mamitsuka, Cenk Sahinalp, Predrag Radivojac, Filippo Menczer, Yi Chang Makoto Yamada, Jiliang Tang, Jose Lugo-Martinez, Ermin Hodzic, Raunak Shrestha, Avishek Saha, Hua Ouyang, Dawei Yin, Hiroshi Mamitsuka, Cenk Sahinalp, Predrag Radivojac, Filippo Menczer, Yi Chang Makoto Yamada, Jiliang Tang, Jose Lugo-Martinez, Ermin Hodzic, Raunak Shrestha, Avishek Saha, Hua Ouyang, Dawei Yin, Hiroshi Mamitsuka, Cenk Sahinalp, Predrag Radivojac, Filippo Menczer, Yi Chang Ultra High-Dimensional Nonlinear Feature Selection for Big Biological Data Ultra High-Dimensional Nonlinear Feature Selection for Big Biological Data Ultra High-Dimensional Nonlinear Feature Selection for Big Biological Data IEEE Transactions on Knowledge and Data Engineering, 30, 7, 1352-1365 IEEE Transactions on Knowledge and Data Engineering, 30, 7, 1352-1365 IEEE Transactions on Knowledge and Data Engineering, 30, 7, 1352-1365 2018/07/01 有 英語 研究論文(学術雑誌) 公開
Dai Hai Nguyen, Canh Hao Nguyen, Mamitsuka Hiroshi Dai Hai Nguyen, Canh Hao Nguyen, Mamitsuka Hiroshi Dai Hai Nguyen, Canh Hao Nguyen, Mamitsuka Hiroshi SIMPLE: Sparse Interaction Model over Peaks of moLEcules for fast, interpretable metabolite identification from tandem mass spectra SIMPLE: Sparse Interaction Model over Peaks of moLEcules for fast, interpretable metabolite identification from tandem mass spectra SIMPLE: Sparse Interaction Model over Peaks of moLEcules for fast, interpretable metabolite identification from tandem mass spectra Bioinformatics (Proceedings of the 26th International Conference on Intelligent Systems for Molecular Biology (ISMB 2018)), 34, 13, i323-i332 Bioinformatics (Proceedings of the 26th International Conference on Intelligent Systems for Molecular Biology (ISMB 2018)), 34, 13, i323-i332 Bioinformatics (Proceedings of the 26th International Conference on Intelligent Systems for Molecular Biology (ISMB 2018)), 34, 13, i323-i332 2018/06 有 英語 研究論文(学術雑誌) 公開
You Ronghui, Zhang Zihan, Xiong Yi, Sun Fengzhu, Mamitsuka Hiroshi, Zhu Shanfeng You Ronghui, Zhang Zihan, Xiong Yi, Sun Fengzhu, Mamitsuka Hiroshi, Zhu Shanfeng You Ronghui, Zhang Zihan, Xiong Yi, Sun Fengzhu, Mamitsuka Hiroshi, Zhu Shanfeng GOLabeler: Improving Sequence-based Large-scale Protein Function Prediction by Learning to Rank GOLabeler: Improving Sequence-based Large-scale Protein Function Prediction by Learning to Rank GOLabeler: Improving Sequence-based Large-scale Protein Function Prediction by Learning to Rank Bioinformatics, 34, 14, 2465-2473 Bioinformatics, 34, 14, 2465-2473 Bioinformatics, 34, 14, 2465-2473 2018/03 有 英語 研究論文(学術雑誌) 公開
Gao Junning, Yao Shuwei, Mamitsuka Hiroshi, Zhu Shanfeng Gao Junning, Yao Shuwei, Mamitsuka Hiroshi, Zhu Shanfeng Gao Junning, Yao Shuwei, Mamitsuka Hiroshi, Zhu Shanfeng AiProAnnotator: Low-rank Approximation with network side information for high-performance, large-scale human Protein abnormality Annotator AiProAnnotator: Low-rank Approximation with network side information for high-performance, large-scale human Protein abnormality Annotator AiProAnnotator: Low-rank Approximation with network side information for high-performance, large-scale human Protein abnormality Annotator PROCEEDINGS 2018 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM), 13-20 PROCEEDINGS 2018 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM), 13-20 PROCEEDINGS 2018 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM), 13-20 2018 有 英語 研究論文(国際会議プロシーディングス) 公開
Wimalawarne Kishan, Mamitsuka Hiroshi Wimalawarne Kishan, Mamitsuka Hiroshi Wimalawarne Kishan, Mamitsuka Hiroshi Efficient Convex Completion of Coupled Tensors using Coupled Nuclear Norms Efficient Convex Completion of Coupled Tensors using Coupled Nuclear Norms Efficient Convex Completion of Coupled Tensors using Coupled Nuclear Norms Advances in Neural Information Processing Systems 31: Annual Conference on Neural Information Processing Systems 2018, NeurIPS 2018, 3-8 December 2018, Montréal, Canada., 31, 6902-6910 Advances in Neural Information Processing Systems 31: Annual Conference on Neural Information Processing Systems 2018, NeurIPS 2018, 3-8 December 2018, Montréal, Canada., 31, 6902-6910 Advances in Neural Information Processing Systems 31: Annual Conference on Neural Information Processing Systems 2018, NeurIPS 2018, 3-8 December 2018, Montréal, Canada., 31, 6902-6910 2018 有 公開
Masayuki Karasuyama, Hiroshi Mamitsuka Masayuki Karasuyama, Hiroshi Mamitsuka Masayuki Karasuyama, Hiroshi Mamitsuka Factor Analysis on a Graph. Factor Analysis on a Graph. Factor Analysis on a Graph. International Conference on Artificial Intelligence and Statistics, AISTATS 2018, 9-11 April 2018, Playa Blanca, Lanzarote, Canary Islands, Spain, 1117-1126 International Conference on Artificial Intelligence and Statistics, AISTATS 2018, 9-11 April 2018, Playa Blanca, Lanzarote, Canary Islands, Spain, 1117-1126 International Conference on Artificial Intelligence and Statistics, AISTATS 2018, 9-11 April 2018, Playa Blanca, Lanzarote, Canary Islands, Spain, 1117-1126 2018 有 英語 研究論文(国際会議プロシーディングス) 公開
Kei-ichiro Takahashi, David A. duVerle, Sohiya Yotsukura, Ichigaku Takigawa, Hiroshi Mamitsuka Kei-ichiro Takahashi, David A. duVerle, Sohiya Yotsukura, Ichigaku Takigawa, Hiroshi Mamitsuka Kei-ichiro Takahashi, David A. duVerle, Sohiya Yotsukura, Ichigaku Takigawa, Hiroshi Mamitsuka SiBIC: A Tool for Generating a Network of Biclusters Captured by Maximal Frequent Itemset Mining SiBIC: A Tool for Generating a Network of Biclusters Captured by Maximal Frequent Itemset Mining SiBIC: A Tool for Generating a Network of Biclusters Captured by Maximal Frequent Itemset Mining Methods in Molecular Biology, 1807, 95-111 Methods in Molecular Biology, 1807, 95-111 Methods in Molecular Biology, 1807, 95-111 2018 有 英語 研究論文(学術雑誌) 公開
Jieyao Deng, Qingjun Yuan, Hiroshi Mamitsuka, Shanfeng Zhu Jieyao Deng, Qingjun Yuan, Hiroshi Mamitsuka, Shanfeng Zhu Jieyao Deng, Qingjun Yuan, Hiroshi Mamitsuka, Shanfeng Zhu DrugE-Rank: Predicting Drug-Target Interactions by Learning to Rank DrugE-Rank: Predicting Drug-Target Interactions by Learning to Rank DrugE-Rank: Predicting Drug-Target Interactions by Learning to Rank Methods in Molecular Biology, 1807, 195-202 Methods in Molecular Biology, 1807, 195-202 Methods in Molecular Biology, 1807, 195-202 2018 有 英語 研究論文(学術雑誌) 公開
Shengwen Peng, Hiroshi Mamitsuka, Shanfeng Zhu Shengwen Peng, Hiroshi Mamitsuka, Shanfeng Zhu Shengwen Peng, Hiroshi Mamitsuka, Shanfeng Zhu MeSHLabeler and DeepMeSH: Recent Progress in Large-Scale MeSH Indexing MeSHLabeler and DeepMeSH: Recent Progress in Large-Scale MeSH Indexing MeSHLabeler and DeepMeSH: Recent Progress in Large-Scale MeSH Indexing Methods in Molecular Biology, 1807, 203-209 Methods in Molecular Biology, 1807, 203-209 Methods in Molecular Biology, 1807, 203-209 2018 有 英語 研究論文(学術雑誌) 公開
Hiroshi Mamitsuka Hiroshi Mamitsuka Hiroshi Mamitsuka Data Mining for Systems Biology Data Mining for Systems Biology Data Mining for Systems Biology Methods in Molecular Biology, 1807 Methods in Molecular Biology, 1807 Methods in Molecular Biology, 1807 2018 有 英語 研究論文(その他学術会議資料等) 公開
Mamitsuka H Mamitsuka H Mamitsuka H Preface Preface Preface Methods in Molecular Biology, 1807, v-vi Methods in Molecular Biology, 1807, v-vi Methods in Molecular Biology, 1807, v-vi 2018 有 公開
Mehmet Gonen, Barbara A. Weir, Glenn S. Cowley, Francisca Vazquez, Yuanfang Guan, Alok Jaiswal, Masayuki Karasuyama, Vladislav Uzunangelov, Tao Wang, Aviad Tsherniak, Sara Howell, Daniel Marbach, Bruce Hoff, Thea C. Norman, Antti Airola, Adrian Bivol, Kerstin Bunte, Daniel Carlin, Sahil Chopra, Alden Deran, Kyle Ellrott, Peddinti Gopalacharyulu, Kiley Graim, Samuel Kaski, Suleiman A. Khan, Yulia Newton, Sam Ng, Tapio Pahikkala, Evan Paull, Artem Sokolov, Hao Tang, Jing Tang, Krister Wennerberg, Yang Xie, Xiaowei Zhan, Fan Zhu, Tero Aittokallio, Hiroshi Mamitsuka, Joshua M. Stuart, Jesse S. Boehm, David E. Root, Guanghua Xiao, Gustavo Stolovitzky, William C. Hahn, Adam A. Margolin Mehmet Gonen, Barbara A. Weir, Glenn S. Cowley, Francisca Vazquez, Yuanfang Guan, Alok Jaiswal, Masayuki Karasuyama, Vladislav Uzunangelov, Tao Wang, Aviad Tsherniak, Sara Howell, Daniel Marbach, Bruce Hoff, Thea C. Norman, Antti Airola, Adrian Bivol, Kerstin Bunte, Daniel Carlin, Sahil Chopra, Alden Deran, Kyle Ellrott, Peddinti Gopalacharyulu, Kiley Graim, Samuel Kaski, Suleiman A. Khan, Yulia Newton, Sam Ng, Tapio Pahikkala, Evan Paull, Artem Sokolov, Hao Tang, Jing Tang, Krister Wennerberg, Yang Xie, Xiaowei Zhan, Fan Zhu, Tero Aittokallio, Hiroshi Mamitsuka, Joshua M. Stuart, Jesse S. Boehm, David E. Root, Guanghua Xiao, Gustavo Stolovitzky, William C. Hahn, Adam A. Margolin Mehmet Gonen, Barbara A. Weir, Glenn S. Cowley, Francisca Vazquez, Yuanfang Guan, Alok Jaiswal, Masayuki Karasuyama, Vladislav Uzunangelov, Tao Wang, Aviad Tsherniak, Sara Howell, Daniel Marbach, Bruce Hoff, Thea C. Norman, Antti Airola, Adrian Bivol, Kerstin Bunte, Daniel Carlin, Sahil Chopra, Alden Deran, Kyle Ellrott, Peddinti Gopalacharyulu, Kiley Graim, Samuel Kaski, Suleiman A. Khan, Yulia Newton, Sam Ng, Tapio Pahikkala, Evan Paull, Artem Sokolov, Hao Tang, Jing Tang, Krister Wennerberg, Yang Xie, Xiaowei Zhan, Fan Zhu, Tero Aittokallio, Hiroshi Mamitsuka, Joshua M. Stuart, Jesse S. Boehm, David E. Root, Guanghua Xiao, Gustavo Stolovitzky, William C. Hahn, Adam A. Margolin A Community Challenge for Inferring Genetic Predictors of Gene Essentialities through Analysis of a Functional Screen of Cancer Cell Lines A Community Challenge for Inferring Genetic Predictors of Gene Essentialities through Analysis of a Functional Screen of Cancer Cell Lines A Community Challenge for Inferring Genetic Predictors of Gene Essentialities through Analysis of a Functional Screen of Cancer Cell Lines CELL SYSTEMS, 5, 5, 485-+ CELL SYSTEMS, 5, 5, 485-+ CELL SYSTEMS, 5, 5, 485-+ 2017/11 有 英語 研究論文(学術雑誌) 公開
Makoto Yamada, Wenzhao Lian, Amit Goyal, Jianhui Chen, Kishan Wimalawarne, Suleiman A. Khan, Samuel Kaski, Hiroshi Mamitsuka, Yi Chang Makoto Yamada, Wenzhao Lian, Amit Goyal, Jianhui Chen, Kishan Wimalawarne, Suleiman A. Khan, Samuel Kaski, Hiroshi Mamitsuka, Yi Chang Makoto Yamada, Wenzhao Lian, Amit Goyal, Jianhui Chen, Kishan Wimalawarne, Suleiman A. Khan, Samuel Kaski, Hiroshi Mamitsuka, Yi Chang Convex factorization machine for toxicogenomics prediction Convex factorization machine for toxicogenomics prediction Convex factorization machine for toxicogenomics prediction Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 129685, 1215-1224 Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 129685, 1215-1224 Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 129685, 1215-1224 2017/08/13 有 英語 研究論文(国際会議プロシーディングス) 公開
Sohiya Yotsukura, Masayuki Karasuyama, Ichigaku Takigawa, Hiroshi Mamitsuka Sohiya Yotsukura, Masayuki Karasuyama, Ichigaku Takigawa, Hiroshi Mamitsuka Sohiya Yotsukura, Masayuki Karasuyama, Ichigaku Takigawa, Hiroshi Mamitsuka Exploring phenotype patterns of breast cancer within somatic mutations: A modicum in the intrinsic code Exploring phenotype patterns of breast cancer within somatic mutations: A modicum in the intrinsic code Exploring phenotype patterns of breast cancer within somatic mutations: A modicum in the intrinsic code Briefings in Bioinformatics, 18, 4, 619-633 Briefings in Bioinformatics, 18, 4, 619-633 Briefings in Bioinformatics, 18, 4, 619-633 2017/07/01 有 英語 研究論文(学術雑誌) 公開
Masayuki Karasuyama, Hiroshi Mamitsuka Masayuki Karasuyama, Hiroshi Mamitsuka Masayuki Karasuyama, Hiroshi Mamitsuka Adaptive edge weighting for graph-based learning algorithms Adaptive edge weighting for graph-based learning algorithms Adaptive edge weighting for graph-based learning algorithms MACHINE LEARNING, 106, 2, 307-335 MACHINE LEARNING, 106, 2, 307-335 MACHINE LEARNING, 106, 2, 307-335 2017/02 有 英語 研究論文(学術雑誌) 公開
Ichigaku Takigawa, Hiroshi Mamitsuka Ichigaku Takigawa, Hiroshi Mamitsuka Ichigaku Takigawa, Hiroshi Mamitsuka Generalized Sparse Learning of Linear Models Over the Complete Subgraph Feature Set Generalized Sparse Learning of Linear Models Over the Complete Subgraph Feature Set Generalized Sparse Learning of Linear Models Over the Complete Subgraph Feature Set IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 39, 3, 617-624 IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 39, 3, 617-624 IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 39, 3, 617-624 2017/02 有 英語 研究論文(学術雑誌) 公開
Sohiya Yotsukura, David duverle, Timothy Hancock, Yayoi Natsume-Kitatani, Hiroshi Mamitsuka Sohiya Yotsukura, David duverle, Timothy Hancock, Yayoi Natsume-Kitatani, Hiroshi Mamitsuka Sohiya Yotsukura, David duverle, Timothy Hancock, Yayoi Natsume-Kitatani, Hiroshi Mamitsuka Computational recognition for long non-coding RNA (lncRNA): Software and databases Computational recognition for long non-coding RNA (lncRNA): Software and databases Computational recognition for long non-coding RNA (lncRNA): Software and databases BRIEFINGS IN BIOINFORMATICS, 18, 1, 9-27 BRIEFINGS IN BIOINFORMATICS, 18, 1, 9-27 BRIEFINGS IN BIOINFORMATICS, 18, 1, 9-27 2017/01 有 英語 研究論文(学術雑誌) 公開
Shuigeng Zhou, Phoebe Yi-Ping Chen, Hiroshi Mamitsuka Shuigeng Zhou, Phoebe Yi-Ping Chen, Hiroshi Mamitsuka Shuigeng Zhou, Phoebe Yi-Ping Chen, Hiroshi Mamitsuka Introduction to the special issue on GIW 2016 Introduction to the special issue on GIW 2016 Introduction to the special issue on GIW 2016 Journal of Bioinformatics and Computational Biology, 14, 5 Journal of Bioinformatics and Computational Biology, 14, 5 Journal of Bioinformatics and Computational Biology, 14, 5 2016/10 有 英語 公開
Ian Johnston, Timothy Hancock, Hiroshi Mamitsuka, Luis Carvalho Ian Johnston, Timothy Hancock, Hiroshi Mamitsuka, Luis Carvalho Ian Johnston, Timothy Hancock, Hiroshi Mamitsuka, Luis Carvalho GENE-PROXIMITY MODELS FOR GENOME-WIDE ASSOCIATION STUDIES GENE-PROXIMITY MODELS FOR GENOME-WIDE ASSOCIATION STUDIES GENE-PROXIMITY MODELS FOR GENOME-WIDE ASSOCIATION STUDIES ANNALS OF APPLIED STATISTICS, 10, 3, 1217-1244 ANNALS OF APPLIED STATISTICS, 10, 3, 1217-1244 ANNALS OF APPLIED STATISTICS, 10, 3, 1217-1244 2016/09 有 英語 研究論文(学術雑誌) 公開
Gao, J, Yamada, M, Kaski, S, Mamitsuka, H, Zhu, S Gao, J, Yamada, M, Kaski, S, Mamitsuka, H, Zhu, S Gao, J, Yamada, M, Kaski, S, Mamitsuka, H, Zhu, S A Robust Convex Formulations for Ensemble Clustering. A Robust Convex Formulations for Ensemble Clustering. A Robust Convex Formulations for Ensemble Clustering. Proceedings of the 25th International Joint Conference on Artificial Intelligence (IJCAI 2016), 1476-1482 Proceedings of the 25th International Joint Conference on Artificial Intelligence (IJCAI 2016), 1476-1482 Proceedings of the 25th International Joint Conference on Artificial Intelligence (IJCAI 2016), 1476-1482 2016/07 有 英語 研究論文(国際会議プロシーディングス) 公開
Ahmed Mohamed, Canh Hao Nguyen, Hiroshi Mamitsuka Ahmed Mohamed, Canh Hao Nguyen, Hiroshi Mamitsuka Ahmed Mohamed, Canh Hao Nguyen, Hiroshi Mamitsuka NMRPro: an integrated web component for interactive processing and visualization of NMR spectra NMRPro: an integrated web component for interactive processing and visualization of NMR spectra NMRPro: an integrated web component for interactive processing and visualization of NMR spectra BIOINFORMATICS, 32, 13, 2067-2068 BIOINFORMATICS, 32, 13, 2067-2068 BIOINFORMATICS, 32, 13, 2067-2068 2016/07 有 英語 研究論文(学術雑誌) 公開
Shengwen Peng, Ronghui You, Hongning Wang, Chengxiang Zhai, Hiroshi Mamitsuka, Shanfeng Zhu Shengwen Peng, Ronghui You, Hongning Wang, Chengxiang Zhai, Hiroshi Mamitsuka, Shanfeng Zhu Shengwen Peng, Ronghui You, Hongning Wang, Chengxiang Zhai, Hiroshi Mamitsuka, Shanfeng Zhu DeepMeSH: deep semantic representation for improving large-scale MeSH indexing DeepMeSH: deep semantic representation for improving large-scale MeSH indexing DeepMeSH: deep semantic representation for improving large-scale MeSH indexing BIOINFORMATICS, 32, 12, 70-79 BIOINFORMATICS, 32, 12, 70-79 BIOINFORMATICS, 32, 12, 70-79 2016/06 有 英語 研究論文(学術雑誌) 公開
Qingjun Yuan, Junning Gao, Dongliang Wu, Shihua Zhang, Hiroshi Mamitsuka, Shanfeng Zhu Qingjun Yuan, Junning Gao, Dongliang Wu, Shihua Zhang, Hiroshi Mamitsuka, Shanfeng Zhu Qingjun Yuan, Junning Gao, Dongliang Wu, Shihua Zhang, Hiroshi Mamitsuka, Shanfeng Zhu DrugE-Rank: improving drug-target interaction prediction of new candidate drugs or targets by ensemble learning to rank DrugE-Rank: improving drug-target interaction prediction of new candidate drugs or targets by ensemble learning to rank DrugE-Rank: improving drug-target interaction prediction of new candidate drugs or targets by ensemble learning to rank BIOINFORMATICS, 32, 12, 18-27 BIOINFORMATICS, 32, 12, 18-27 BIOINFORMATICS, 32, 12, 18-27 2016/06 有 英語 研究論文(学術雑誌) 公開
Nguyen, C. H, Mamitsuka, H Nguyen, C. H, Mamitsuka, H Nguyen, C. H, Mamitsuka, H New Resistance Distances with Global Information on Large Graphs. New Resistance Distances with Global Information on Large Graphs. New Resistance Distances with Global Information on Large Graphs. JMLR Workshop and Conference Proceedings (Proceedings of the Nineteenth International Conference on Artificial Intelligence and Statistics (AISTATS 2016)), 51, 639-647 JMLR Workshop and Conference Proceedings (Proceedings of the Nineteenth International Conference on Artificial Intelligence and Statistics (AISTATS 2016)), 51, 639-647 JMLR Workshop and Conference Proceedings (Proceedings of the Nineteenth International Conference on Artificial Intelligence and Statistics (AISTATS 2016)), 51, 639-647 2016/05 有 英語 研究論文(国際会議プロシーディングス) 公開
Xu, Y, Luo, C, Mamitsuka, H, Zhu, S Xu, Y, Luo, C, Mamitsuka, H, Zhu, S Xu, Y, Luo, C, Mamitsuka, H, Zhu, S MetaMHCpan, A Meta Apporach for Pan-specific MHC Peptide Binding Prediction. MetaMHCpan, A Meta Apporach for Pan-specific MHC Peptide Binding Prediction. MetaMHCpan, A Meta Apporach for Pan-specific MHC Peptide Binding Prediction. Methods in Molecular Biology, 1404, 753-760 Methods in Molecular Biology, 1404, 753-760 Methods in Molecular Biology, 1404, 753-760 2016/04 有 英語 研究論文(学術雑誌) 公開
Fumiko Shinkai-Ouchi, Suguru Koyama, Yasuko Ono, Shoji Hata, Koichi Ojima, Mayumi Shindo, David duVerle, Mika Ueno, Fujiko Kitamura, Naoko Doi, Ichigaku Takigawa, Hiroshi Mamitsuka, Hiroyuki Sorimachi Fumiko Shinkai-Ouchi, Suguru Koyama, Yasuko Ono, Shoji Hata, Koichi Ojima, Mayumi Shindo, David duVerle, Mika Ueno, Fujiko Kitamura, Naoko Doi, Ichigaku Takigawa, Hiroshi Mamitsuka, Hiroyuki Sorimachi Fumiko Shinkai-Ouchi, Suguru Koyama, Yasuko Ono, Shoji Hata, Koichi Ojima, Mayumi Shindo, David duVerle, Mika Ueno, Fujiko Kitamura, Naoko Doi, Ichigaku Takigawa, Hiroshi Mamitsuka, Hiroyuki Sorimachi Predictions of Cleavability of Calpain Proteolysis by Quantitative Structure-Activity Relationship Analysis Using Newly Determined Cleavage Sites and Catalytic Efficiencies of an Oligopeptide Array Predictions of Cleavability of Calpain Proteolysis by Quantitative Structure-Activity Relationship Analysis Using Newly Determined Cleavage Sites and Catalytic Efficiencies of an Oligopeptide Array Predictions of Cleavability of Calpain Proteolysis by Quantitative Structure-Activity Relationship Analysis Using Newly Determined Cleavage Sites and Catalytic Efficiencies of an Oligopeptide Array MOLECULAR & CELLULAR PROTEOMICS, 15, 4, 1262-1280 MOLECULAR & CELLULAR PROTEOMICS, 15, 4, 1262-1280 MOLECULAR & CELLULAR PROTEOMICS, 15, 4, 1262-1280 2016/04 有 英語 研究論文(学術雑誌) 公開
Yayoi Natsume-Kitatani, Hiroshi Mamitsuka Yayoi Natsume-Kitatani, Hiroshi Mamitsuka Yayoi Natsume-Kitatani, Hiroshi Mamitsuka Classification of Promoters Based on the Combination of Core Promoter Elements Exhibits Different Histone Modification Patterns Classification of Promoters Based on the Combination of Core Promoter Elements Exhibits Different Histone Modification Patterns Classification of Promoters Based on the Combination of Core Promoter Elements Exhibits Different Histone Modification Patterns PLOS ONE, 11, 3, e0151917 PLOS ONE, 11, 3, e0151917 PLOS ONE, 11, 3, e0151917 2016/03 有 英語 研究論文(学術雑誌) 公開
Ahmed Mohamed, Canh Hao Nguyen, Hiroshi Mamitsuka Ahmed Mohamed, Canh Hao Nguyen, Hiroshi Mamitsuka Ahmed Mohamed, Canh Hao Nguyen, Hiroshi Mamitsuka Current status and prospects of computational resources for natural product dereplication: a review Current status and prospects of computational resources for natural product dereplication: a review Current status and prospects of computational resources for natural product dereplication: a review BRIEFINGS IN BIOINFORMATICS, 17, 2, 309-321 BRIEFINGS IN BIOINFORMATICS, 17, 2, 309-321 BRIEFINGS IN BIOINFORMATICS, 17, 2, 309-321 2016/03 有 英語 研究論文(学術雑誌) 公開
Atsuyoshi Nakamura, Ichigaku Takigawa, Hisashi Tosaka, Mineichi Kudo, Hiroshi Mamitsuka Atsuyoshi Nakamura, Ichigaku Takigawa, Hisashi Tosaka, Mineichi Kudo, Hiroshi Mamitsuka Atsuyoshi Nakamura, Ichigaku Takigawa, Hisashi Tosaka, Mineichi Kudo, Hiroshi Mamitsuka Mining approximate patterns with frequent locally optimal occurrences Mining approximate patterns with frequent locally optimal occurrences Mining approximate patterns with frequent locally optimal occurrences DISCRETE APPLIED MATHEMATICS, 200, 123-152 DISCRETE APPLIED MATHEMATICS, 200, 123-152 DISCRETE APPLIED MATHEMATICS, 200, 123-152 2016/02 有 英語 研究論文(学術雑誌) 公開
Sohiya Yotsukura, Masayuki Karasuyama, Ichigaku Takigawa, Hiroshi Mamitsuka Sohiya Yotsukura, Masayuki Karasuyama, Ichigaku Takigawa, Hiroshi Mamitsuka Sohiya Yotsukura, Masayuki Karasuyama, Ichigaku Takigawa, Hiroshi Mamitsuka A bioinformatics approach for understanding genotype-phenotype correlation in breast cancer A bioinformatics approach for understanding genotype-phenotype correlation in breast cancer A bioinformatics approach for understanding genotype-phenotype correlation in breast cancer Big Data Analytics in Genomics, 397-428 Big Data Analytics in Genomics, 397-428 Big Data Analytics in Genomics, 397-428 2016/01/01 有 英語 公開
Wicker, N, Nguyen, C. H, Mamitsuka, H Wicker, N, Nguyen, C. H, Mamitsuka, H Wicker, N, Nguyen, C. H, Mamitsuka, H Some Properties of a Dissimilarity Measure for Labeled Graphs. Some Properties of a Dissimilarity Measure for Labeled Graphs. Some Properties of a Dissimilarity Measure for Labeled Graphs. Publications Mathématiques de Besançon: Algèbre et Théorie des Nombres, 85-94 Publications Mathématiques de Besançon: Algèbre et Théorie des Nombres, 85-94 Publications Mathématiques de Besançon: Algèbre et Théorie des Nombres, 85-94 2016 有 英語 研究論文(学術雑誌) 公開
Jing Zhou, Yuxuan Shui, Shengwen Peng, Xuhui Li, Hiroshi Mamitsuka, Shanfeng Zhu Jing Zhou, Yuxuan Shui, Shengwen Peng, Xuhui Li, Hiroshi Mamitsuka, Shanfeng Zhu Jing Zhou, Yuxuan Shui, Shengwen Peng, Xuhui Li, Hiroshi Mamitsuka, Shanfeng Zhu MeSHSim: An R/Bioconductor package for measuring semantic similarity over MeSH headings and MEDLINE documents MeSHSim: An R/Bioconductor package for measuring semantic similarity over MeSH headings and MEDLINE documents MeSHSim: An R/Bioconductor package for measuring semantic similarity over MeSH headings and MEDLINE documents JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 13, 6, 1542002 JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 13, 6, 1542002 JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 13, 6, 1542002 2015/12 有 英語 研究論文(学術雑誌) 公開
Beichen Wang, Xiaodong Chen, Hiroshi Mamitsuka, Shanfeng Zhu Beichen Wang, Xiaodong Chen, Hiroshi Mamitsuka, Shanfeng Zhu Beichen Wang, Xiaodong Chen, Hiroshi Mamitsuka, Shanfeng Zhu BMExpert: Mining MEDLINE for Finding Experts in Biomedical Domains Based on Language Model BMExpert: Mining MEDLINE for Finding Experts in Biomedical Domains Based on Language Model BMExpert: Mining MEDLINE for Finding Experts in Biomedical Domains Based on Language Model IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 12, 6, 1286-1294 IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 12, 6, 1286-1294 IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 12, 6, 1286-1294 2015/11 有 英語 研究論文(学術雑誌) 公開
馬見塚 拓 馬見塚 拓 機械学習による薬物分子-ターゲット相互作用予測 機械学習による薬物分子-ターゲット相互作用予測 SAR News, 29, 2-8 SAR News, 29, 2-8 , 29, 2-8 2015/10 日本語 研究論文(学術雑誌) 公開
Zheng, X, Zhu, S, Gao, J, Mamitsuka, H Zheng, X, Zhu, S, Gao, J, Mamitsuka, H Zheng, X, Zhu, S, Gao, J, Mamitsuka, H Instance-wise Weighted Nonnegative Matrix Factorization for Aggregating Partitions with Locally Reliable Clusters. Instance-wise Weighted Nonnegative Matrix Factorization for Aggregating Partitions with Locally Reliable Clusters. Instance-wise Weighted Nonnegative Matrix Factorization for Aggregating Partitions with Locally Reliable Clusters. Proceedings of the 24th International Joint Conference on Artificial Intelligence (IJCAI 2015), 4091-4097 Proceedings of the 24th International Joint Conference on Artificial Intelligence (IJCAI 2015), 4091-4097 Proceedings of the 24th International Joint Conference on Artificial Intelligence (IJCAI 2015), 4091-4097 2015/07 有 英語 研究論文(国際会議プロシーディングス) 公開
Hiromi Baba, Jun-ichi Takahara, Hiroshi Mamitsuka Hiromi Baba, Jun-ichi Takahara, Hiroshi Mamitsuka Hiromi Baba, Jun-ichi Takahara, Hiroshi Mamitsuka In Silico Predictions of Human Skin Permeability using Nonlinear Quantitative Structure-Property Relationship Models In Silico Predictions of Human Skin Permeability using Nonlinear Quantitative Structure-Property Relationship Models In Silico Predictions of Human Skin Permeability using Nonlinear Quantitative Structure-Property Relationship Models PHARMACEUTICAL RESEARCH, 32, 7, 2360-2371 PHARMACEUTICAL RESEARCH, 32, 7, 2360-2371 PHARMACEUTICAL RESEARCH, 32, 7, 2360-2371 2015/07 有 英語 研究論文(学術雑誌) 公開
Ke Liu, Shengwen Peng, Junqiu Wu, Chengxiang Zhai, Hiroshi Mamitsuka, Shanfeng Zhu Ke Liu, Shengwen Peng, Junqiu Wu, Chengxiang Zhai, Hiroshi Mamitsuka, Shanfeng Zhu Ke Liu, Shengwen Peng, Junqiu Wu, Chengxiang Zhai, Hiroshi Mamitsuka, Shanfeng Zhu MeSHLabeler: improving the accuracy of large-scale MeSH indexing by integrating diverse evidence MeSHLabeler: improving the accuracy of large-scale MeSH indexing by integrating diverse evidence MeSHLabeler: improving the accuracy of large-scale MeSH indexing by integrating diverse evidence BIOINFORMATICS, 31, 12, 339-347 BIOINFORMATICS, 31, 12, 339-347 BIOINFORMATICS, 31, 12, 339-347 2015/06 有 英語 研究論文(学術雑誌) 公開
Motoki Shiga, Hiroshi Mamitsuka Motoki Shiga, Hiroshi Mamitsuka Motoki Shiga, Hiroshi Mamitsuka Non-Negative Matrix Factorization with Auxiliary Information on Overlapping Groups Non-Negative Matrix Factorization with Auxiliary Information on Overlapping Groups Non-Negative Matrix Factorization with Auxiliary Information on Overlapping Groups IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING, 27, 6, 1615-1628 IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING, 27, 6, 1615-1628 IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING, 27, 6, 1615-1628 2015/06 有 英語 研究論文(学術雑誌) 公開
Sohiya Yotsukura, Hiroshi Mamitsuka Sohiya Yotsukura, Hiroshi Mamitsuka Sohiya Yotsukura, Hiroshi Mamitsuka Evaluation of serum-based cancer biomarkers: A brief review from a clinical and computational viewpoint Evaluation of serum-based cancer biomarkers: A brief review from a clinical and computational viewpoint Evaluation of serum-based cancer biomarkers: A brief review from a clinical and computational viewpoint CRITICAL REVIEWS IN ONCOLOGY HEMATOLOGY, 93, 2, 103-115 CRITICAL REVIEWS IN ONCOLOGY HEMATOLOGY, 93, 2, 103-115 CRITICAL REVIEWS IN ONCOLOGY HEMATOLOGY, 93, 2, 103-115 2015/02 有 英語 研究論文(学術雑誌) 公開
Ahmed Mohamed, Timothy Hancock, Canh Hao Nguyen, Hiroshi Mamitsuka Ahmed Mohamed, Timothy Hancock, Canh Hao Nguyen, Hiroshi Mamitsuka Ahmed Mohamed, Timothy Hancock, Canh Hao Nguyen, Hiroshi Mamitsuka NetPathMiner: R/Bioconductor package for network path mining through gene expression NetPathMiner: R/Bioconductor package for network path mining through gene expression NetPathMiner: R/Bioconductor package for network path mining through gene expression BIOINFORMATICS, 30, 21, 3139-3141 BIOINFORMATICS, 30, 21, 3139-3141 BIOINFORMATICS, 30, 21, 3139-3141 2014/11 有 英語 研究論文(学術雑誌) 公開
Hao Ding, Ichigaku Takigawa, Hiroshi Mamitsuka, Shanfeng Zhu Hao Ding, Ichigaku Takigawa, Hiroshi Mamitsuka, Shanfeng Zhu Hao Ding, Ichigaku Takigawa, Hiroshi Mamitsuka, Shanfeng Zhu Similarity-based machine learning methods for predicting drug-target interactions: a brief review Similarity-based machine learning methods for predicting drug-target interactions: a brief review Similarity-based machine learning methods for predicting drug-target interactions: a brief review BRIEFINGS IN BIOINFORMATICS, 15, 5, 734-747 BRIEFINGS IN BIOINFORMATICS, 15, 5, 734-747 BRIEFINGS IN BIOINFORMATICS, 15, 5, 734-747 2014/09 有 英語 研究論文(学術雑誌) 公開
Canh Hao Nguyen, Nicolas Wicker, Hiroshi Mamitsuka Canh Hao Nguyen, Nicolas Wicker, Hiroshi Mamitsuka Canh Hao Nguyen, Nicolas Wicker, Hiroshi Mamitsuka Selecting Graph Cut Solutions via Global Graph Similarity Selecting Graph Cut Solutions via Global Graph Similarity Selecting Graph Cut Solutions via Global Graph Similarity IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 25, 7, 1407-1412 IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 25, 7, 1407-1412 IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 25, 7, 1407-1412 2014/07 有 英語 研究論文(学術雑誌) 公開
Mitsunori Kayano, Motoki Shiga, Hiroshi Mamitsuka Mitsunori Kayano, Motoki Shiga, Hiroshi Mamitsuka Mitsunori Kayano, Motoki Shiga, Hiroshi Mamitsuka Detecting Differentially Coexpressed Genes from Labeled Expression Data: A Brief Review Detecting Differentially Coexpressed Genes from Labeled Expression Data: A Brief Review Detecting Differentially Coexpressed Genes from Labeled Expression Data: A Brief Review IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 11, 1, 154-167 IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 11, 1, 154-167 IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 11, 1, 154-167 2014/01 有 英語 研究論文(学術雑誌) 公開
Kei-Ichiro Takahashi, Ichigaku Takigawa, Hiroshi Mamitsuka Kei-Ichiro Takahashi, Ichigaku Takigawa, Hiroshi Mamitsuka Kei-Ichiro Takahashi, Ichigaku Takigawa, Hiroshi Mamitsuka SiBIC: A web server for generating gene set networks based on biclusters obtained by maximal frequent itemset mining SiBIC: A web server for generating gene set networks based on biclusters obtained by maximal frequent itemset mining SiBIC: A web server for generating gene set networks based on biclusters obtained by maximal frequent itemset mining PLoS ONE, 8, 12, e82890 PLoS ONE, 8, 12, e82890 PLoS ONE, 8, 12, e82890 2013/12/30 有 英語 研究論文(学術雑誌) 公開
Masayuki Karasuyama, Hiroshi Mamitsuka Masayuki Karasuyama, Hiroshi Mamitsuka Masayuki Karasuyama, Hiroshi Mamitsuka Multiple Graph Label Propagation by Sparse Integration Multiple Graph Label Propagation by Sparse Integration Multiple Graph Label Propagation by Sparse Integration IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 24, 12, 1999-2012 IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 24, 12, 1999-2012 IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 24, 12, 1999-2012 2013/12 有 英語 研究論文(学術雑誌) 公開
Karasuyama, M, Mamitsuka, H Karasuyama, M, Mamitsuka, H Karasuyama, M, Mamitsuka, H Manifold-based Similarity Adaptation for Label Propagation. Manifold-based Similarity Adaptation for Label Propagation. Manifold-based Similarity Adaptation for Label Propagation. Proceedings of the Twenty-Seventh Annual Conference on Neural Information Processing Systems (NIPS 2013), 1547-1555 Proceedings of the Twenty-Seventh Annual Conference on Neural Information Processing Systems (NIPS 2013), 1547-1555 Proceedings of the Twenty-Seventh Annual Conference on Neural Information Processing Systems (NIPS 2013), 1547-1555 2013/12 有 英語 研究論文(国際会議プロシーディングス) 公開
Xiaodong Zheng, Hao Ding, Hiroshi Mamitsuka, Shanfeng Zhu Xiaodong Zheng, Hao Ding, Hiroshi Mamitsuka, Shanfeng Zhu Xiaodong Zheng, Hao Ding, Hiroshi Mamitsuka, Shanfeng Zhu Collaborative matrix factorization with multiple similarities for predicting drug-Target interactions Collaborative matrix factorization with multiple similarities for predicting drug-Target interactions Collaborative matrix factorization with multiple similarities for predicting drug-Target interactions Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 128815, 1025-1033 Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 128815, 1025-1033 Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 128815, 1025-1033 2013/08/11 有 英語 研究論文(国際会議プロシーディングス) 公開
Jun Gu, Wei Feng, Jia Zeng, Hiroshi Mamitsuka, Shanfeng Zhu Jun Gu, Wei Feng, Jia Zeng, Hiroshi Mamitsuka, Shanfeng Zhu Jun Gu, Wei Feng, Jia Zeng, Hiroshi Mamitsuka, Shanfeng Zhu Efficient Semisupervised MEDLINE Document Clustering With MeSH-Semantic and Global-Content Constraints Efficient Semisupervised MEDLINE Document Clustering With MeSH-Semantic and Global-Content Constraints Efficient Semisupervised MEDLINE Document Clustering With MeSH-Semantic and Global-Content Constraints IEEE TRANSACTIONS ON CYBERNETICS, 43, 4, 1265-1276 IEEE TRANSACTIONS ON CYBERNETICS, 43, 4, 1265-1276 IEEE TRANSACTIONS ON CYBERNETICS, 43, 4, 1265-1276 2013/08 有 英語 研究論文(学術雑誌) 公開
Atsuyoshi Nakamura, Tomoya Saito, Ichigaku Takigawa, Mineichi Kudo, Hiroshi Mamitsuka Atsuyoshi Nakamura, Tomoya Saito, Ichigaku Takigawa, Mineichi Kudo, Hiroshi Mamitsuka Atsuyoshi Nakamura, Tomoya Saito, Ichigaku Takigawa, Mineichi Kudo, Hiroshi Mamitsuka Fast algorithms for finding a minimum repetition representation of strings and trees Fast algorithms for finding a minimum repetition representation of strings and trees Fast algorithms for finding a minimum repetition representation of strings and trees Discrete Applied Mathematics, 161, 10-11, 1556-1575 Discrete Applied Mathematics, 161, 10-11, 1556-1575 Discrete Applied Mathematics, 161, 10-11, 1556-1575 2013/07 有 英語 研究論文(学術雑誌) 公開
Nicolas Wicker, Canh Hao Nguyen, Hiroshi Mamitsuka Nicolas Wicker, Canh Hao Nguyen, Hiroshi Mamitsuka Nicolas Wicker, Canh Hao Nguyen, Hiroshi Mamitsuka A new dissimilarity measure for comparing labeled graphs A new dissimilarity measure for comparing labeled graphs A new dissimilarity measure for comparing labeled graphs LINEAR ALGEBRA AND ITS APPLICATIONS, 438, 5, 2331-2338 LINEAR ALGEBRA AND ITS APPLICATIONS, 438, 5, 2331-2338 LINEAR ALGEBRA AND ITS APPLICATIONS, 438, 5, 2331-2338 2013/03 有 英語 研究論文(学術雑誌) 公開
Ichigaku Takigawa, Hiroshi Mamitsuka Ichigaku Takigawa, Hiroshi Mamitsuka Ichigaku Takigawa, Hiroshi Mamitsuka Graph mining: procedure, application to drug discovery and recent advances Graph mining: procedure, application to drug discovery and recent advances Graph mining: procedure, application to drug discovery and recent advances DRUG DISCOVERY TODAY, 18, 1-2, 50-57 DRUG DISCOVERY TODAY, 18, 1-2, 50-57 DRUG DISCOVERY TODAY, 18, 1-2, 50-57 2013/01 有 英語 研究論文(学術雑誌) 公開
Tadashi Yamamoto, Keiichi Nakayama, Hisashi Hirano, Takeshi Tomonaga, Yasushi Ishihama, Tetsushi Yamada, Tadashi Kondo, Yoshio Kodera, Yuichi Satop, None Araki, Hiroshi Mamitsuka, Naoki Goshima Tadashi Yamamoto, Keiichi Nakayama, Hisashi Hirano, Takeshi Tomonaga, Yasushi Ishihama, Tetsushi Yamada, Tadashi Kondo, Yoshio Kodera, Yuichi Satop, None Araki, Hiroshi Mamitsuka, Naoki Goshima Tadashi Yamamoto, Keiichi Nakayama, Hisashi Hirano, Takeshi Tomonaga, Yasushi Ishihama, Tetsushi Yamada, Tadashi Kondo, Yoshio Kodera, Yuichi Satop, None Araki, Hiroshi Mamitsuka, Naoki Goshima Integrated View of the Human Chromosome X-centric Proteome Project Integrated View of the Human Chromosome X-centric Proteome Project Integrated View of the Human Chromosome X-centric Proteome Project JOURNAL OF PROTEOME RESEARCH, 12, 1, 58-61 JOURNAL OF PROTEOME RESEARCH, 12, 1, 58-61 JOURNAL OF PROTEOME RESEARCH, 12, 1, 58-61 2013/01 有 英語 研究論文(学術雑誌) 公開
Mamitsuka, H, DeLisi, C, Kanehisa, M Mamitsuka, H, DeLisi, C, Kanehisa, M Mamitsuka, H, DeLisi, C, Kanehisa, M Preface Preface Preface Methods in Molecular Biology, 939, v-vii Methods in Molecular Biology, 939, v-vii Methods in Molecular Biology, 939, v-vii 2013 英語 公開
Motoki Shiga, Hiroshi Mamitsuka Motoki Shiga, Hiroshi Mamitsuka Motoki Shiga, Hiroshi Mamitsuka Variational Bayes co-clustering with auxiliary information Variational Bayes co-clustering with auxiliary information Variational Bayes co-clustering with auxiliary information MultiClust 2013 - 4th Workshop on Multiple Clusterings, Multi-View Data, and Multi-Source Knowledge-Driven Clustering, in Conj. with the 19th ACM SIGKDD Int. Conf. on KDD 2013, Article No.5 MultiClust 2013 - 4th Workshop on Multiple Clusterings, Multi-View Data, and Multi-Source Knowledge-Driven Clustering, in Conj. with the 19th ACM SIGKDD Int. Conf. on KDD 2013, Article No.5 MultiClust 2013 - 4th Workshop on Multiple Clusterings, Multi-View Data, and Multi-Source Knowledge-Driven Clustering, in Conj. with the 19th ACM SIGKDD Int. Conf. on KDD 2013, Article No.5 2013 有 英語 研究論文(国際会議プロシーディングス) 公開
David A. duVerle, Hiroshi Mamitsuka David A. duVerle, Hiroshi Mamitsuka David A. duVerle, Hiroshi Mamitsuka Machine Learning Sequence Classification Techniques: Application to Cysteine Protease Cleavage Prediction Machine Learning Sequence Classification Techniques: Application to Cysteine Protease Cleavage Prediction Machine Learning Sequence Classification Techniques: Application to Cysteine Protease Cleavage Prediction CURRENT BIOINFORMATICS, 7, 4, 415-423 CURRENT BIOINFORMATICS, 7, 4, 415-423 CURRENT BIOINFORMATICS, 7, 4, 415-423 2012/12 有 英語 研究論文(学術雑誌) 公開
Canh Hao Nguyen, Hiroshi Mamitsuka Canh Hao Nguyen, Hiroshi Mamitsuka Canh Hao Nguyen, Hiroshi Mamitsuka Latent Feature Kernels for Link Prediction on Sparse Graphs Latent Feature Kernels for Link Prediction on Sparse Graphs Latent Feature Kernels for Link Prediction on Sparse Graphs IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 23, 11, 1793-1804 IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 23, 11, 1793-1804 IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 23, 11, 1793-1804 2012/11 有 英語 研究論文(学術雑誌) 公開
Timothy Hancock, Hiroshi Mamitsuka Timothy Hancock, Hiroshi Mamitsuka Timothy Hancock, Hiroshi Mamitsuka Boosted Network Classifiers for Local Feature Selection Boosted Network Classifiers for Local Feature Selection Boosted Network Classifiers for Local Feature Selection IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 23, 11, 1767-1778 IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 23, 11, 1767-1778 IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 23, 11, 1767-1778 2012/11 有 英語 研究論文(学術雑誌) 公開
Hiroshi Mamitsuka Hiroshi Mamitsuka Hiroshi Mamitsuka Mining from protein-protein interactions Mining from protein-protein interactions Mining from protein-protein interactions WILEY INTERDISCIPLINARY REVIEWS-DATA MINING AND KNOWLEDGE DISCOVERY, 2, 5, 400-410 WILEY INTERDISCIPLINARY REVIEWS-DATA MINING AND KNOWLEDGE DISCOVERY, 2, 5, 400-410 WILEY INTERDISCIPLINARY REVIEWS-DATA MINING AND KNOWLEDGE DISCOVERY, 2, 5, 400-410 2012/09 有 英語 研究論文(学術雑誌) 公開
Hiroyuki Sorimachi, Hiroshi Mamitsuka, Yasuko Ono Hiroyuki Sorimachi, Hiroshi Mamitsuka, Yasuko Ono Hiroyuki Sorimachi, Hiroshi Mamitsuka, Yasuko Ono Understanding the substrate specificity of conventional calpains Understanding the substrate specificity of conventional calpains Understanding the substrate specificity of conventional calpains BIOLOGICAL CHEMISTRY, 393, 9, 853-871 BIOLOGICAL CHEMISTRY, 393, 9, 853-871 BIOLOGICAL CHEMISTRY, 393, 9, 853-871 2012/09 有 英語 研究論文(学術雑誌) 公開
Lianming Zhang, Keiko Udaka, Hiroshi Mamitsuka, Shanfeng Zhu Lianming Zhang, Keiko Udaka, Hiroshi Mamitsuka, Shanfeng Zhu Lianming Zhang, Keiko Udaka, Hiroshi Mamitsuka, Shanfeng Zhu Toward more accurate pan-specific MHC-peptide binding prediction: a review of current methods and tools Toward more accurate pan-specific MHC-peptide binding prediction: a review of current methods and tools Toward more accurate pan-specific MHC-peptide binding prediction: a review of current methods and tools BRIEFINGS IN BIOINFORMATICS, 13, 3, 350-364 BRIEFINGS IN BIOINFORMATICS, 13, 3, 350-364 BRIEFINGS IN BIOINFORMATICS, 13, 3, 350-364 2012/05 有 英語 研究論文(学術雑誌) 公開
David A. duVerle, Hiroshi Mamitsuka David A. duVerle, Hiroshi Mamitsuka David A. duVerle, Hiroshi Mamitsuka A review of statistical methods for prediction of proteolytic cleavage A review of statistical methods for prediction of proteolytic cleavage A review of statistical methods for prediction of proteolytic cleavage BRIEFINGS IN BIOINFORMATICS, 13, 3, 337-349 BRIEFINGS IN BIOINFORMATICS, 13, 3, 337-349 BRIEFINGS IN BIOINFORMATICS, 13, 3, 337-349 2012/05 有 英語 研究論文(学術雑誌) 公開
茅野 光範, 馬見塚 拓 茅野 光範, 馬見塚 拓 Close up実験法 Series225 ROS-DETによる遺伝子「スイッチ発現」検出 Close up実験法 Series225 ROS-DETによる遺伝子「スイッチ発現」検出 実験医学, 30, 6, 969-974 実験医学, 30, 6, 969-974 , 30, 6, 969-974 2012/04 日本語 研究論文(学術雑誌) 公開
Motoki Shiga, Hiroshi Mamitsuka Motoki Shiga, Hiroshi Mamitsuka Motoki Shiga, Hiroshi Mamitsuka A Variational Bayesian Framework for Clustering with Multiple Graphs A Variational Bayesian Framework for Clustering with Multiple Graphs A Variational Bayesian Framework for Clustering with Multiple Graphs IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING, 24, 4, 577-589 IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING, 24, 4, 577-589 IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING, 24, 4, 577-589 2012/04 有 英語 研究論文(学術雑誌) 公開
Motoki Shiga, Hiroshi Mamitsuka Motoki Shiga, Hiroshi Mamitsuka Motoki Shiga, Hiroshi Mamitsuka Efficient semi-supervised learning on locally informative multiple graphs Efficient semi-supervised learning on locally informative multiple graphs Efficient semi-supervised learning on locally informative multiple graphs PATTERN RECOGNITION, 45, 3, 1035-1049 PATTERN RECOGNITION, 45, 3, 1035-1049 PATTERN RECOGNITION, 45, 3, 1035-1049 2012/03 有 英語 研究論文(学術雑誌) 公開
Lianming Zhang, Yiqing Chen, Hau-San Wong, Shuigeng Zhou, Hiroshi Mamitsuka, Shanfeng Zhu Lianming Zhang, Yiqing Chen, Hau-San Wong, Shuigeng Zhou, Hiroshi Mamitsuka, Shanfeng Zhu Lianming Zhang, Yiqing Chen, Hau-San Wong, Shuigeng Zhou, Hiroshi Mamitsuka, Shanfeng Zhu TEPITOPEpan: Extending TEPITOPE for Peptide Binding Prediction Covering over 700 HLA-DR Molecules TEPITOPEpan: Extending TEPITOPE for Peptide Binding Prediction Covering over 700 HLA-DR Molecules TEPITOPEpan: Extending TEPITOPE for Peptide Binding Prediction Covering over 700 HLA-DR Molecules PLOS ONE, 7, 2, e30483 PLOS ONE, 7, 2, e30483 PLOS ONE, 7, 2, e30483 2012/02 有 英語 研究論文(学術雑誌) 公開
Timothy Hancock, Nicolas Wicker, Ichigaku Takigawa, Hiroshi Mamitsuka Timothy Hancock, Nicolas Wicker, Ichigaku Takigawa, Hiroshi Mamitsuka Timothy Hancock, Nicolas Wicker, Ichigaku Takigawa, Hiroshi Mamitsuka Identifying Neighborhoods of Coordinated Gene Expression and Metabolite Profiles Identifying Neighborhoods of Coordinated Gene Expression and Metabolite Profiles Identifying Neighborhoods of Coordinated Gene Expression and Metabolite Profiles PLOS ONE, 7, 2, e31345 PLOS ONE, 7, 2, e31345 PLOS ONE, 7, 2, e31345 2012/02 有 英語 研究論文(学術雑誌) 公開
Xihao Hu, Hiroshi Mamitsuka, Shanfeng Zhu Xihao Hu, Hiroshi Mamitsuka, Shanfeng Zhu Xihao Hu, Hiroshi Mamitsuka, Shanfeng Zhu Ensemble approaches for improving HLA Class I-peptide binding prediction Ensemble approaches for improving HLA Class I-peptide binding prediction Ensemble approaches for improving HLA Class I-peptide binding prediction JOURNAL OF IMMUNOLOGICAL METHODS, 374, 1-2, 47-52 JOURNAL OF IMMUNOLOGICAL METHODS, 374, 1-2, 47-52 JOURNAL OF IMMUNOLOGICAL METHODS, 374, 1-2, 47-52 2011/11 有 英語 研究論文(学術雑誌) 公開
Motoki Shiga, Hiroshi Mamitsuka Motoki Shiga, Hiroshi Mamitsuka Motoki Shiga, Hiroshi Mamitsuka Clustering genes with expression and beyond Clustering genes with expression and beyond Clustering genes with expression and beyond WILEY INTERDISCIPLINARY REVIEWS-DATA MINING AND KNOWLEDGE DISCOVERY, 1, 6, 496-511 WILEY INTERDISCIPLINARY REVIEWS-DATA MINING AND KNOWLEDGE DISCOVERY, 1, 6, 496-511 WILEY INTERDISCIPLINARY REVIEWS-DATA MINING AND KNOWLEDGE DISCOVERY, 1, 6, 496-511 2011/11 有 英語 研究論文(学術雑誌) 公開
Canh Hao Nguyen, Hiroshi Mamitsuka Canh Hao Nguyen, Hiroshi Mamitsuka Canh Hao Nguyen, Hiroshi Mamitsuka Discriminative Graph Embedding for Label Propagation Discriminative Graph Embedding for Label Propagation Discriminative Graph Embedding for Label Propagation IEEE TRANSACTIONS ON NEURAL NETWORKS, 22, 9, 1395-1405 IEEE TRANSACTIONS ON NEURAL NETWORKS, 22, 9, 1395-1405 IEEE TRANSACTIONS ON NEURAL NETWORKS, 22, 9, 1395-1405 2011/09 有 英語 研究論文(学術雑誌) 公開
瀧川 一学, 馬見塚 拓 瀧川 一学, 馬見塚 拓 化学とグラフアルゴリズム 化学とグラフアルゴリズム 化学と教育, 59, 9, 450-453 化学と教育, 59, 9, 450-453 , 59, 9, 450-453 2011/09 有 日本語 研究論文(学術雑誌) 公開
Yayoi Natsume-Kitatani, Motoki Shiga, Hiroshi Mamitsuka Yayoi Natsume-Kitatani, Motoki Shiga, Hiroshi Mamitsuka Yayoi Natsume-Kitatani, Motoki Shiga, Hiroshi Mamitsuka Genome-Wide Integration on Transcription Factors, Histone Acetylation and Gene Expression Reveals Genes Co-Regulated by Histone Modification Patterns Genome-Wide Integration on Transcription Factors, Histone Acetylation and Gene Expression Reveals Genes Co-Regulated by Histone Modification Patterns Genome-Wide Integration on Transcription Factors, Histone Acetylation and Gene Expression Reveals Genes Co-Regulated by Histone Modification Patterns PLOS ONE, 6, 7, e22281 PLOS ONE, 6, 7, e22281 PLOS ONE, 6, 7, e22281 2011/07 有 英語 研究論文(学術雑誌) 公開
Mitsunori Kayano, Ichigaku Takigawa, Motoki Shiga, Koji Tsuda, Hiroshi Mamitsuka Mitsunori Kayano, Ichigaku Takigawa, Motoki Shiga, Koji Tsuda, Hiroshi Mamitsuka Mitsunori Kayano, Ichigaku Takigawa, Motoki Shiga, Koji Tsuda, Hiroshi Mamitsuka ROS-DET: robust detector of switching mechanisms in gene expression ROS-DET: robust detector of switching mechanisms in gene expression ROS-DET: robust detector of switching mechanisms in gene expression NUCLEIC ACIDS RESEARCH, 39, 11, e74 NUCLEIC ACIDS RESEARCH, 39, 11, e74 NUCLEIC ACIDS RESEARCH, 39, 11, e74 2011/06 有 英語 研究論文(学術雑誌) 公開
David A. duVerle, Yasuko Ono, Hiroyuki Sorimachi, Hiroshi Mamitsuka David A. duVerle, Yasuko Ono, Hiroyuki Sorimachi, Hiroshi Mamitsuka David A. duVerle, Yasuko Ono, Hiroyuki Sorimachi, Hiroshi Mamitsuka Calpain Cleavage Prediction Using Multiple Kernel Learning Calpain Cleavage Prediction Using Multiple Kernel Learning Calpain Cleavage Prediction Using Multiple Kernel Learning PLOS ONE, 6, 5, e19035 PLOS ONE, 6, 5, e19035 PLOS ONE, 6, 5, e19035 2011/05 有 英語 研究論文(学術雑誌) 公開
Ichigaku Takigawa, Koji Tsuda, Hiroshi Mamitsuka Ichigaku Takigawa, Koji Tsuda, Hiroshi Mamitsuka Ichigaku Takigawa, Koji Tsuda, Hiroshi Mamitsuka Mining Significant Substructure Pairs for Interpreting Polypharmacology in Drug-Target Network Mining Significant Substructure Pairs for Interpreting Polypharmacology in Drug-Target Network Mining Significant Substructure Pairs for Interpreting Polypharmacology in Drug-Target Network PLOS ONE, 6, 2, e16999 PLOS ONE, 6, 2, e16999 PLOS ONE, 6, 2, e16999 2011/02 有 英語 研究論文(学術雑誌) 公開
Ichigaku Takigawa, Hiroshi Mamitsuka Ichigaku Takigawa, Hiroshi Mamitsuka Ichigaku Takigawa, Hiroshi Mamitsuka Efficiently mining delta-tolerance closed frequent subgraphs Efficiently mining delta-tolerance closed frequent subgraphs Efficiently mining delta-tolerance closed frequent subgraphs MACHINE LEARNING, 82, 2, 95-121 MACHINE LEARNING, 82, 2, 95-121 MACHINE LEARNING, 82, 2, 95-121 2011/02 有 英語 研究論文(学術雑誌) 公開
Motoki Shiga, Ichigaku Takigawa, Hiroshi Mamitsuka Motoki Shiga, Ichigaku Takigawa, Hiroshi Mamitsuka Motoki Shiga, Ichigaku Takigawa, Hiroshi Mamitsuka A spectral approach to clustering numerical vectors as nodes in a network A spectral approach to clustering numerical vectors as nodes in a network A spectral approach to clustering numerical vectors as nodes in a network PATTERN RECOGNITION, 44, 2, 236-251 PATTERN RECOGNITION, 44, 2, 236-251 PATTERN RECOGNITION, 44, 2, 236-251 2011/02 有 英語 研究論文(学術雑誌) 公開
Canh Hao Nguyen, Hiroshi Mamitsuka Canh Hao Nguyen, Hiroshi Mamitsuka Canh Hao Nguyen, Hiroshi Mamitsuka Kernels for Link Prediction with Latent Feature Models Kernels for Link Prediction with Latent Feature Models Kernels for Link Prediction with Latent Feature Models MACHINE LEARNING AND KNOWLEDGE DISCOVERY IN DATABASES, PT II, 6912, II, 517-532 MACHINE LEARNING AND KNOWLEDGE DISCOVERY IN DATABASES, PT II, 6912, II, 517-532 MACHINE LEARNING AND KNOWLEDGE DISCOVERY IN DATABASES, PT II, 6912, II, 517-532 2011 有 英語 研究論文(国際会議プロシーディングス) 公開
Hiroshi Mamitsuka Hiroshi Mamitsuka Hiroshi Mamitsuka Glycoinformatics: Data Mining-based Approaches Glycoinformatics: Data Mining-based Approaches Glycoinformatics: Data Mining-based Approaches CHIMIA, 65, 1-2, 10-13 CHIMIA, 65, 1-2, 10-13 CHIMIA, 65, 1-2, 10-13 2011 英語 研究論文(学術雑誌) 公開
Takigawa, I, Hashimoto, K, Shiga, M, Kanehisa, M, Mamitsuka, H Takigawa, I, Hashimoto, K, Shiga, M, Kanehisa, M, Mamitsuka, H Takigawa, I, Hashimoto, K, Shiga, M, Kanehisa, M, Mamitsuka, H Mining Patterns from Glycan Structures. Mining Patterns from Glycan Structures. Mining Patterns from Glycan Structures. Proceedings of the International Beilstein Symposium on Glyco-Bioinformatics, 13-24 Proceedings of the International Beilstein Symposium on Glyco-Bioinformatics, 13-24 Proceedings of the International Beilstein Symposium on Glyco-Bioinformatics, 13-24 2010/12 英語 研究論文(国際会議プロシーディングス) 公開
Limin Li, Waiki Ching, Yatming Chan, Hiroshi Mamitsuka Limin Li, Waiki Ching, Yatming Chan, Hiroshi Mamitsuka Limin Li, Waiki Ching, Yatming Chan, Hiroshi Mamitsuka On network-based kernel methods for protein-protein interactions with applications in protein functions prediction On network-based kernel methods for protein-protein interactions with applications in protein functions prediction On network-based kernel methods for protein-protein interactions with applications in protein functions prediction JOURNAL OF SYSTEMS SCIENCE & COMPLEXITY, 23, 5, 917-930 JOURNAL OF SYSTEMS SCIENCE & COMPLEXITY, 23, 5, 917-930 JOURNAL OF SYSTEMS SCIENCE & COMPLEXITY, 23, 5, 917-930 2010/10 有 英語 研究論文(学術雑誌) 公開
Timothy Hancock, Ichigaku Takigawa, Hiroshi Mamitsuka Timothy Hancock, Ichigaku Takigawa, Hiroshi Mamitsuka Timothy Hancock, Ichigaku Takigawa, Hiroshi Mamitsuka Mining metabolic pathways through gene expression Mining metabolic pathways through gene expression Mining metabolic pathways through gene expression BIOINFORMATICS, 26, 17, 2128-2135 BIOINFORMATICS, 26, 17, 2128-2135 BIOINFORMATICS, 26, 17, 2128-2135 2010/09 有 英語 研究論文(学術雑誌) 公開
Xihao Hu, Wenjian Zhou, Keiko Udaka, Hiroshi Mamitsuka, Shanfeng Zhu Xihao Hu, Wenjian Zhou, Keiko Udaka, Hiroshi Mamitsuka, Shanfeng Zhu Xihao Hu, Wenjian Zhou, Keiko Udaka, Hiroshi Mamitsuka, Shanfeng Zhu MetaMHC: a meta approach to predict peptides binding to MHC molecules MetaMHC: a meta approach to predict peptides binding to MHC molecules MetaMHC: a meta approach to predict peptides binding to MHC molecules NUCLEIC ACIDS RESEARCH, 38, W474-W479 NUCLEIC ACIDS RESEARCH, 38, W474-W479 NUCLEIC ACIDS RESEARCH, 38, W474-W479 2010/07 有 英語 研究論文(学術雑誌) 公開
Kayano, M, Takigawa, I, Shiga, M, Tsuda, K, Mamitsuka, H Kayano, M, Takigawa, I, Shiga, M, Tsuda, K, Mamitsuka, H Kayano, M, Takigawa, I, Shiga, M, Tsuda, K, Mamitsuka, H On the Performance of Methods for Finding a Switching Mechanism in Gene Expression. On the Performance of Methods for Finding a Switching Mechanism in Gene Expression. On the Performance of Methods for Finding a Switching Mechanism in Gene Expression. Genome Informatics (Proceedings of the Tenth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2010)), 24, 69-83 Genome Informatics (Proceedings of the Tenth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2010)), 24, 69-83 Genome Informatics (Proceedings of the Tenth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2010)), 24, 69-83 2010/07 有 英語 研究論文(国際会議プロシーディングス) 公開
Hancock, T, Mamitsuka, H Hancock, T, Mamitsuka, H Hancock, T, Mamitsuka, H Boosted Optimization for Network Classification. Boosted Optimization for Network Classification. Boosted Optimization for Network Classification. JMLR Workshop and Conference Proceedings (Proceedings of the Thirteenth International Conference on Artificial Intelligence and Statistics (AISTATS 2010)), 9, 305-312 JMLR Workshop and Conference Proceedings (Proceedings of the Thirteenth International Conference on Artificial Intelligence and Statistics (AISTATS 2010)), 9, 305-312 JMLR Workshop and Conference Proceedings (Proceedings of the Thirteenth International Conference on Artificial Intelligence and Statistics (AISTATS 2010)), 9, 305-312 2010/05 有 英語 研究論文(国際会議プロシーディングス) 公開
Tze Hau Lam, Hiroshi Mamitsuka, Ee Chee Ren, Joo Chuan Tong Tze Hau Lam, Hiroshi Mamitsuka, Ee Chee Ren, Joo Chuan Tong Tze Hau Lam, Hiroshi Mamitsuka, Ee Chee Ren, Joo Chuan Tong TAP Hunter: A SVM-based system for predicting TAP ligands using local description of amino acid sequence TAP Hunter: A SVM-based system for predicting TAP ligands using local description of amino acid sequence TAP Hunter: A SVM-based system for predicting TAP ligands using local description of amino acid sequence Immunome Research, 6, 1, S6 Immunome Research, 6, 1, S6 Immunome Research, 6, 1, S6 2010 有 英語 研究論文(国際会議プロシーディングス) 公開
Atsuyoshi Nakamura, Tomoya Saito, Ichigaku Takigawa, Hiroshi Mamitsuka, Mineichi Kudo Atsuyoshi Nakamura, Tomoya Saito, Ichigaku Takigawa, Hiroshi Mamitsuka, Mineichi Kudo Atsuyoshi Nakamura, Tomoya Saito, Ichigaku Takigawa, Hiroshi Mamitsuka, Mineichi Kudo Algorithms for finding a minimum repetition representation of a string Algorithms for finding a minimum repetition representation of a string Algorithms for finding a minimum repetition representation of a string Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 6393, 185-190 Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 6393, 185-190 Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 6393, 185-190 2010 有 英語 研究論文(国際会議プロシーディングス) 公開
Timothy Hancock, Hiroshi Mamitsuka Timothy Hancock, Hiroshi Mamitsuka Timothy Hancock, Hiroshi Mamitsuka A markov classification model for metabolic pathways A markov classification model for metabolic pathways A markov classification model for metabolic pathways ALGORITHMS FOR MOLECULAR BIOLOGY, 5, 1, 10 ALGORITHMS FOR MOLECULAR BIOLOGY, 5, 1, 10 ALGORITHMS FOR MOLECULAR BIOLOGY, 5, 1, 10 2010/01 有 英語 研究論文(学術雑誌) 公開
Motoki Shiga, Hiroshi Mamitsuka Motoki Shiga, Hiroshi Mamitsuka Motoki Shiga, Hiroshi Mamitsuka Variational Bayes learning over multiple graphs Variational Bayes learning over multiple graphs Variational Bayes learning over multiple graphs Proceedings of the 2010 IEEE International Workshop on Machine Learning for Signal Processing, MLSP 2010, 166-171 Proceedings of the 2010 IEEE International Workshop on Machine Learning for Signal Processing, MLSP 2010, 166-171 Proceedings of the 2010 IEEE International Workshop on Machine Learning for Signal Processing, MLSP 2010, 166-171 2010 有 英語 研究論文(国際会議プロシーディングス) 公開
Raymond Wan, Larisa Kiseleva, Hajime Harada, Hiroshi Mamitsuka, Paul Horton Raymond Wan, Larisa Kiseleva, Hajime Harada, Hiroshi Mamitsuka, Paul Horton Raymond Wan, Larisa Kiseleva, Hajime Harada, Hiroshi Mamitsuka, Paul Horton HAMSTER: Visualizing microarray experiments as a set of minimum spanning trees HAMSTER: Visualizing microarray experiments as a set of minimum spanning trees HAMSTER: Visualizing microarray experiments as a set of minimum spanning trees Source Code for Biology and Medicine, 4, 1, Article 8 Source Code for Biology and Medicine, 4, 1, Article 8 Source Code for Biology and Medicine, 4, 1, Article 8 2009/11/20 有 英語 研究論文(学術雑誌) 公開
Mitsunori Kayano, Ichigaku Takigawa, Motoki Shiga, Koji Tsuda, Hiroshi Mamitsuka Mitsunori Kayano, Ichigaku Takigawa, Motoki Shiga, Koji Tsuda, Hiroshi Mamitsuka Mitsunori Kayano, Ichigaku Takigawa, Motoki Shiga, Koji Tsuda, Hiroshi Mamitsuka Efficiently finding genome-wide three-way gene interactions from transcript- and genotype-data Efficiently finding genome-wide three-way gene interactions from transcript- and genotype-data Efficiently finding genome-wide three-way gene interactions from transcript- and genotype-data BIOINFORMATICS, 25, 21, 2735-2743 BIOINFORMATICS, 25, 21, 2735-2743 BIOINFORMATICS, 25, 21, 2735-2743 2009/11 有 英語 研究論文(学術雑誌) 公開
Wan, R, Vo, A. N, Mamitsuka, H Wan, R, Vo, A. N, Mamitsuka, H Wan, R, Vo, A. N, Mamitsuka, H Efficient Probabilistic Latent Semantic Analysis Through Parallelization. Efficient Probabilistic Latent Semantic Analysis Through Parallelization. Efficient Probabilistic Latent Semantic Analysis Through Parallelization. Lecture Notes in Computer Science (Proceedings of the Fifth Asian Information Retrieval Symposium (AIRS 2009)), 5839, 432-443 Lecture Notes in Computer Science (Proceedings of the Fifth Asian Information Retrieval Symposium (AIRS 2009)), 5839, 432-443 Lecture Notes in Computer Science (Proceedings of the Fifth Asian Information Retrieval Symposium (AIRS 2009)), 5839, 432-443 2009/10 有 英語 研究論文(国際会議プロシーディングス) 公開
Shanfeng Zhu, Ichigaku Takigawa, Jia Zeng, Hiroshi Mamitsuka Shanfeng Zhu, Ichigaku Takigawa, Jia Zeng, Hiroshi Mamitsuka Shanfeng Zhu, Ichigaku Takigawa, Jia Zeng, Hiroshi Mamitsuka Field independent probabilistic model for clustering multi-field documents Field independent probabilistic model for clustering multi-field documents Field independent probabilistic model for clustering multi-field documents INFORMATION PROCESSING & MANAGEMENT, 45, 5, 555-570 INFORMATION PROCESSING & MANAGEMENT, 45, 5, 555-570 INFORMATION PROCESSING & MANAGEMENT, 45, 5, 555-570 2009/09 有 英語 研究論文(学術雑誌) 公開
Shanfeng Zhu, Jia Zeng, Hiroshi Mamitsuka Shanfeng Zhu, Jia Zeng, Hiroshi Mamitsuka Shanfeng Zhu, Jia Zeng, Hiroshi Mamitsuka Enhancing MEDLINE document clustering by incorporating MeSH semantic similarity Enhancing MEDLINE document clustering by incorporating MeSH semantic similarity Enhancing MEDLINE document clustering by incorporating MeSH semantic similarity BIOINFORMATICS, 25, 15, 1944-1951 BIOINFORMATICS, 25, 15, 1944-1951 BIOINFORMATICS, 25, 15, 1944-1951 2009/08 有 英語 研究論文(学術雑誌) 公開
Li, L, Shiga, M, Ching, W.-K, Mamitsuka, H Li, L, Shiga, M, Ching, W.-K, Mamitsuka, H Li, L, Shiga, M, Ching, W.-K, Mamitsuka, H Annotating Gene Functions with Integrative Spectral Clustering on Microarray Expressions and Sequences. Annotating Gene Functions with Integrative Spectral Clustering on Microarray Expressions and Sequences. Annotating Gene Functions with Integrative Spectral Clustering on Microarray Expressions and Sequences. Genome Informatics (Proceedings of the Ninth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2009)), 22, 95-120 Genome Informatics (Proceedings of the Ninth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2009)), 22, 95-120 Genome Informatics (Proceedings of the Ninth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2009)), 22, 95-120 2009/07 英語 研究論文(国際会議プロシーディングス) 公開
duVerle, D. A, Takigawa, I, Ono, Y, Sorimachi, H, Mamitsuka, H duVerle, D. A, Takigawa, I, Ono, Y, Sorimachi, H, Mamitsuka, H duVerle, D. A, Takigawa, I, Ono, Y, Sorimachi, H, Mamitsuka, H CaMPDB: a Resource for Calpain and Modulatory Proteolysis. CaMPDB: a Resource for Calpain and Modulatory Proteolysis. CaMPDB: a Resource for Calpain and Modulatory Proteolysis. Genome Informatics (Proceedings of the Ninth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2009)), 22, 202-214 Genome Informatics (Proceedings of the Ninth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2009)), 22, 202-214 Genome Informatics (Proceedings of the Ninth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2009)), 22, 202-214 2009/07 英語 研究論文(国際会議プロシーディングス) 公開
Hancock, T, Mamitsuka, H Hancock, T, Mamitsuka, H Hancock, T, Mamitsuka, H Active Pathway Identification and Classification with Probabilistic Ensembles. Active Pathway Identification and Classification with Probabilistic Ensembles. Active Pathway Identification and Classification with Probabilistic Ensembles. Genome Informatics (Proceedings of the Ninth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2009)), 22, 30-40 Genome Informatics (Proceedings of the Ninth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2009)), 22, 30-40 Genome Informatics (Proceedings of the Ninth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2009)), 22, 30-40 2009/07 英語 研究論文(国際会議プロシーディングス) 公開
Timothy Hancock, Hiroshi Mamitsuka Timothy Hancock, Hiroshi Mamitsuka Timothy Hancock, Hiroshi Mamitsuka A Markov Classification Model for Metabolic Pathways A Markov Classification Model for Metabolic Pathways A Markov Classification Model for Metabolic Pathways ALGORITHMS IN BIOINFORMATICS, PROCEEDINGS, 5724, 121-132 ALGORITHMS IN BIOINFORMATICS, PROCEEDINGS, 5724, 121-132 ALGORITHMS IN BIOINFORMATICS, PROCEEDINGS, 5724, 121-132 2009 有 英語 研究論文(国際会議プロシーディングス) 公開
Raymond Wan, Hiroshi Mamitsuka Raymond Wan, Hiroshi Mamitsuka Raymond Wan, Hiroshi Mamitsuka Discovering network motifs in protein interaction networks Discovering network motifs in protein interaction networks Discovering network motifs in protein interaction networks Biological Data Mining in Protein Interaction Networks, 117-143 Biological Data Mining in Protein Interaction Networks, 117-143 Biological Data Mining in Protein Interaction Networks, 117-143 2009 有 英語 公開
Wai-Ki Ching, Limin Li, Yat-Ming Chan, Hiroshi Mamitsuka Wai-Ki Ching, Limin Li, Yat-Ming Chan, Hiroshi Mamitsuka Wai-Ki Ching, Limin Li, Yat-Ming Chan, Hiroshi Mamitsuka A Study of Network-based Kernel Methods on Protein-Protein Interaction for Protein Functions Prediction A Study of Network-based Kernel Methods on Protein-Protein Interaction for Protein Functions Prediction A Study of Network-based Kernel Methods on Protein-Protein Interaction for Protein Functions Prediction OPTIMIZATION AND SYSTEMS BIOLOGY, 11, 25-+ OPTIMIZATION AND SYSTEMS BIOLOGY, 11, 25-+ OPTIMIZATION AND SYSTEMS BIOLOGY, 11, 25-+ 2009 有 英語 研究論文(国際会議プロシーディングス) 公開
Kosuke Hashimoto, Ichigaku Takigawa, Motoki Shiga, Minoru Kanehisa, Hiroshi Mamitsuka Kosuke Hashimoto, Ichigaku Takigawa, Motoki Shiga, Minoru Kanehisa, Hiroshi Mamitsuka Kosuke Hashimoto, Ichigaku Takigawa, Motoki Shiga, Minoru Kanehisa, Hiroshi Mamitsuka Mining significant tree patterns in carbohydrate sugar chains Mining significant tree patterns in carbohydrate sugar chains Mining significant tree patterns in carbohydrate sugar chains BIOINFORMATICS, 24, 16, I167-I173 BIOINFORMATICS, 24, 16, I167-I173 BIOINFORMATICS, 24, 16, I167-I173 2008/08 有 英語 研究論文(学術雑誌) 公開
Wan, R. Wheelock, A, Mamitsuka, H Wan, R. Wheelock, A, Mamitsuka, H Wan, R. Wheelock, A, Mamitsuka, H A Framework for Determining Outlying Microarray Experiments. A Framework for Determining Outlying Microarray Experiments. A Framework for Determining Outlying Microarray Experiments. Genome Informatics (Proceedings of the Eighth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2008)), 20, 64-76 Genome Informatics (Proceedings of the Eighth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2008)), 20, 64-76 Genome Informatics (Proceedings of the Eighth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2008)), 20, 64-76 2008/06 英語 研究論文(国際会議プロシーディングス) 公開
Hancock, T, Mamitsuka, H Hancock, T, Mamitsuka, H Hancock, T, Mamitsuka, H Semi-Supervised Graph Partitioning with Decision Trees. Semi-Supervised Graph Partitioning with Decision Trees. Semi-Supervised Graph Partitioning with Decision Trees. Genome Informatics (Proceedings of the Eighth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2008)), 20, 102-111 Genome Informatics (Proceedings of the Eighth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2008)), 20, 102-111 Genome Informatics (Proceedings of the Eighth Annual Workshop on Bioinformatics and Systems Biology (IBSB 2008)), 20, 102-111 2008/06 英語 研究論文(国際会議プロシーディングス) 公開
志賀 元紀, 瀧川 一学, 馬見塚 拓 志賀 元紀, 瀧川 一学, 馬見塚 拓 多様なゲノムデータの統合的クラスタリング解析(理論/実験技術) 多様なゲノムデータの統合的クラスタリング解析(理論/実験技術) 生物物理, 48, 3, 190-194 生物物理, 48, 3, 190-194 , 48, 3, 190-194 2008/05 有 日本語 研究論文(学術雑誌) 公開
馬見塚 拓, 米屋 隆 馬見塚 拓, 米屋 隆 PURE:PubMed文献検索支援システム PURE:PubMed文献検索支援システム 実験医学, 26, 7, 1167-1172 実験医学, 26, 7, 1167-1172 , 26, 7, 1167-1172 2008/05 日本語 研究論文(学術雑誌) 公開
Kosuke Hashimoto, Kiyoko Flora Aoki-Kinoshita, Nobuhisa Ueda, Minoru Kanehisa, Hiroshi Mamitsuka Kosuke Hashimoto, Kiyoko Flora Aoki-Kinoshita, Nobuhisa Ueda, Minoru Kanehisa, Hiroshi Mamitsuka Kosuke Hashimoto, Kiyoko Flora Aoki-Kinoshita, Nobuhisa Ueda, Minoru Kanehisa, Hiroshi Mamitsuka A new efficient probabilistic model for mining labeled ordered trees applied to glycobiology A new efficient probabilistic model for mining labeled ordered trees applied to glycobiology A new efficient probabilistic model for mining labeled ordered trees applied to glycobiology ACM Transactions on Knowledge Discovery from Data, 2, 1, Article No. 6 ACM Transactions on Knowledge Discovery from Data, 2, 1, Article No. 6 ACM Transactions on Knowledge Discovery from Data, 2, 1, Article No. 6 2008/03/01 有 英語 研究論文(学術雑誌) 公開
Hiroshi Mamitsuka Hiroshi Mamitsuka Hiroshi Mamitsuka Informatic innovations in glycobiology: relevance to drug discovery Informatic innovations in glycobiology: relevance to drug discovery Informatic innovations in glycobiology: relevance to drug discovery DRUG DISCOVERY TODAY, 13, 3-4, 118-123 DRUG DISCOVERY TODAY, 13, 3-4, 118-123 DRUG DISCOVERY TODAY, 13, 3-4, 118-123 2008/02 有 英語 研究論文(学術雑誌) 公開
Ichigaku Takigawa, Hiroshi Mamitsuka Ichigaku Takigawa, Hiroshi Mamitsuka Ichigaku Takigawa, Hiroshi Mamitsuka Probabilistic path ranking based on adjacent pairwise coexpression for metabolic transcripts analysis Probabilistic path ranking based on adjacent pairwise coexpression for metabolic transcripts analysis Probabilistic path ranking based on adjacent pairwise coexpression for metabolic transcripts analysis BIOINFORMATICS, 24, 2, 250-257 BIOINFORMATICS, 24, 2, 250-257 BIOINFORMATICS, 24, 2, 250-257 2008/01 有 英語 研究論文(学術雑誌) 公開
Tadashi Kadowaki, Craig E. Wheelock, Tetsuya Adachi, Taku Kudo, Shinobu Okamoto, Nobuya Tanaka, Koichiro Tonomura, Gozoh Tsujimoto, Hiroshi Mamitsuka, Susumu Goto, Minoru Kanehisa Tadashi Kadowaki, Craig E. Wheelock, Tetsuya Adachi, Taku Kudo, Shinobu Okamoto, Nobuya Tanaka, Koichiro Tonomura, Gozoh Tsujimoto, Hiroshi Mamitsuka, Susumu Goto, Minoru Kanehisa Tadashi Kadowaki, Craig E. Wheelock, Tetsuya Adachi, Taku Kudo, Shinobu Okamoto, Nobuya Tanaka, Koichiro Tonomura, Gozoh Tsujimoto, Hiroshi Mamitsuka, Susumu Goto, Minoru Kanehisa Identification of endocrine disruptor biodegradation by integration of structure-activity relationship with pathway analysis Identification of endocrine disruptor biodegradation by integration of structure-activity relationship with pathway analysis Identification of endocrine disruptor biodegradation by integration of structure-activity relationship with pathway analysis ENVIRONMENTAL SCIENCE & TECHNOLOGY, 41, 23, 7997-8003 ENVIRONMENTAL SCIENCE & TECHNOLOGY, 41, 23, 7997-8003 ENVIRONMENTAL SCIENCE & TECHNOLOGY, 41, 23, 7997-8003 2007/12 有 英語 研究論文(学術雑誌) 公開
Hiroshi Mamitsuka, Naoki Abe Hiroshi Mamitsuka, Naoki Abe Hiroshi Mamitsuka, Naoki Abe Active ensemble learning: Application to data mining and bioinformatics Active ensemble learning: Application to data mining and bioinformatics Active ensemble learning: Application to data mining and bioinformatics Systems and Computers in Japan, 38, 11, 100-108 Systems and Computers in Japan, 38, 11, 100-108 Systems and Computers in Japan, 38, 11, 100-108 2007/10 有 英語 研究論文(学術雑誌) 公開
Motoki Shiga, Ichigaku Takigawa, Hiroshi Mamitsuka Motoki Shiga, Ichigaku Takigawa, Hiroshi Mamitsuka Motoki Shiga, Ichigaku Takigawa, Hiroshi Mamitsuka Annotating gene function by combining expression data with a modular gene network Annotating gene function by combining expression data with a modular gene network Annotating gene function by combining expression data with a modular gene network BIOINFORMATICS, 23, 13, I468-I478 BIOINFORMATICS, 23, 13, I468-I478 BIOINFORMATICS, 23, 13, I468-I478 2007/07 有 英語 研究論文(学術雑誌) 公開
Takashi Yoneya, Hiroshi Mamitsuka Takashi Yoneya, Hiroshi Mamitsuka Takashi Yoneya, Hiroshi Mamitsuka A hidden Markov model-based approach for identifying timing differences in gene expression under different experimental factors A hidden Markov model-based approach for identifying timing differences in gene expression under different experimental factors A hidden Markov model-based approach for identifying timing differences in gene expression under different experimental factors BIOINFORMATICS, 23, 7, 842-849 BIOINFORMATICS, 23, 7, 842-849 BIOINFORMATICS, 23, 7, 842-849 2007/04 有 英語 研究論文(学術雑誌) 公開
Zhu, S, Takigawa, I, Zhang, S, Mamitsuka, H Zhu, S, Takigawa, I, Zhang, S, Mamitsuka, H Zhu, S, Takigawa, I, Zhang, S, Mamitsuka, H A Probabilistic Model for Clustering Text Documents with Multiple Fields. A Probabilistic Model for Clustering Text Documents with Multiple Fields. A Probabilistic Model for Clustering Text Documents with Multiple Fields. Lecture Notes in Computer Science (Proceedings of the Twenty-Ninth European Conference on Information Retrieval (ECIR 2007)), 4425, 331-342 Lecture Notes in Computer Science (Proceedings of the Twenty-Ninth European Conference on Information Retrieval (ECIR 2007)), 4425, 331-342 Lecture Notes in Computer Science (Proceedings of the Twenty-Ninth European Conference on Information Retrieval (ECIR 2007)), 4425, 331-342 2007/04 有 英語 研究論文(国際会議プロシーディングス) 公開
Takashi Yoneya, Hiroshi Mamitsuka Takashi Yoneya, Hiroshi Mamitsuka Takashi Yoneya, Hiroshi Mamitsuka Pure: A Pubmed Article Recommendation System Based On Content-Based Filtering Pure: A Pubmed Article Recommendation System Based On Content-Based Filtering Pure: A Pubmed Article Recommendation System Based On Content-Based Filtering GENOME INFORMATICS 2007, VOL 18, 18, 267-276 GENOME INFORMATICS 2007, VOL 18, 18, 267-276 GENOME INFORMATICS 2007, VOL 18, 18, 267-276 2007 有 英語 研究論文(国際会議プロシーディングス) 公開
Motoki Shiga, Ichigaku Takigawa, Hiroshi Mamitsuka Motoki Shiga, Ichigaku Takigawa, Hiroshi Mamitsuka Motoki Shiga, Ichigaku Takigawa, Hiroshi Mamitsuka A Spectral Clustering Approach to Optimally Combining Numerical Vectors with a Modular Network A Spectral Clustering Approach to Optimally Combining Numerical Vectors with a Modular Network A Spectral Clustering Approach to Optimally Combining Numerical Vectors with a Modular Network KDD-2007 PROCEEDINGS OF THE THIRTEENTH ACM SIGKDD INTERNATIONAL CONFERENCE ON KNOWLEDGE DISCOVERY AND DATA MINING, 647-656 KDD-2007 PROCEEDINGS OF THE THIRTEENTH ACM SIGKDD INTERNATIONAL CONFERENCE ON KNOWLEDGE DISCOVERY AND DATA MINING, 647-656 KDD-2007 PROCEEDINGS OF THE THIRTEENTH ACM SIGKDD INTERNATIONAL CONFERENCE ON KNOWLEDGE DISCOVERY AND DATA MINING, 647-656 2007 有 英語 研究論文(国際会議プロシーディングス) 公開
Hiroshi Mamitsuka Hiroshi Mamitsuka Hiroshi Mamitsuka Selecting features in microarray classification using ROC curves Selecting features in microarray classification using ROC curves Selecting features in microarray classification using ROC curves PATTERN RECOGNITION, 39, 12, 2393-2404 PATTERN RECOGNITION, 39, 12, 2393-2404 PATTERN RECOGNITION, 39, 12, 2393-2404 2006/12 有 英語 研究論文(学術雑誌) 公開
Wan, R, Takigawa, I, Mamitsuka, H Wan, R, Takigawa, I, Mamitsuka, H Wan, R, Takigawa, I, Mamitsuka, H Applying Gaussian Distribution-dependent Criteria to Decision Trees for High-Dimensional Microarray Data. Applying Gaussian Distribution-dependent Criteria to Decision Trees for High-Dimensional Microarray Data. Applying Gaussian Distribution-dependent Criteria to Decision Trees for High-Dimensional Microarray Data. Lecture Notes in Computer Science (Proceedings of 2006 VLDB Workshop on Data Mining in Bioinformatics), 4316, 40-49 Lecture Notes in Computer Science (Proceedings of 2006 VLDB Workshop on Data Mining in Bioinformatics), 4316, 40-49 Lecture Notes in Computer Science (Proceedings of 2006 VLDB Workshop on Data Mining in Bioinformatics), 4316, 40-49 2006/09 有 英語 研究論文(国際会議プロシーディングス) 公開
Hashimoto, K, Aoki-Kinoshita, K. F, Ueda, N, Kanehisa, M, Mamitsuka, H Hashimoto, K, Aoki-Kinoshita, K. F, Ueda, N, Kanehisa, M, Mamitsuka, H Hashimoto, K, Aoki-Kinoshita, K. F, Ueda, N, Kanehisa, M, Mamitsuka, H A New Efficient Probabilistic Model for Mining Labeled Ordered Trees. A New Efficient Probabilistic Model for Mining Labeled Ordered Trees. A New Efficient Probabilistic Model for Mining Labeled Ordered Trees. Proceedings of the Twelfth ACM SIGKDD International Conference On Knowledge Discovery and Data Mining (KDD 2006), 177-186 Proceedings of the Twelfth ACM SIGKDD International Conference On Knowledge Discovery and Data Mining (KDD 2006), 177-186 Proceedings of the Twelfth ACM SIGKDD International Conference On Knowledge Discovery and Data Mining (KDD 2006), 177-186 2006/08 有 英語 研究論文(国際会議プロシーディングス) 公開
Shanfeng Zhu, Keiko Udaka, John Sidney, Alessandro Sette, Kiyoko F. Aoki-Kinoshita, Hiroshi Mamitsuka Shanfeng Zhu, Keiko Udaka, John Sidney, Alessandro Sette, Kiyoko F. Aoki-Kinoshita, Hiroshi Mamitsuka Shanfeng Zhu, Keiko Udaka, John Sidney, Alessandro Sette, Kiyoko F. Aoki-Kinoshita, Hiroshi Mamitsuka Improving MHC binding peptide prediction by incorporating binding data of auxiliary MHC molecules Improving MHC binding peptide prediction by incorporating binding data of auxiliary MHC molecules Improving MHC binding peptide prediction by incorporating binding data of auxiliary MHC molecules BIOINFORMATICS, 22, 13, 1648-1655 BIOINFORMATICS, 22, 13, 1648-1655 BIOINFORMATICS, 22, 13, 1648-1655 2006/07 有 英語 研究論文(学術雑誌) 公開
Kiyoko F. Aoki-Kinoshita, Nobuhisa Ueda, Hiroshi Mamitsuka, Minoru Kanehisa Kiyoko F. Aoki-Kinoshita, Nobuhisa Ueda, Hiroshi Mamitsuka, Minoru Kanehisa Kiyoko F. Aoki-Kinoshita, Nobuhisa Ueda, Hiroshi Mamitsuka, Minoru Kanehisa ProfilePSTMM: capturing tree-structure motifs in carbohydrate sugar chains ProfilePSTMM: capturing tree-structure motifs in carbohydrate sugar chains ProfilePSTMM: capturing tree-structure motifs in carbohydrate sugar chains BIOINFORMATICS, 22, 14, E25-E34 BIOINFORMATICS, 22, 14, E25-E34 BIOINFORMATICS, 22, 14, E25-E34 2006/07 有 英語 研究論文(学術雑誌) 公開
H Mamitsuka H Mamitsuka H Mamitsuka Query-learning-based iterative feature-subset selection for learning from high-dimensional data sets Query-learning-based iterative feature-subset selection for learning from high-dimensional data sets Query-learning-based iterative feature-subset selection for learning from high-dimensional data sets KNOWLEDGE AND INFORMATION SYSTEMS, 9, 1, 91-108 KNOWLEDGE AND INFORMATION SYSTEMS, 9, 1, 91-108 KNOWLEDGE AND INFORMATION SYSTEMS, 9, 1, 91-108 2006/01 有 英語 研究論文(学術雑誌) 公開
Zhu, S, Okuno, Y, Tsujimoto, G, Mamitsuka, H Zhu, S, Okuno, Y, Tsujimoto, G, Mamitsuka, H Zhu, S, Okuno, Y, Tsujimoto, G, Mamitsuka, H Application of a New Probabilistic Model for Mining Implicit Associated Cancer Genes from OMIM and Medline. Application of a New Probabilistic Model for Mining Implicit Associated Cancer Genes from OMIM and Medline. Application of a New Probabilistic Model for Mining Implicit Associated Cancer Genes from OMIM and Medline. Cancer Informatics, 2, 361-371 Cancer Informatics, 2, 361-371 Cancer Informatics, 2, 361-371 2006 有 英語 公開
SF Zhu, Y Okuno, G Tsujimoto, H Mamitsuka SF Zhu, Y Okuno, G Tsujimoto, H Mamitsuka SF Zhu, Y Okuno, G Tsujimoto, H Mamitsuka A probabilistic model for mining implicit 'chemical compound-gene' relations from literature A probabilistic model for mining implicit 'chemical compound-gene' relations from literature A probabilistic model for mining implicit 'chemical compound-gene' relations from literature BIOINFORMATICS, 21, Suppl. 2, 245-251 BIOINFORMATICS, 21, Suppl. 2, 245-251 BIOINFORMATICS, 21, Suppl. 2, 245-251 2005/09 有 英語 研究論文(学術雑誌) 公開
H Mamitsuka H Mamitsuka H Mamitsuka Finding the biologically optimal alignment of multiple sequences Finding the biologically optimal alignment of multiple sequences Finding the biologically optimal alignment of multiple sequences ARTIFICIAL INTELLIGENCE IN MEDICINE, 35, 1-2, 9-18 ARTIFICIAL INTELLIGENCE IN MEDICINE, 35, 1-2, 9-18 ARTIFICIAL INTELLIGENCE IN MEDICINE, 35, 1-2, 9-18 2005/09 有 英語 研究論文(学術雑誌) 公開
KJ Cios, H Mamitsuka, T Nagashima, R Tadeusiewicz KJ Cios, H Mamitsuka, T Nagashima, R Tadeusiewicz KJ Cios, H Mamitsuka, T Nagashima, R Tadeusiewicz Computational intelligence in solving bioinformatics problems Computational intelligence in solving bioinformatics problems Computational intelligence in solving bioinformatics problems ARTIFICIAL INTELLIGENCE IN MEDICINE, 35, 1-2, 1-8 ARTIFICIAL INTELLIGENCE IN MEDICINE, 35, 1-2, 1-8 ARTIFICIAL INTELLIGENCE IN MEDICINE, 35, 1-2, 1-8 2005/09 英語 研究論文(学術雑誌) 公開
N Ueda, KF Aoki-Kinoshita, A Yamaguchi, T Akutsu, H Mamitsuka N Ueda, KF Aoki-Kinoshita, A Yamaguchi, T Akutsu, H Mamitsuka N Ueda, KF Aoki-Kinoshita, A Yamaguchi, T Akutsu, H Mamitsuka A probabilistic model for mining labeled ordered trees: Capturing patterns in carbohydrate sugar chains A probabilistic model for mining labeled ordered trees: Capturing patterns in carbohydrate sugar chains A probabilistic model for mining labeled ordered trees: Capturing patterns in carbohydrate sugar chains IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING, 17, 8, 1051-1064 IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING, 17, 8, 1051-1064 IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING, 17, 8, 1051-1064 2005/08 有 英語 研究論文(学術雑誌) 公開
H Mamitsuka H Mamitsuka H Mamitsuka Mining new protein-protein interactions Mining new protein-protein interactions Mining new protein-protein interactions IEEE ENGINEERING IN MEDICINE AND BIOLOGY MAGAZINE, 24, 3, 103-108 IEEE ENGINEERING IN MEDICINE AND BIOLOGY MAGAZINE, 24, 3, 103-108 IEEE ENGINEERING IN MEDICINE AND BIOLOGY MAGAZINE, 24, 3, 103-108 2005/05 有 英語 研究論文(学術雑誌) 公開
KF Aoki, H Mamitsuka, T Akutsu, M Kanehisa KF Aoki, H Mamitsuka, T Akutsu, M Kanehisa KF Aoki, H Mamitsuka, T Akutsu, M Kanehisa A score matrix to reveal the hidden links in glycans A score matrix to reveal the hidden links in glycans A score matrix to reveal the hidden links in glycans BIOINFORMATICS, 21, 8, 1457-1463 BIOINFORMATICS, 21, 8, 1457-1463 BIOINFORMATICS, 21, 8, 1457-1463 2005/04 有 英語 研究論文(学術雑誌) 公開
H Mamitsuka H Mamitsuka H Mamitsuka Essential latent knowledge for protein-protein interactions: Analysis by an unsupervised learning approach Essential latent knowledge for protein-protein interactions: Analysis by an unsupervised learning approach Essential latent knowledge for protein-protein interactions: Analysis by an unsupervised learning approach IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2, 2, 119-130 IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2, 2, 119-130 IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2, 2, 119-130 2005/04 有 英語 研究論文(学術雑誌) 公開
Mamitsuka, H Mamitsuka, H Mamitsuka, H Efficient Unsupervised Mining from Noisy Co-occurrence Data Efficient Unsupervised Mining from Noisy Co-occurrence Data Efficient Unsupervised Mining from Noisy Co-occurrence Data New Mathematics and Natural Computation, 1, 1, 173-193 New Mathematics and Natural Computation, 1, 1, 173-193 New Mathematics and Natural Computation, 1, 1, 173-193 2005/03 有 英語 研究論文(学術雑誌) 公開
Raymond Wan, Hiroshi Mamitsuka, Kiyoko F. Aoki Raymond Wan, Hiroshi Mamitsuka, Kiyoko F. Aoki Raymond Wan, Hiroshi Mamitsuka, Kiyoko F. Aoki Cleaning microarray exprossion data using Markov random fields based on profile similarity Cleaning microarray exprossion data using Markov random fields based on profile similarity Cleaning microarray exprossion data using Markov random fields based on profile similarity Proceedings of the ACM Symposium on Applied Computing, 1, 206-207 Proceedings of the ACM Symposium on Applied Computing, 1, 206-207 Proceedings of the ACM Symposium on Applied Computing, 1, 206-207 2005 有 英語 研究論文(国際会議プロシーディングス) 公開
Takuji Yamada, Shuichi Kawashima, Hiroshi Mamitsuka, Susumu Goto, Minoru Kanehisa Takuji Yamada, Shuichi Kawashima, Hiroshi Mamitsuka, Susumu Goto, Minoru Kanehisa Takuji Yamada, Shuichi Kawashima, Hiroshi Mamitsuka, Susumu Goto, Minoru Kanehisa Comprehensive analysis and prediction of synthetic lethality using subcellular locations. Comprehensive analysis and prediction of synthetic lethality using subcellular locations. Comprehensive analysis and prediction of synthetic lethality using subcellular locations. Genome informatics. International Conference on Genome Informatics, 16, 1, 150-8 Genome informatics. International Conference on Genome Informatics, 16, 1, 150-8 Genome informatics. International Conference on Genome Informatics, 16, 1, 150-8 2005 有 英語 研究論文(国際会議プロシーディングス) 公開
Y Igarashi, KF Aoki, H Mamitsuka, K Kuma, M Kanehisa Y Igarashi, KF Aoki, H Mamitsuka, K Kuma, M Kanehisa Y Igarashi, KF Aoki, H Mamitsuka, K Kuma, M Kanehisa The evolutionary repertoires of the eukaryotic-type ABC transporters in terms of the phylogeny of ATP-binding domains in eukaryotes and prokaryotes The evolutionary repertoires of the eukaryotic-type ABC transporters in terms of the phylogeny of ATP-binding domains in eukaryotes and prokaryotes The evolutionary repertoires of the eukaryotic-type ABC transporters in terms of the phylogeny of ATP-binding domains in eukaryotes and prokaryotes MOLECULAR BIOLOGY AND EVOLUTION, 21, 11, 2149-2160 MOLECULAR BIOLOGY AND EVOLUTION, 21, 11, 2149-2160 MOLECULAR BIOLOGY AND EVOLUTION, 21, 11, 2149-2160 2004/11 有 英語 研究論文(学術雑誌) 公開
A Yamaguchi, KF Aoki, H Mamitsuka A Yamaguchi, KF Aoki, H Mamitsuka A Yamaguchi, KF Aoki, H Mamitsuka Finding the maximum common subgraph of a partial k-tree and a graph with a polynomially bounded number of spanning trees Finding the maximum common subgraph of a partial k-tree and a graph with a polynomially bounded number of spanning trees Finding the maximum common subgraph of a partial k-tree and a graph with a polynomially bounded number of spanning trees INFORMATION PROCESSING LETTERS, 92, 2, 57-63 INFORMATION PROCESSING LETTERS, 92, 2, 57-63 INFORMATION PROCESSING LETTERS, 92, 2, 57-63 2004/10 有 英語 研究論文(学術雑誌) 公開
Kiyoko F. Aoki, Nobuhisa Ueda, Atsuko Yamaguchi, Minoru Kanehisa, Tatsuya Akutsu, Hiroshi Mamitsuka Kiyoko F. Aoki, Nobuhisa Ueda, Atsuko Yamaguchi, Minoru Kanehisa, Tatsuya Akutsu, Hiroshi Mamitsuka Kiyoko F. Aoki, Nobuhisa Ueda, Atsuko Yamaguchi, Minoru Kanehisa, Tatsuya Akutsu, Hiroshi Mamitsuka Application of a new probabilistic model for recognizing complex patterns in glycans Application of a new probabilistic model for recognizing complex patterns in glycans Application of a new probabilistic model for recognizing complex patterns in glycans BIOINFORMATICS, 20, SUPPL. 1, 6-14 BIOINFORMATICS, 20, SUPPL. 1, 6-14 BIOINFORMATICS, 20, SUPPL. 1, 6-14 2004/08 有 英語 研究論文(学術雑誌) 公開
KF Aoki, A Yamaguchi, N Ueda, T Akutsu, H Mamitsuka, S Goto, M Kanehisa KF Aoki, A Yamaguchi, N Ueda, T Akutsu, H Mamitsuka, S Goto, M Kanehisa KF Aoki, A Yamaguchi, N Ueda, T Akutsu, H Mamitsuka, S Goto, M Kanehisa KCaM (KEGG Carbohydrate Matcher): a software tool for analyzing the structures of carbohydrate sugar chains KCaM (KEGG Carbohydrate Matcher): a software tool for analyzing the structures of carbohydrate sugar chains KCaM (KEGG Carbohydrate Matcher): a software tool for analyzing the structures of carbohydrate sugar chains NUCLEIC ACIDS RESEARCH, 32, Suppl. 2, W267-W272 NUCLEIC ACIDS RESEARCH, 32, Suppl. 2, W267-W272 NUCLEIC ACIDS RESEARCH, 32, Suppl. 2, W267-W272 2004/07 有 英語 研究論文(学術雑誌) 公開
KF Aoki, N Ueda, A Yamaguchi, T Akutsu, M Kanehisa, H Mamitsuka KF Aoki, N Ueda, A Yamaguchi, T Akutsu, M Kanehisa, H Mamitsuka KF Aoki, N Ueda, A Yamaguchi, T Akutsu, M Kanehisa, H Mamitsuka Managing and analyzing carbohydrate data Managing and analyzing carbohydrate data Managing and analyzing carbohydrate data SIGMOD RECORD, 33, 2, 33-38 SIGMOD RECORD, 33, 2, 33-38 SIGMOD RECORD, 33, 2, 33-38 2004/06 有 英語 研究論文(学術雑誌) 公開
Hiroshi Mamitsuka, Yasushi Okuno Hiroshi Mamitsuka, Yasushi Okuno Hiroshi Mamitsuka, Yasushi Okuno A hierarchical mixture of markov models for finding biologically active metabolic paths using gene expression and protein classes A hierarchical mixture of markov models for finding biologically active metabolic paths using gene expression and protein classes A hierarchical mixture of markov models for finding biologically active metabolic paths using gene expression and protein classes Proceedings - 2004 IEEE Computational Systems Bioinformatics Conference, CSB 2004, 341-352 Proceedings - 2004 IEEE Computational Systems Bioinformatics Conference, CSB 2004, 341-352 Proceedings - 2004 IEEE Computational Systems Bioinformatics Conference, CSB 2004, 341-352 2004 有 英語 研究論文(国際会議プロシーディングス) 公開
N Ueda, KF Aoki, H Mamitsuka N Ueda, KF Aoki, H Mamitsuka N Ueda, KF Aoki, H Mamitsuka A general probabilistic framework for mining labeled ordered trees A general probabilistic framework for mining labeled ordered trees A general probabilistic framework for mining labeled ordered trees PROCEEDINGS OF THE FOURTH SIAM INTERNATIONAL CONFERENCE ON DATA MINING, 357-368 PROCEEDINGS OF THE FOURTH SIAM INTERNATIONAL CONFERENCE ON DATA MINING, 357-368 PROCEEDINGS OF THE FOURTH SIAM INTERNATIONAL CONFERENCE ON DATA MINING, 357-368 2004 有 英語 研究論文(国際会議プロシーディングス) 公開
Mamitsuka, H, Okuno, Y, Yamaguchi, A Mamitsuka, H, Okuno, Y, Yamaguchi, A Mamitsuka, H, Okuno, Y, Yamaguchi, A Mining Biologically Active Patterns in Metabolic Pathways using Microarray Expression Profiles Mining Biologically Active Patterns in Metabolic Pathways using Microarray Expression Profiles Mining Biologically Active Patterns in Metabolic Pathways using Microarray Expression Profiles ACM SIGKDD Explorations, 5, 2, 113-121 ACM SIGKDD Explorations, 5, 2, 113-121 ACM SIGKDD Explorations, 5, 2, 113-121 2003/12 有 英語 研究論文(学術雑誌) 公開
Aoki, K. F, Yamaguchi, A, Okuno, Y, Akutsu, T, Ueda, N, Kanehisa, M, Mamitsuka, H Aoki, K. F, Yamaguchi, A, Okuno, Y, Akutsu, T, Ueda, N, Kanehisa, M, Mamitsuka, H Aoki, K. F, Yamaguchi, A, Okuno, Y, Akutsu, T, Ueda, N, Kanehisa, M, Mamitsuka, H Efficient Tree Matching Methods for Accurate Carbohydrate Database Queries. Efficient Tree Matching Methods for Accurate Carbohydrate Database Queries. Efficient Tree Matching Methods for Accurate Carbohydrate Database Queries. Genome Informatics (Proceedings of the Fourteenth International Conference on Genome Informatics), 14, 134-143 Genome Informatics (Proceedings of the Fourteenth International Conference on Genome Informatics), 14, 134-143 Genome Informatics (Proceedings of the Fourteenth International Conference on Genome Informatics), 14, 134-143 2003/12 有 英語 研究論文(国際会議プロシーディングス) 公開
Mamitsuka, H Mamitsuka, H Mamitsuka, H Hierarchical Latent Knowledge Analysis for Co-occurrence Data. Hierarchical Latent Knowledge Analysis for Co-occurrence Data. Hierarchical Latent Knowledge Analysis for Co-occurrence Data. Proceedings of the Twenties International Conference on Machine Learning (ICML 2003), 504-511 Proceedings of the Twenties International Conference on Machine Learning (ICML 2003), 504-511 Proceedings of the Twenties International Conference on Machine Learning (ICML 2003), 504-511 2003/08 有 英語 研究論文(国際会議プロシーディングス) 公開
H Mamitsuka H Mamitsuka H Mamitsuka Selective sampling with a hierarchical latent variable model Selective sampling with a hierarchical latent variable model Selective sampling with a hierarchical latent variable model ADVANCES IN INTELLIGENT DATA ANALYSIS V, 2810, 352-363 ADVANCES IN INTELLIGENT DATA ANALYSIS V, 2810, 352-363 ADVANCES IN INTELLIGENT DATA ANALYSIS V, 2810, 352-363 2003 有 英語 研究論文(学術雑誌) 公開
H Mamitsuka H Mamitsuka H Mamitsuka Detecting experimental noises in protein-protein interactions with iterative sampling and model-based clustering Detecting experimental noises in protein-protein interactions with iterative sampling and model-based clustering Detecting experimental noises in protein-protein interactions with iterative sampling and model-based clustering THIRD IEEE SYMPOSIUM ON BIOINFORMATICS AND BIOENGINEERING - BIBE 2003, PROCEEDINGS, 385-392 THIRD IEEE SYMPOSIUM ON BIOINFORMATICS AND BIOENGINEERING - BIBE 2003, PROCEEDINGS, 385-392 THIRD IEEE SYMPOSIUM ON BIOINFORMATICS AND BIOENGINEERING - BIBE 2003, PROCEEDINGS, 385-392 2003 有 英語 研究論文(国際会議プロシーディングス) 公開
H Mamitsuka H Mamitsuka H Mamitsuka Efficient unsupervised mining from noisy data sets: application to clustering co-occurrence data Efficient unsupervised mining from noisy data sets: application to clustering co-occurrence data Efficient unsupervised mining from noisy data sets: application to clustering co-occurrence data PROCEEDINGS OF THE THIRD SIAM INTERNATIONAL CONFERENCE ON DATA MINING, 239-243 PROCEEDINGS OF THE THIRD SIAM INTERNATIONAL CONFERENCE ON DATA MINING, 239-243 PROCEEDINGS OF THE THIRD SIAM INTERNATIONAL CONFERENCE ON DATA MINING, 239-243 2003 有 英語 研究論文(国際会議プロシーディングス) 公開
A Yamaguchi, H Mamitsuka A Yamaguchi, H Mamitsuka A Yamaguchi, H Mamitsuka Finding the maximum common subgraph of a partial k-tree and a graph with a polynomially bounded number of spanning trees Finding the maximum common subgraph of a partial k-tree and a graph with a polynomially bounded number of spanning trees Finding the maximum common subgraph of a partial k-tree and a graph with a polynomially bounded number of spanning trees ALGORITHMS AND COMPUTATION, PROCEEDINGS, 2906, 58-67 ALGORITHMS AND COMPUTATION, PROCEEDINGS, 2906, 58-67 ALGORITHMS AND COMPUTATION, PROCEEDINGS, 2906, 58-67 2003 有 英語 研究論文(学術雑誌) 公開
H Mamitsuka H Mamitsuka H Mamitsuka Empirical evaluation of ensemble feature subset selection methods for learning from a high-dimensional database in drug design Empirical evaluation of ensemble feature subset selection methods for learning from a high-dimensional database in drug design Empirical evaluation of ensemble feature subset selection methods for learning from a high-dimensional database in drug design THIRD IEEE SYMPOSIUM ON BIOINFORMATICS AND BIOENGINEERING - BIBE 2003, PROCEEDINGS, 253-257 THIRD IEEE SYMPOSIUM ON BIOINFORMATICS AND BIOENGINEERING - BIBE 2003, PROCEEDINGS, 253-257 THIRD IEEE SYMPOSIUM ON BIOINFORMATICS AND BIOENGINEERING - BIBE 2003, PROCEEDINGS, 253-257 2003 有 英語 研究論文(国際会議プロシーディングス) 公開
H Mamitsuka H Mamitsuka H Mamitsuka Efficient mining from heterogeneous data sets for predicting protein-protein interactions Efficient mining from heterogeneous data sets for predicting protein-protein interactions Efficient mining from heterogeneous data sets for predicting protein-protein interactions 14TH INTERNATIONAL WORKSHOP ON DATABASE AND EXPERT SYSTEMS APPLICATIONS, PROCEEDINGS, 32-36 14TH INTERNATIONAL WORKSHOP ON DATABASE AND EXPERT SYSTEMS APPLICATIONS, PROCEEDINGS, 32-36 14TH INTERNATIONAL WORKSHOP ON DATABASE AND EXPERT SYSTEMS APPLICATIONS, PROCEEDINGS, 32-36 2003 有 英語 研究論文(国際会議プロシーディングス) 公開
K Udaka, H Mamitsuka, Y Nakaseko, N Abe K Udaka, H Mamitsuka, Y Nakaseko, N Abe K Udaka, H Mamitsuka, Y Nakaseko, N Abe Empirical evaluation of a dynamic experiment design method for prediction of MHC class I-binding peptides Empirical evaluation of a dynamic experiment design method for prediction of MHC class I-binding peptides Empirical evaluation of a dynamic experiment design method for prediction of MHC class I-binding peptides JOURNAL OF IMMUNOLOGY, 169, 10, 5744-5753 JOURNAL OF IMMUNOLOGY, 169, 10, 5744-5753 JOURNAL OF IMMUNOLOGY, 169, 10, 5744-5753 2002/11 有 英語 研究論文(学術雑誌) 公開
Mamitsuka, H Mamitsuka, H Mamitsuka, H Iteratively Selecting Feature Subsets for Mining from High-Dimensional Databases. Iteratively Selecting Feature Subsets for Mining from High-Dimensional Databases. Iteratively Selecting Feature Subsets for Mining from High-Dimensional Databases. Lecture Notes in Computer Science (Proceedings of the Sixth European Conference on Principles and Practice of Knowledge Discovery in Databases (PKDD 2002)), 2431, 361-372 Lecture Notes in Computer Science (Proceedings of the Sixth European Conference on Principles and Practice of Knowledge Discovery in Databases (PKDD 2002)), 2431, 361-372 Lecture Notes in Computer Science (Proceedings of the Sixth European Conference on Principles and Practice of Knowledge Discovery in Databases (PKDD 2002)), 2431, 361-372 2002/08 有 英語 研究論文(国際会議プロシーディングス) 公開
馬見塚 拓, 安倍 直樹 馬見塚 拓, 安倍 直樹 集団質問学習 - データマイニング・バイオインフォマティクスへの展開 - (招待論文) 集団質問学習 - データマイニング・バイオインフォマティクスへの展開 - (招待論文) 電子情報通信学会和文論文誌, J85D-II, 5, 717-724 電子情報通信学会和文論文誌, J85D-II, 5, 717-724 , J85D-II, 5, 717-724 2002/05 有 日本語 研究論文(学術雑誌) 公開
K Udaka, H Mamitsuka, Y Nakaseko, N Abe K Udaka, H Mamitsuka, Y Nakaseko, N Abe K Udaka, H Mamitsuka, Y Nakaseko, N Abe Prediction of MHC class I binding peptides by a query learning algorithm based on hidden Markov models Prediction of MHC class I binding peptides by a query learning algorithm based on hidden Markov models Prediction of MHC class I binding peptides by a query learning algorithm based on hidden Markov models JOURNAL OF BIOLOGICAL PHYSICS, 28, 2, 183-194 JOURNAL OF BIOLOGICAL PHYSICS, 28, 2, 183-194 JOURNAL OF BIOLOGICAL PHYSICS, 28, 2, 183-194 2002 有 英語 研究論文(学術雑誌) 公開
Mamitsuka, H, Abe, N Mamitsuka, H, Abe, N Mamitsuka, H, Abe, N Efficient Mining from Large Databases by Query Learning. Efficient Mining from Large Databases by Query Learning. Efficient Mining from Large Databases by Query Learning. Proceedings of the Seventeenth International Conference on Machine Learning (ICML 2000), 575-582 Proceedings of the Seventeenth International Conference on Machine Learning (ICML 2000), 575-582 Proceedings of the Seventeenth International Conference on Machine Learning (ICML 2000), 575-582 2000/06 有 英語 研究論文(国際会議プロシーディングス) 公開
H Mamitsuka H Mamitsuka H Mamitsuka Predicting peptides that bind to MHC molecules using supervised learning of hidden Markov models Predicting peptides that bind to MHC molecules using supervised learning of hidden Markov models Predicting peptides that bind to MHC molecules using supervised learning of hidden Markov models PROTEINS-STRUCTURE FUNCTION AND GENETICS, 33, 4, 460-474 PROTEINS-STRUCTURE FUNCTION AND GENETICS, 33, 4, 460-474 PROTEINS-STRUCTURE FUNCTION AND GENETICS, 33, 4, 460-474 1998/12 有 英語 研究論文(学術雑誌) 公開
Abe, N, Mamitsuka, H Abe, N, Mamitsuka, H Abe, N, Mamitsuka, H Query Learning Strategies Using Boosting and Bagging. Query Learning Strategies Using Boosting and Bagging. Query Learning Strategies Using Boosting and Bagging. Proceedings of the Fifteenth International Conference on Machine Learning (ICML 98), 1-9 Proceedings of the Fifteenth International Conference on Machine Learning (ICML 98), 1-9 Proceedings of the Fifteenth International Conference on Machine Learning (ICML 98), 1-9 1998/07 有 英語 研究論文(国際会議プロシーディングス) 公開
N Abe, H Mamitsuka, A Nakamura N Abe, H Mamitsuka, A Nakamura N Abe, H Mamitsuka, A Nakamura Empirical comparison of competing query learning methods Empirical comparison of competing query learning methods Empirical comparison of competing query learning methods DISCOVERY SCIENCE, 1532, 387-388 DISCOVERY SCIENCE, 1532, 387-388 DISCOVERY SCIENCE, 1532, 387-388 1998 有 英語 研究論文(学術雑誌) 公開
N Abe, H Mamitsuka N Abe, H Mamitsuka N Abe, H Mamitsuka Predicting protein secondary structure using stochastic tree grammars Predicting protein secondary structure using stochastic tree grammars Predicting protein secondary structure using stochastic tree grammars MACHINE LEARNING, 29, 2-3, 275-301 MACHINE LEARNING, 29, 2-3, 275-301 MACHINE LEARNING, 29, 2-3, 275-301 1997/11 有 英語 研究論文(学術雑誌) 公開
Mamitsuka, H Mamitsuka, H Mamitsuka, H Supervised Learning of Hidden Markov Models for Sequence Discrimination. Supervised Learning of Hidden Markov Models for Sequence Discrimination. Supervised Learning of Hidden Markov Models for Sequence Discrimination. Proceeds of the First International Conference on Computational Molecular Biology (RECOMB 97), 202-208 Proceeds of the First International Conference on Computational Molecular Biology (RECOMB 97), 202-208 Proceeds of the First International Conference on Computational Molecular Biology (RECOMB 97), 202-208 1997/01 有 英語 研究論文(国際会議プロシーディングス) 公開
Hiroshi Mamitsuka Hiroshi Mamitsuka Hiroshi Mamitsuka A learning method of hidden Markov models for sequence discrimination A learning method of hidden Markov models for sequence discrimination A learning method of hidden Markov models for sequence discrimination Journal of Computational Biology, 3, 3, 361-373 Journal of Computational Biology, 3, 3, 361-373 Journal of Computational Biology, 3, 3, 361-373 1996 有 英語 研究論文(学術雑誌) 公開
H MAMITSUKA H MAMITSUKA H MAMITSUKA REPRESENTING INTER-RESIDUE DEPENDENCIES IN PROTEIN SEQUENCES WITH PROBABILISTIC NETWORKS REPRESENTING INTER-RESIDUE DEPENDENCIES IN PROTEIN SEQUENCES WITH PROBABILISTIC NETWORKS REPRESENTING INTER-RESIDUE DEPENDENCIES IN PROTEIN SEQUENCES WITH PROBABILISTIC NETWORKS COMPUTER APPLICATIONS IN THE BIOSCIENCES, 11, 4, 413-422 COMPUTER APPLICATIONS IN THE BIOSCIENCES, 11, 4, 413-422 COMPUTER APPLICATIONS IN THE BIOSCIENCES, 11, 4, 413-422 1995/08 有 英語 研究論文(学術雑誌) 公開
H MAMITSUKA, K YAMANISHI H MAMITSUKA, K YAMANISHI H MAMITSUKA, K YAMANISHI ALPHA-HELIX REGION PREDICTION WITH STOCHASTIC RULE LEARNING ALPHA-HELIX REGION PREDICTION WITH STOCHASTIC RULE LEARNING ALPHA-HELIX REGION PREDICTION WITH STOCHASTIC RULE LEARNING COMPUTER APPLICATIONS IN THE BIOSCIENCES, 11, 4, 399-411 COMPUTER APPLICATIONS IN THE BIOSCIENCES, 11, 4, 399-411 COMPUTER APPLICATIONS IN THE BIOSCIENCES, 11, 4, 399-411 1995/08 有 英語 研究論文(学術雑誌) 公開
Hiroshi Mamitsuka, Kenji Yamanishi Hiroshi Mamitsuka, Kenji Yamanishi Hiroshi Mamitsuka, Kenji Yamanishi α-helix region prediction with stochastic rule learning α-helix region prediction with stochastic rule learning α-helix region prediction with stochastic rule learning Bioinformatics, 11, 4, 399-411 Bioinformatics, 11, 4, 399-411 Bioinformatics, 11, 4, 399-411 1995/08 有 英語 研究論文(学術雑誌) 公開
Hiroshi Mamitsuka Hiroshi Mamitsuka Hiroshi Mamitsuka Representing inter-residue dependencies in protein sequences with probabilistic networks Representing inter-residue dependencies in protein sequences with probabilistic networks Representing inter-residue dependencies in protein sequences with probabilistic networks Bioinformatics, 11, 4, 413-422 Bioinformatics, 11, 4, 413-422 Bioinformatics, 11, 4, 413-422 1995/08 有 英語 研究論文(学術雑誌) 公開
Mamitsuka, H, Abe, N Mamitsuka, H, Abe, N Mamitsuka, H, Abe, N Predicting Location and Structure of Beta-Sheet Regions Using Stochastic Tree Grammars. Predicting Location and Structure of Beta-Sheet Regions Using Stochastic Tree Grammars. Predicting Location and Structure of Beta-Sheet Regions Using Stochastic Tree Grammars. Proceedings of the Second International Conferenceon Intelligent Systems for Molecular Biology (ISMB 94), 276-284 Proceedings of the Second International Conferenceon Intelligent Systems for Molecular Biology (ISMB 94), 276-284 Proceedings of the Second International Conferenceon Intelligent Systems for Molecular Biology (ISMB 94), 276-284 1994/08 有 英語 研究論文(国際会議プロシーディングス) 公開
Abe, N, Mamitsuka, H Abe, N, Mamitsuka, H Abe, N, Mamitsuka, H A New Method for Predicting Protein Secondary Structures Based on Stochastic Tree Grammars. A New Method for Predicting Protein Secondary Structures Based on Stochastic Tree Grammars. A New Method for Predicting Protein Secondary Structures Based on Stochastic Tree Grammars. Proceedings of the Eleventh International Conference on Machine Learning (ML 94), 3-11 Proceedings of the Eleventh International Conference on Machine Learning (ML 94), 3-11 Proceedings of the Eleventh International Conference on Machine Learning (ML 94), 3-11 1994/07 有 英語 研究論文(国際会議プロシーディングス) 公開
Mamitsuka, H, Yamanishi, K Mamitsuka, H, Yamanishi, K Mamitsuka, H, Yamanishi, K Protein Alpha-Helix Region Prediction Based on Stochastic Rule Learning. Protein Alpha-Helix Region Prediction Based on Stochastic Rule Learning. Protein Alpha-Helix Region Prediction Based on Stochastic Rule Learning. Proceedings of the Twenty-sixth Annual Hawaii International Conference on System Sciences (HICSS 26), 1, 659-668 Proceedings of the Twenty-sixth Annual Hawaii International Conference on System Sciences (HICSS 26), 1, 659-668 Proceedings of the Twenty-sixth Annual Hawaii International Conference on System Sciences (HICSS 26), 1, 659-668 1993/01 有 英語 研究論文(国際会議プロシーディングス) 公開
Mamitsuka, H, Yamanishi, K Mamitsuka, H, Yamanishi, K Mamitsuka, H, Yamanishi, K Protein Secondary Structure Prediction Based on Stochastic Rule Learning. Protein Secondary Structure Prediction Based on Stochastic Rule Learning. Protein Secondary Structure Prediction Based on Stochastic Rule Learning. Lecture Notes in Computer Science (Proceedings of the Third Annual Workshop on Algorithmic Learning Theory (ALT 92)), 743, 240-251 Lecture Notes in Computer Science (Proceedings of the Third Annual Workshop on Algorithmic Learning Theory (ALT 92)), 743, 240-251 Lecture Notes in Computer Science (Proceedings of the Third Annual Workshop on Algorithmic Learning Theory (ALT 92)), 743, 240-251 1992/10 有 英語 研究論文(国際会議プロシーディングス) 公開

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タイトル言語:
Misc
著者 著者(日本語) 著者(英語) タイトル タイトル(日本語) タイトル(英語) 書誌情報等 書誌情報等(日本語) 書誌情報等(英語) 出版年月 査読の有無 記述言語 掲載種別 公開
NAKAMURA Atsuyoshi, TAKIGAWA Ichigaku, TOSAKA Hisashi, KUDO Mineichi, MAMITSUKA Hiroshi NAKAMURA Atsuyoshi, TAKIGAWA Ichigaku, TOSAKA Hisashi, KUDO Mineichi, MAMITSUKA Hiroshi NAKAMURA Atsuyoshi, TAKIGAWA Ichigaku, TOSAKA Hisashi, KUDO Mineichi, MAMITSUKA Hiroshi Finding Approximate Frequent Patterns from DNA Sequences Finding Approximate Frequent Patterns from DNA Sequences Finding Approximate Frequent Patterns from DNA Sequences 人工知能学会人工知能基本問題研究会資料, 85th, 23-28 人工知能学会人工知能基本問題研究会資料, 85th, 23-28 人工知能学会人工知能基本問題研究会資料, 85th, 23-28 2012/01/26 英語 公開
TAKAHASHI Keiichiro, TAKIGAWA Ichigaku, MAMITSUKA Hiroshi TAKAHASHI Keiichiro, TAKIGAWA Ichigaku, MAMITSUKA Hiroshi TAKAHASHI Keiichiro, TAKIGAWA Ichigaku, MAMITSUKA Hiroshi Enumerating Biclusters on Gene Expression Data by Mining Frequent Itemsets Enumerating Biclusters on Gene Expression Data by Mining Frequent Itemsets Enumerating Biclusters on Gene Expression Data by Mining Frequent Itemsets 情報計算化学生物学会大会予稿集, 2011 (CD-ROM), ROMBUNNO.JSBI-41 情報計算化学生物学会大会予稿集, 2011 (CD-ROM), ROMBUNNO.JSBI-41 情報計算化学生物学会大会予稿集, 2011 (CD-ROM), ROMBUNNO.JSBI-41 2011/11/08 英語 公開
TAKIGAWA Ichigaku, MAMITSUKA Hiroshi TAKIGAWA Ichigaku, MAMITSUKA Hiroshi TAKIGAWA Ichigaku, MAMITSUKA Hiroshi Parametric summarization of frequent subgraphs for characterizing structural features of bioactive compounds Parametric summarization of frequent subgraphs for characterizing structural features of bioactive compounds Parametric summarization of frequent subgraphs for characterizing structural features of bioactive compounds Proc Annu Conf Jpn Soc Bioinform, 2010, P019.1-P019.2 Proc Annu Conf Jpn Soc Bioinform, 2010, P019.1-P019.2 Proc Annu Conf Jpn Soc Bioinform, 2010, P019.1-P019.2 2010 英語 公開
KAYANO Mitsunori, TAKIGAWA Ichigaku, SHIGA Motoki, TSUDA Koji, MAMITSUKA Hiroshi KAYANO Mitsunori, TAKIGAWA Ichigaku, SHIGA Motoki, TSUDA Koji, MAMITSUKA Hiroshi KAYANO Mitsunori, TAKIGAWA Ichigaku, SHIGA Motoki, TSUDA Koji, MAMITSUKA Hiroshi Finding three-way gene interactions from transcript and genotype data Finding three-way gene interactions from transcript and genotype data Finding three-way gene interactions from transcript and genotype data Proc Annu Conf Jpn Soc Bioinform, 2010, P069.1-P069.2 Proc Annu Conf Jpn Soc Bioinform, 2010, P069.1-P069.2 Proc Annu Conf Jpn Soc Bioinform, 2010, P069.1-P069.2 2010 英語 公開
MATSUSHIMA Yoshifumi, TAKIGAWA Ichigaku, ONO Yasuko, SORIMACHI Hiroyuki, MAMITSUKA Hiroshi MATSUSHIMA Yoshifumi, TAKIGAWA Ichigaku, ONO Yasuko, SORIMACHI Hiroyuki, MAMITSUKA Hiroshi MATSUSHIMA Yoshifumi, TAKIGAWA Ichigaku, ONO Yasuko, SORIMACHI Hiroyuki, MAMITSUKA Hiroshi Developing a Substrate Predictor with Sequence information Developing a Substrate Predictor with Sequence information Developing a Substrate Predictor with Sequence information Proc Annu Conf Jpn Soc Bioinform, 2008, P071.1-P071.2 Proc Annu Conf Jpn Soc Bioinform, 2008, P071.1-P071.2 Proc Annu Conf Jpn Soc Bioinform, 2008, P071.1-P071.2 2008 英語 公開
KAYANO Mitsunori, TAKIGAWA Ichigaku, SHIGA Motoki, TSUDA Koji, MAMITSUKA Hiroshi KAYANO Mitsunori, TAKIGAWA Ichigaku, SHIGA Motoki, TSUDA Koji, MAMITSUKA Hiroshi KAYANO Mitsunori, TAKIGAWA Ichigaku, SHIGA Motoki, TSUDA Koji, MAMITSUKA Hiroshi Association of SNPs with Multiple Genes Using a Nonlinear Regression Model Association of SNPs with Multiple Genes Using a Nonlinear Regression Model Association of SNPs with Multiple Genes Using a Nonlinear Regression Model Proc Annu Conf Jpn Soc Bioinform, 2008, P049.1-P049.2 Proc Annu Conf Jpn Soc Bioinform, 2008, P049.1-P049.2 Proc Annu Conf Jpn Soc Bioinform, 2008, P049.1-P049.2 2008 英語 公開
TAKIGAWA Ichigaku, HASHIMOTO Kosuke, SHIGA Motoki, KANEHISA Minoru, MAMITSUKA Hiroshi TAKIGAWA Ichigaku, HASHIMOTO Kosuke, SHIGA Motoki, KANEHISA Minoru, MAMITSUKA Hiroshi TAKIGAWA Ichigaku, HASHIMOTO Kosuke, SHIGA Motoki, KANEHISA Minoru, MAMITSUKA Hiroshi Efficiently finding significant substructural patterns conserved in glycans Efficiently finding significant substructural patterns conserved in glycans Efficiently finding significant substructural patterns conserved in glycans Proc Annu Conf Jpn Soc Bioinform, 2008, P066.1-P066.2 Proc Annu Conf Jpn Soc Bioinform, 2008, P066.1-P066.2 Proc Annu Conf Jpn Soc Bioinform, 2008, P066.1-P066.2 2008 英語 公開
瀧川一学, 馬見塚拓 瀧川一学, 馬見塚拓 TAKIGAWA ICHIGAKU, MAMITSUKA HIROSHI 発現プロファイルに基づく代謝経路の遺伝子系列ランキング 発現プロファイルに基づく代謝経路の遺伝子系列ランキング Gene Sequence Ranking Based on Expression Profiles for Metabolic Pathway Analysis 情報処理学会研究報告, 2006, 13(BIO-4), 1-7-7 情報処理学会研究報告, 2006, 13(BIO-4), 1-7-7 情報処理学会研究報告, 2006, 13(BIO-4), 1-7-7 2006/02/09 日本語 公開
KF Aoki-Kinoshita, N Ueda, H Mamitsuka, S Goto, M Kanehisa KF Aoki-Kinoshita, N Ueda, H Mamitsuka, S Goto, M Kanehisa KF Aoki-Kinoshita, N Ueda, H Mamitsuka, S Goto, M Kanehisa A profile HMM for tree structures to locate glycan structure profiles A profile HMM for tree structures to locate glycan structure profiles A profile HMM for tree structures to locate glycan structure profiles GLYCOBIOLOGY, 15, 11, 1187-1188 GLYCOBIOLOGY, 15, 11, 1187-1188 GLYCOBIOLOGY, 15, 11, 1187-1188 2005/11 英語 研究発表ペーパー・要旨(国際会議) 公開
Shanfeng Zhu, 奥野 恭史, 辻本 豪三, 馬見塚拓 Shanfeng Zhu, 奥野 恭史, 辻本 豪三, 馬見塚拓 ZHU Shanfeng, OKUNO Yasushi, TSUJIMOTO Gozoh, MAMITSUKA Hiroshi 確率モデルに基づくテキスト共起データからのマイニング 確率モデルに基づくテキスト共起データからのマイニング Mining literature co-occurrence data using a probabilistic model 情報処理学会研究報告バイオ情報学（研究報告バイオ情報学（BIO））, 2005, 99, 9-16 情報処理学会研究報告バイオ情報学（研究報告バイオ情報学（BIO））, 2005, 99, 9-16 IPSJ SIG technical reports, 2005, 99, 9-16 2005/10/07 英語 公開
KF Aoki, M Kanehisa, H Mamitsuka KF Aoki, M Kanehisa, H Mamitsuka KF Aoki, M Kanehisa, H Mamitsuka Glycan tree alignment and substitution matrix for finding relationships between glycan linkages Glycan tree alignment and substitution matrix for finding relationships between glycan linkages Glycan tree alignment and substitution matrix for finding relationships between glycan linkages GLYCOBIOLOGY, 14, 11, 1070-1071 GLYCOBIOLOGY, 14, 11, 1070-1071 GLYCOBIOLOGY, 14, 11, 1070-1071 2004/11 英語 研究発表ペーパー・要旨(国際会議) 公開
中村 篤祥, 馬見塚 拓, 鳥羽 弘康, 安倍 直樹 中村 篤祥, 馬見塚 拓, 鳥羽 弘康, 安倍 直樹 Nakamura Atsuyoshi, Mamitsuka Hiroshi, Toba Hiroyasu, Abe Naoki ブール変数実数多項式による嗜好関数の学習 ブール変数実数多項式による嗜好関数の学習 Learning personal preference functions using boolean-variable real-valued multivariate polynomials 全国大会講演論文集, 第52回平成8年前期, 1, 55-56 全国大会講演論文集, 第52回平成8年前期, 1, 55-56 , 第52回平成8年前期, 1, 55-56 1996/03/06 日本語 公開

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タイトル言語:
講演・口頭発表等
タイトル タイトル(日本語) タイトル(英語) 会議名 会議名(日本語) 会議名(英語) 主催者 主催者(日本語) 主催者(英語) 発表年月日 記述言語 会議種別 公開
バイオインフォマティクスのためのグラフによるデータ統合型機械学習 バイオインフォマティクスのためのグラフによるデータ統合型機械学習 第10回生命医薬情報学連合大会(IIBMP2021)、ワークショップ：人工知能と生命誌に基づく生命医科学のためのバイオインフォマティクス 第10回生命医薬情報学連合大会(IIBMP2021)、ワークショップ：人工知能と生命誌に基づく生命医科学のためのバイオインフォマティクス 日本バイオインフォマティクス学会(JSBi) 日本バイオインフォマティクス学会(JSBi) 2021/09/28 日本語 シンポジウム・ワークショップパネル(指名) 公開
Machine learning for predicting drug-target interactions[招待あり] Machine learning for predicting drug-target interactions [招待あり] Machine learning for predicting drug-target interactions [招待あり] 15th World Congress of Societies of Biological Psychiatry, S-05 | Big biological data, data integration and learning algorithms in deciphering major depression and its treatments 15th World Congress of Societies of Biological Psychiatry, S-05 | Big biological data, data integration and learning algorithms in deciphering major depression and its treatments 15th World Congress of Societies of Biological Psychiatry, S-05 | Big biological data, data integration and learning algorithms in deciphering major depression and its treatments World Federation of Societies of Biological Psychiatry World Federation of Societies of Biological Psychiatry 2021/06/28 英語 口頭発表(招待・特別) 公開
Graph-based Machine Learning Graph-based Machine Learning Graph-based Machine Learning Seminar Seminar Seminar Hokkaido University Hokkaido University 2021/04/15 公開
Fast and Robust Multi-view Multi-task Learning through Group Sparsity Fast and Robust Multi-view Multi-task Learning through Group Sparsity Fast and Robust Multi-view Multi-task Learning through Group Sparsity Seminar Seminar Seminar IBM T. J. Watson Research Center IBM T. J. Watson Research Center 2020/02/13 英語 公開
Computational Metabolic Identification from Mass Spectra -- Machine Learning Approach -- Computational Metabolic Identification from Mass Spectra -- Machine Learning Approach -- Computational Metabolic Identification from Mass Spectra -- Machine Learning Approach -- Seminar Seminar Seminar Humboldt University Berlin Humboldt University Berlin 2020/01/23 英語 公開
Graph-based Machine Learning Graph-based Machine Learning Graph-based Machine Learning Seminar Seminar Seminar University of Malaya University of Malaya 2019/12/03 英語 公開講演、セミナー、チュートリアル、講習、講義 公開
Machine Learning Techniques and Applications: Past, Present and Future[招待あり] Machine Learning Techniques and Applications: Past, Present and Future [招待あり] Machine Learning Techniques and Applications: Past, Present and Future [招待あり] DSx Conference 2019 DSx Conference 2019 DSx Conference 2019 Perdana University Perdana University 2019/11/26 英語 口頭発表(基調) 公開
Graph-smooth, Data-integrative Machine Learning for Bioinformatics Graph-smooth, Data-integrative Machine Learning for Bioinformatics Graph-smooth, Data-integrative Machine Learning for Bioinformatics Seminar Seminar Seminar Shenzhen University Shenzhen University 2019/08/20 英語 口頭発表(招待・特別) 公開
Graph-smooth, Data-integrative Machine Learning for Bioinformatics[招待あり] Graph-smooth, Data-integrative Machine Learning for Bioinformatics [招待あり] Graph-smooth, Data-integrative Machine Learning for Bioinformatics [招待あり] Seminar Seminar Seminar Perdana University Perdana University 2019/06/28 英語 口頭発表(招待・特別) 公開
Similarity-based Machine Learning Approaches for Predicting Drug-Target Interactions[招待あり] Similarity-based Machine Learning Approaches for Predicting Drug-Target Interactions [招待あり] Similarity-based Machine Learning Approaches for Predicting Drug-Target Interactions [招待あり] Seminar Seminar Seminar University of Malaya University of Malaya 2019/06/26 英語 口頭発表(招待・特別) 公開
Graph-regularized, Data-integrative Machine Learning for Bioinformatics[招待あり] Graph-regularized, Data-integrative Machine Learning for Bioinformatics [招待あり] Graph-regularized, Data-integrative Machine Learning for Bioinformatics [招待あり] Seminar Seminar Seminar Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences 2019/06/21 英語 口頭発表(招待・特別) 公開
Graph-based Machine Learning[招待あり] Graph-based Machine Learning [招待あり] Graph-based Machine Learning [招待あり] Seminar Seminar Seminar Fudan University Fudan University 2019/06/20 英語 口頭発表(招待・特別) 公開
Graph-based Machine Learning[招待あり] Graph-based Machine Learning [招待あり] Graph-based Machine Learning [招待あり] Workshop on Bioinformatics and Data Analysis Workshop on Bioinformatics and Data Analysis Workshop on Bioinformatics and Data Analysis Xi'an Jiao Tong University Xi'an Jiao Tong University 2019/06/14 英語 口頭発表(招待・特別) 公開
Graph-based Machine Learning Graph-based Machine Learning Graph-based Machine Learning Seminar Seminar Seminar Kyushu Institute of Technology Kyushu Institute of Technology 2019/05/10 英語 口頭発表(招待・特別) 公開
Machine Learning for Biological Sciences[招待あり] Machine Learning for Biological Sciences [招待あり] セミナー セミナー 国立国際医療研究センター研究所 国立国際医療研究センター研究所 2018/11/30 日本語 口頭発表(招待・特別) 公開
機械学習による生物科学応用[招待あり] 機械学習による生物科学応用 [招待あり] 第1245回生物科学セミナー 第1245回生物科学セミナー 東京大学理学部生物科学科 東京大学理学部生物科学科 2018/11/28 日本語 口頭発表(招待・特別) 公開
Graph-regularized, Data-integrative Machine Learning for Bioinformatics[招待あり] Graph-regularized, Data-integrative Machine Learning for Bioinformatics [招待あり] Graph-regularized, Data-integrative Machine Learning for Bioinformatics [招待あり] Seminar Seminar Seminar Ho Chi Minh City National University of Science Ho Chi Minh City National University of Science 2018/11/17 英語 口頭発表(招待・特別) 公開
Graph-based Machine Learning[招待あり] Graph-based Machine Learning [招待あり] Graph-based Machine Learning [招待あり] 5th SHTP Annual International Conference 2018 5th SHTP Annual International Conference 2018 5th SHTP Annual International Conference 2018 2018/11/16 英語 口頭発表(招待・特別) 公開
Database, prediction and beyond[招待あり] Database, prediction and beyond [招待あり] 反町洋之博士 追悼記念シンポジウム~Three Decades of Calpain~ 反町洋之博士 追悼記念シンポジウム~Three Decades of Calpain~ 2018/07/30 日本語 口頭発表(招待・特別) 公開
Data Integrative Machine Learning for Bioinformatics[招待あり] Data Integrative Machine Learning for Bioinformatics [招待あり] Data Integrative Machine Learning for Bioinformatics [招待あり] Second Belgrade BioInformatics Conference (BelBi 2018) Second Belgrade BioInformatics Conference (BelBi 2018) Second Belgrade BioInformatics Conference (BelBi 2018) 2018/06/21 英語 口頭発表(招待・特別) 公開
Label Propagation over Multiple Graphs[招待あり] Label Propagation over Multiple Graphs [招待あり] Label Propagation over Multiple Graphs [招待あり] Seminar Seminar Seminar ThuyLoi University ThuyLoi University 2018/03/22 英語 口頭発表(招待・特別) 公開
Applying "Learning to Rank" to Large-scale MeSH Indexing[招待あり] Applying "Learning to Rank" to Large-scale MeSH Indexing [招待あり] Applying "Learning to Rank" to Large-scale MeSH Indexing [招待あり] Seminar Seminar Seminar Hanoi University of Science and Technology Hanoi University of Science and Technology 2018/03/20 英語 口頭発表(招待・特別) 公開
Similarly-based Machine Learning Approaches for Predicting Drug-target Interactions[招待あり] Similarly-based Machine Learning Approaches for Predicting Drug-target Interactions [招待あり] Similarly-based Machine Learning Approaches for Predicting Drug-target Interactions [招待あり] Sixth International Symposium on Integrated Uncertainty in Knowledge Modelling and Decision Making (IUKM 2018) Sixth International Symposium on Integrated Uncertainty in Knowledge Modelling and Decision Making (IUKM 2018) Sixth International Symposium on Integrated Uncertainty in Knowledge Modelling and Decision Making (IUKM 2018) 2018/03/16 英語 口頭発表(招待・特別) 公開
Collaborative Matrix Factorization for Predicting Drug-Target Interactions Collaborative Matrix Factorization for Predicting Drug-Target Interactions Collaborative Matrix Factorization for Predicting Drug-Target Interactions Internal Seminar Internal Seminar Internal Seminar Keio University Keio University 2017/04/20 英語 口頭発表(招待・特別) 公開
Learning to Rank: Applications to Bioinformatics[招待あり] Learning to Rank: Applications to Bioinformatics [招待あり] Learning to Rank: Applications to Bioinformatics [招待あり] Seminar, Machine Learning Coffee Series Seminar, Machine Learning Coffee Series Seminar, Machine Learning Coffee Series University of Helsinki and Aalto University University of Helsinki and Aalto University 2017/03/27 英語 口頭発表(招待・特別) 公開
機械学習・データマイニング技術／応用の過去・現在 そして未来[招待あり] 機械学習・データマイニング技術／応用の過去・現在 そして未来 [招待あり] 人工知能学会 第102回人工知能基本問題研究会(SIG-FPAI) 人工知能学会 第102回人工知能基本問題研究会(SIG-FPAI) 人工知能学会 人工知能学会 2016/12/12 日本語 口頭発表(招待・特別) 公開
Machine Learning Applications:Past, Present and Future[招待あり] Machine Learning Applications:Past, Present and Future [招待あり] Machine Learning Applications:Past, Present and Future [招待あり] Fifth International Symposium on Integrated Uncertainty in Knowledge Modeling and Decision Making (IUKM 2016) Fifth International Symposium on Integrated Uncertainty in Knowledge Modeling and Decision Making (IUKM 2016) Fifth International Symposium on Integrated Uncertainty in Knowledge Modeling and Decision Making (IUKM 2016) 2016/11/30 英語 口頭発表(基調) 公開
Collaborative Matrix Factorization for Predicting Drug-Target Interactions Collaborative Matrix Factorization for Predicting Drug-Target Interactions Collaborative Matrix Factorization for Predicting Drug-Target Interactions Seminar Seminar Seminar University of Engineering and Technology, National University of Vietnam in Hanoi University of Engineering and Technology, National University of Vietnam in Hanoi 2016/11/29 英語 口頭発表(招待・特別) 公開
Label Propagation over Multiple Graphs Label Propagation over Multiple Graphs Label Propagation over Multiple Graphs Seminar Seminar Seminar Hanoi University of Science and Technology Hanoi University of Science and Technology 2016/11/28 英語 その他 公開
Recent Development in Bioinformatics[招待あり] Recent Development in Bioinformatics [招待あり] セミナー セミナー 協和発酵キリン株式会社 探索研究所 協和発酵キリン株式会社 探索研究所 2016/07/27 日本語 公開講演、セミナー、チュートリアル、講習、講義 公開
Machine Learning for Predicting Cleavability of Calpain Proteolysis[招待あり] Machine Learning for Predicting Cleavability of Calpain Proteolysis [招待あり] Machine Learning for Predicting Cleavability of Calpain Proteolysis [招待あり] 'The Biology of Calpain in Health and Disease', FASEB Science Research Conference 'The Biology of Calpain in Health and Disease', FASEB Science Research Conference 'The Biology of Calpain in Health and Disease', FASEB Science Research Conference 2016/07/17 英語 口頭発表(招待・特別) 公開
Collaborative Matrix Factorization for Predicting Drug-Target Interactions[招待あり] Collaborative Matrix Factorization for Predicting Drug-Target Interactions [招待あり] Collaborative Matrix Factorization for Predicting Drug-Target Interactions [招待あり] Seminar Seminar Seminar Humboldt-Universitat zu Berlin Humboldt-Universitat zu Berlin 2015/12/03 英語 口頭発表(招待・特別) 公開
Greetings from Kyoto[招待あり] Greetings from Kyoto [招待あり] Greetings from Kyoto [招待あり] Caroline von-Humboldt Professorship Award Ceremony Caroline von-Humboldt Professorship Award Ceremony Caroline von-Humboldt Professorship Award Ceremony Humboldt-Universitat zu Berlin Humboldt-Universitat zu Berlin 2015/12/01 英語 口頭発表(招待・特別) 公開
Panel session[招待あり] Panel session [招待あり] Panel session [招待あり] CIM Workshop on Machine Learning CIM Workshop on Machine Learning CIM Workshop on Machine Learning Uppsala University Uppsala University 2015/10/09 英語 シンポジウム・ワークショップパネル(指名) 公開
Collaborative Matrix Factorization for Predicting Drug-Target Interactions[招待あり] Collaborative Matrix Factorization for Predicting Drug-Target Interactions [招待あり] Collaborative Matrix Factorization for Predicting Drug-Target Interactions [招待あり] CIM Workshop on Machine Learning CIM Workshop on Machine Learning CIM Workshop on Machine Learning Uppsala University Uppsala University 2015/10/08 英語 口頭発表(招待・特別) 公開
Collaborative Matrix Factorization for Predicting Drug-Target Interactions[招待あり] Collaborative Matrix Factorization for Predicting Drug-Target Interactions [招待あり] Collaborative Matrix Factorization for Predicting Drug-Target Interactions [招待あり] Seminar Seminar Seminar National Tsing Hua University National Tsing Hua University 2015/01/21 英語 口頭発表(招待・特別) 公開
Mining from Biological Networks: Preserving Network Localities[招待あり] Mining from Biological Networks: Preserving Network Localities [招待あり] Mining from Biological Networks: Preserving Network Localities [招待あり] Seminar Seminar Seminar Fudan University Fudan University 2014/10/24 英語 口頭発表(招待・特別) 公開
Mining from Biological Networks: Preserving Network Localities[招待あり] Mining from Biological Networks: Preserving Network Localities [招待あり] Mining from Biological Networks: Preserving Network Localities [招待あり] Seminar Seminar Seminar Lille 1 University Lille 1 University 2014/09/30 英語 口頭発表(招待・特別) 公開
Data-integrative Approach for Genomics[招待あり] Data-integrative Approach for Genomics [招待あり] Data-integrative Approach for Genomics [招待あり] Sweden-Kyoto Symposium 2014 Sweden-Kyoto Symposium 2014 Sweden-Kyoto Symposium 2014 Kyoto University Kyoto University 2014/09/12 英語 口頭発表(招待・特別) 公開
Mining from Biological Networks: Preserving Network Localities[招待あり] Mining from Biological Networks: Preserving Network Localities [招待あり] Mining from Biological Networks: Preserving Network Localities [招待あり] 2014 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology 2014 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology 2014 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology Computational Intelligence Society, IEEE Computational Intelligence Society, IEEE 2014/05/22 英語 口頭発表(基調) 公開
Roundtable: Future Directions in Computational Intelligence in Bioinformatics Research[招待あり] Roundtable: Future Directions in Computational Intelligence in Bioinformatics Research [招待あり] Roundtable: Future Directions in Computational Intelligence in Bioinformatics Research [招待あり] 2014 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology 2014 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology 2014 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology Computational Intelligence Society, IEEE Computational Intelligence Society, IEEE 2014/05/21 英語 シンポジウム・ワークショップパネル(指名) 公開
Mining Metabolic Pathways through Gene Expression[招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] euSYSBIO ? Master・Efs Degree Programme in Computational and Systems Biology euSYSBIO ? Master・Efs Degree Programme in Computational and Systems Biology euSYSBIO ? Master・Efs Degree Programme in Computational and Systems Biology Erasmus Mundus Erasmus Mundus 2014/04/28 英語 口頭発表(招待・特別) 公開
Mining Patterns from Trees[招待あり] Mining Patterns from Trees [招待あり] Mining Patterns from Trees [招待あり] euSYSBIO ? Master・Efs Degree Programme in Computational and Systems Biology euSYSBIO ? Master・Efs Degree Programme in Computational and Systems Biology euSYSBIO ? Master・Efs Degree Programme in Computational and Systems Biology Erasmus Mundus Erasmus Mundus 2014/04/25 英語 口頭発表(招待・特別) 公開
Mining Patterns from Sequences: Hidden Markov Models and Learning[招待あり] Mining Patterns from Sequences: Hidden Markov Models and Learning [招待あり] Mining Patterns from Sequences: Hidden Markov Models and Learning [招待あり] euSYSBIO ? Master・Efs Degree Programme in Computational and Systems Biology euSYSBIO ? Master・Efs Degree Programme in Computational and Systems Biology euSYSBIO ? Master・Efs Degree Programme in Computational and Systems Biology Erasmus Mundus Erasmus Mundus 2014/04/24 英語 口頭発表(招待・特別) 公開
Collaborative Matrix Factorization for Predicting Drug-Target Interactions[招待あり] Collaborative Matrix Factorization for Predicting Drug-Target Interactions [招待あり] Collaborative Matrix Factorization for Predicting Drug-Target Interactions [招待あり] Seminar, Lille 1 University Seminar, Lille 1 University Seminar, Lille 1 University Centre Europ?en pour les Math?matiques, la Physique et leurs interactions (CEMPI) Centre Europ?en pour les Math?matiques, la Physique et leurs interactions (CEMPI) 2014/03/26 英語 口頭発表(招待・特別) 公開
Collaborative Matrix Factorization for Predicting Drug-Target Interactions[招待あり] Collaborative Matrix Factorization for Predicting Drug-Target Interactions [招待あり] Collaborative Matrix Factorization for Predicting Drug-Target Interactions [招待あり] Trends in Machine Learning (TML) 2014 Trends in Machine Learning (TML) 2014 Trends in Machine Learning (TML) 2014 Kyoto University Kyoto University 2014/03/18 英語 口頭発表(招待・特別) 公開
Collaborative Matrix Factorization for Predicting Drug-Target Interactions[招待あり] Collaborative Matrix Factorization for Predicting Drug-Target Interactions [招待あり] Collaborative Matrix Factorization for Predicting Drug-Target Interactions [招待あり] Seminar Seminar Seminar Aalto University Aalto University 2014/02/03 英語 口頭発表(招待・特別) 公開
Mining Metabolic Pathways through Gene Expression[招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] Seminar Seminar Seminar National University of Singapore National University of Singapore 2013/12/20 英語 口頭発表(招待・特別) 公開
Label Propagation over Graphs[招待あり] Label Propagation over Graphs [招待あり] Label Propagation over Graphs [招待あり] Seminar Seminar Seminar Institute for Infocomm Research (I2R), A*STAR, Singapore Institute for Infocomm Research (I2R), A*STAR, Singapore 2013/12/19 英語 口頭発表(招待・特別) 公開
Efficiently Detecting Switching Mechanisms in Gene Expression[招待あり] Efficiently Detecting Switching Mechanisms in Gene Expression [招待あり] Efficiently Detecting Switching Mechanisms in Gene Expression [招待あり] 24th International Conference on Genome Informatics (GIW 2013) 24th International Conference on Genome Informatics (GIW 2013) 24th International Conference on Genome Informatics (GIW 2013) 2013/12/17 英語 口頭発表(招待・特別) 公開
Introduction of Institute for Chemical Research, Kyoto University[招待あり] Introduction of Institute for Chemical Research, Kyoto University [招待あり] Introduction of Institute for Chemical Research, Kyoto University [招待あり] The HUPO Initiative Assembly in Kyoto The HUPO Initiative Assembly in Kyoto The HUPO Initiative Assembly in Kyoto HUPO HUPO 2013/09/19 英語 口頭発表(招待・特別) 公開
Mining Significant Substructure Pairs from Drug-Target Network[招待あり] Mining Significant Substructure Pairs from Drug-Target Network [招待あり] 日本バイオインフォマティクス学会 第17回創薬インフォマティクス研究会 日本バイオインフォマティクス学会 第17回創薬インフォマティクス研究会 2013/09/11 日本語 口頭発表(招待・特別) 公開
Mining Metabolic Pathways through Gene Expression[招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] Kyoto University - Koc University Symposium ``New Frontiers in Health Sciences & Technologies" Kyoto University - Koc University Symposium ``New Frontiers in Health Sciences & Technologies" Kyoto University - Koc University Symposium ``New Frontiers in Health Sciences & Technologies" Kyoto University Kyoto University 2013/09/07 英語 口頭発表(招待・特別) 公開
Opening Remark Opening Remark Opening Remark 2013 International Workshop on Machine Learning and Applications to Biology 2013 International Workshop on Machine Learning and Applications to Biology 2013 International Workshop on Machine Learning and Applications to Biology Hokkaido University Hokkaido University 2013/08/05 英語 口頭発表(招待・特別) 公開
Opening and Closing Remarks Opening and Closing Remarks Opening and Closing Remarks 13th Annual International Workshop on Bioinformatics and Systems Biology 13th Annual International Workshop on Bioinformatics and Systems Biology 13th Annual International Workshop on Bioinformatics and Systems Biology 2013/07/31 英語 口頭発表(招待・特別) 公開
Machine Learning for Bioinformatics[招待あり] Machine Learning for Bioinformatics [招待あり] Machine Learning for Bioinformatics [招待あり] FASEB Science and Research Conference, ``The Biology of Calpains in Health and Disease'' FASEB Science and Research Conference, ``The Biology of Calpains in Health and Disease'' FASEB Science and Research Conference, ``The Biology of Calpains in Health and Disease'' Federation of American Societies for Experimental Biology (FASEB) Federation of American Societies for Experimental Biology (FASEB) 2013/07/22 英語 口頭発表(招待・特別) 公開
Label Propagation over Graphs[招待あり] Label Propagation over Graphs [招待あり] Label Propagation over Graphs [招待あり] Seminar Seminar Seminar Mitsubishi Electric Research Laboratories Mitsubishi Electric Research Laboratories 2013/03/08 英語 口頭発表(招待・特別) 公開
Mining Metabolic Pathways through Gene Expression[招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] 日本バイオインフォマティクス学会 九州地域部会 セミナー 日本バイオインフォマティクス学会 九州地域部会 セミナー 九州大学生体防御医学研究所セミナー 九州大学生体防御医学研究所セミナー 2013/02/08 日本語 口頭発表(招待・特別) 公開
Mining Metabolic Pathways through Gene Expression[招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] 第1回JHUPOサテライトシンポジウム 第1回JHUPOサテライトシンポジウム 2013/01/18 日本語 口頭発表(招待・特別) 公開
Label Propagation over Graphs[招待あり] Label Propagation over Graphs [招待あり] Label Propagation over Graphs [招待あり] Seminar Seminar Seminar Noah's Ark Lab, Huawei Noah's Ark Lab, Huawei 2012/12/17 英語 口頭発表(招待・特別) 公開
Mining Metabolic Pathways through Gene Expression[招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] Kyoto University - Durham University Joint International Symposium Kyoto University - Durham University Joint International Symposium Kyoto University - Durham University Joint International Symposium 2012/11/28 英語 口頭発表(招待・特別) 公開
遺伝子発現データ解析 —スイッチング機構の発見とパスウェイマイニング—[招待あり] 遺伝子発現データ解析 —スイッチング機構の発見とパスウェイマイニング— [招待あり] 第15回新潟プロテオミクスフォーラム 第15回新潟プロテオミクスフォーラム 新潟 新潟 2012/11/20 日本語 口頭発表(招待・特別) 公開
Label Propagation over Graphs[招待あり] Label Propagation over Graphs [招待あり] Label Propagation over Graphs [招待あり] Seminar Seminar Seminar IBM T. J. Watson Research Center IBM T. J. Watson Research Center 2012/10/08 英語 口頭発表(招待・特別) 公開
Mining Subgraph-Subsequence Pairs from Drug-Target Network[招待あり] Mining Subgraph-Subsequence Pairs from Drug-Target Network [招待あり] Mining Subgraph-Subsequence Pairs from Drug-Target Network [招待あり] 2012 Workshop on Pharmaco-Informatics for Drug Discovery, in Conjunction with 2012 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2012) 2012 Workshop on Pharmaco-Informatics for Drug Discovery, in Conjunction with 2012 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2012) 2012 Workshop on Pharmaco-Informatics for Drug Discovery, in Conjunction with 2012 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2012) Computer Society, IEEE Computer Society, IEEE 2012/10/04 英語 口頭発表(招待・特別) 公開
Opening Remark[招待あり] Opening Remark [招待あり] Opening Remark [招待あり] 2012 Sapporo Workshop on Machine Learning and Application to Biology (MLAB) 2012 Sapporo Workshop on Machine Learning and Application to Biology (MLAB) 2012 Sapporo Workshop on Machine Learning and Application to Biology (MLAB) Hokkaido University Hokkaido University 2012/08/06 英語 口頭発表(招待・特別) 公開
Machine Learning for Systems Biology[招待あり] Machine Learning for Systems Biology [招待あり] Machine Learning for Systems Biology [招待あり] Faculty Lab Presentation, International Workshop of Bioinformatics and Systems Biology 2012 Faculty Lab Presentation, International Workshop of Bioinformatics and Systems Biology 2012 Faculty Lab Presentation, International Workshop of Bioinformatics and Systems Biology 2012 Boston University Boston University 2012/07/26 英語 口頭発表(招待・特別) 公開
Efficiently Detecting Switching Mechanisms in Gene Expression[招待あり] Efficiently Detecting Switching Mechanisms in Gene Expression [招待あり] セミナー セミナー 協和発酵キリン株式会社 探索研究所 協和発酵キリン株式会社 探索研究所 2012/02/02 日本語 口頭発表(招待・特別) 公開
薬剤−ターゲットネットワークからの部分構造パタン検出と解析[招待あり] 薬剤−ターゲットネットワークからの部分構造パタン検出と解析 [招待あり] 高知大学大学院医学専攻DCセミナー(大学院公開セミナー) 高知大学大学院医学専攻DCセミナー(大学院公開セミナー) 高知大学医学部 高知大学医学部 2012/01/30 日本語 口頭発表(招待・特別) 公開
Clustering over Graphs: Probabilistic Model based Approach[招待あり] Clustering over Graphs: Probabilistic Model based Approach [招待あり] Clustering over Graphs: Probabilistic Model based Approach [招待あり] Seminar in Information Systems and Applications Seminar in Information Systems and Applications Seminar in Information Systems and Applications National Tsing Hua University National Tsing Hua University 2011/11/23 英語 口頭発表(招待・特別) 公開
Label Propagation over Graphs Label Propagation over Graphs Label Propagation over Graphs Seminar, National Tsing Hua University Seminar, National Tsing Hua University Seminar, National Tsing Hua University National Tsing Hua University National Tsing Hua University 2011/11/22 英語 口頭発表(招待・特別) 公開
Efficient Label Propagation over Graphs Efficient Label Propagation over Graphs Efficient Label Propagation over Graphs Seminar Seminar Seminar Fudan University Fudan University 2011/11/14 英語 口頭発表(招待・特別) 公開
Data Mining-based Approach for Drug-Target Prediction[招待あり] Data Mining-based Approach for Drug-Target Prediction [招待あり] Data Mining-based Approach for Drug-Target Prediction [招待あり] Invited Tutorial, 2011 International Conference on Neural Information Processing (ICONIP), Tutorials Invited Tutorial, 2011 International Conference on Neural Information Processing (ICONIP), Tutorials Invited Tutorial, 2011 International Conference on Neural Information Processing (ICONIP), Tutorials 2011/11/13 英語 口頭発表(招待・特別) 公開
生命科学上の非構造化データからのマイニング[招待あり] 生命科学上の非構造化データからのマイニング [招待あり] 第13回新潟プロテオミクスフォーラム 第13回新潟プロテオミクスフォーラム 2011/10/26 日本語 口頭発表(招待・特別) 公開
Opening Remark[招待あり] Opening Remark [招待あり] Opening Remark [招待あり] ICR Symposium to Celebrate the Bioinformatics Center's 10 Year Anniversary and New Restructuring ICR Symposium to Celebrate the Bioinformatics Center's 10 Year Anniversary and New Restructuring ICR Symposium to Celebrate the Bioinformatics Center's 10 Year Anniversary and New Restructuring Institute for Chemical Research (ICR), Kyoto University Institute for Chemical Research (ICR), Kyoto University 2011/08/29 英語 口頭発表(招待・特別) 公開
Mining from Graphs[招待あり] Mining from Graphs [招待あり] Mining from Graphs [招待あり] FICS Summer School FICS Summer School FICS Summer School Finnish Doctoral Programme in Computational Sciences (FICS) Finnish Doctoral Programme in Computational Sciences (FICS) 2011/08/24 英語 口頭発表(基調) 公開
代謝ネットワークからのマイニング[招待あり] 代謝ネットワークからのマイニング [招待あり] 教育セミナー、日本プロテオーム学会2011年大会 教育セミナー、日本プロテオーム学会2011年大会 2011/07/28 日本語 口頭発表(招待・特別) 公開
Probabilistic Models for Labelled Ordered Trees: Applications to Glycans Probabilistic Models for Labelled Ordered Trees: Applications to Glycans Probabilistic Models for Labelled Ordered Trees: Applications to Glycans Summer School 2011 Summer School 2011 Summer School 2011 Computational Systems Biology, DFG-GRADUIERTENKOLLEG 1772 - Research Training Group Computational Systems Biology, DFG-GRADUIERTENKOLLEG 1772 - Research Training Group 2011/07/22 英語 口頭発表(招待・特別) 公開
Mining Significant Substructure Pairs from Drug-Target Network[招待あり] Mining Significant Substructure Pairs from Drug-Target Network [招待あり] セミナー セミナー 協和発酵キリン株式会社 探索研究所 協和発酵キリン株式会社 探索研究所 2011/06/21 日本語 口頭発表(招待・特別) 公開
Mining Significant Substructure Pairs from Drug-Target Network Mining Significant Substructure Pairs from Drug-Target Network Mining Significant Substructure Pairs from Drug-Target Network Seminar Seminar Seminar University of Strasbourg University of Strasbourg 2011/05/26 英語 口頭発表(招待・特別) 公開
PathRanker: Mining Metabolic Pathways through Gene Expression[招待あり] PathRanker: Mining Metabolic Pathways through Gene Expression [招待あり] PathRanker: Mining Metabolic Pathways through Gene Expression [招待あり] Seminar Seminar Seminar Institute of Genetics and Molecular and Cellular Biology (IGBMC), University of Strasbourg Institute of Genetics and Molecular and Cellular Biology (IGBMC), University of Strasbourg 2011/05/24 英語 口頭発表(招待・特別) 公開
Mining Significant Substructure Pairs from Drug-Target Network[招待あり] Mining Significant Substructure Pairs from Drug-Target Network [招待あり] Mining Significant Substructure Pairs from Drug-Target Network [招待あり] Seminar Seminar Seminar Fudan University Fudan University 2011/05/16 英語 口頭発表(招待・特別) 公開
Mining Metabolic Pathways through Gene Expression[招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] The 2nd Workshop on Bioinformatics for Medical and Pharmaceutical Research The 2nd Workshop on Bioinformatics for Medical and Pharmaceutical Research The 2nd Workshop on Bioinformatics for Medical and Pharmaceutical Research Curie Institute Curie Institute 2011/02/28 英語 口頭発表(招待・特別) 公開
Mining Metabolic Pathways through Gene Expression[招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] Seminar Seminar Seminar Humboldt University, Computational Systems Biology, DFG-GRADUIERTENKOLLEG 1772 - Research Training Group Humboldt University, Computational Systems Biology, DFG-GRADUIERTENKOLLEG 1772 - Research Training Group 2011/02/23 英語 口頭発表(招待・特別) 公開
Clustering over Graphs: Probabilistic Model based Approach[招待あり] Clustering over Graphs: Probabilistic Model based Approach [招待あり] Clustering over Graphs: Probabilistic Model based Approach [招待あり] Seminar Seminar Seminar National Cheng Kung University National Cheng Kung University 2011/01/20 英語 口頭発表(招待・特別) 公開
Clustering Genes by Using Expression and Gene Network Topology[招待あり] Clustering Genes by Using Expression and Gene Network Topology [招待あり] Clustering Genes by Using Expression and Gene Network Topology [招待あり] Seminar Seminar Seminar National Cheng Kung University National Cheng Kung University 2011/01/19 英語 口頭発表(招待・特別) 公開
Mining Metabolic Pathways through Gene Expression[招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] Seminar Seminar Seminar Fudan University Fudan University 2010/12/30 英語 口頭発表(招待・特別) 公開
Clustering over Graphs: Probabilistic Model Based Approach[招待あり] Clustering over Graphs: Probabilistic Model Based Approach [招待あり] Clustering over Graphs: Probabilistic Model Based Approach [招待あり] Seminar Seminar Seminar Shanghai Jiao Tong University Shanghai Jiao Tong University 2010/12/28 英語 口頭発表(招待・特別) 公開
Mining Metabolic Pathways through Gene Expression[招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] Seminar Seminar Seminar Shanghai Institutes for Biological Sciences Shanghai Institutes for Biological Sciences 2010/12/27 英語 口頭発表(招待・特別) 公開
Mining Metabolic Pathways through Gene Expression[招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] Seminar Seminar Seminar Boston College Boston College 2010/12/10 英語 口頭発表(招待・特別) 公開
Clustering Genes by Using Expression and Gene Network Topology[招待あり] Clustering Genes by Using Expression and Gene Network Topology [招待あり] Clustering Genes by Using Expression and Gene Network Topology [招待あり] Seminar Seminar Seminar Boston University Boston University 2010/12/08 英語 口頭発表(招待・特別) 公開
生命科学上の非構造化データの統合マイニング 生命科学上の非構造化データの統合マイニング バイオインフォマティクス推進センター事業、第６回研究開発成果報告会 バイオインフォマティクス推進センター事業、第６回研究開発成果報告会 品川 品川 2010/11/10 日本語 口頭発表(招待・特別) 公開
Mining Metabolic Pathways through Gene Expression[招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] Mining Metabolic Pathways through Gene Expression [招待あり] 2010 Systems Biology and Bioinformatics Symposium (SBBS) 2010 Systems Biology and Bioinformatics Symposium (SBBS) 2010 Systems Biology and Bioinformatics Symposium (SBBS) Taiwan Society for Bioinformatics and Systems Biology (TBSB) Taiwan Society for Bioinformatics and Systems Biology (TBSB) 2010/11/05 英語 口頭発表(基調) 公開
ライフサイエンスデータからのマイニング ライフサイエンスデータからのマイニング 第17回京都大学化学研究所 公開講演会 第17回京都大学化学研究所 公開講演会 2010/10/24 日本語 口頭発表(招待・特別) 公開
Probabilistic Model Learning for Clustering with Multiple Graphs[招待あり] Probabilistic Model Learning for Clustering with Multiple Graphs [招待あり] Probabilistic Model Learning for Clustering with Multiple Graphs [招待あり] Seminar Seminar Seminar Fudan University Fudan University 2010/10/18 英語 口頭発表(招待・特別) 公開
Probabilistic Model Learning for Clustering with Multiple Graphs[招待あり] Probabilistic Model Learning for Clustering with Multiple Graphs [招待あり] Probabilistic Model Learning for Clustering with Multiple Graphs [招待あり] Seminar Seminar Seminar SooChow University SooChow University 2010/10/15 英語 口頭発表(招待・特別) 公開
Clustering over Graphs[招待あり] Clustering over Graphs [招待あり] Clustering over Graphs [招待あり] Second International Seminar on Business and Information Management (ISBIM 2010) Second International Seminar on Business and Information Management (ISBIM 2010) Second International Seminar on Business and Information Management (ISBIM 2010) 2010/09/13 英語 口頭発表(基調) 公開
ネットワークからの遺伝子クラスタリング[招待あり] ネットワークからの遺伝子クラスタリング [招待あり] 公開シンポジウム“統合複雑系科学への招待” 公開シンポジウム“統合複雑系科学への招待” 2010/08/05 日本語 口頭発表(招待・特別) 公開
Ranking Metabolic Paths Based on Adjacent Pairwise Coexpression[招待あり] Ranking Metabolic Paths Based on Adjacent Pairwise Coexpression [招待あり] Ranking Metabolic Paths Based on Adjacent Pairwise Coexpression [招待あり] Seminar Seminar Seminar Fudan University Fudan University 2010/05/13 英語 口頭発表(招待・特別) 公開
Efficiently Detecting a Switching Mechanism in Gene Expression[招待あり] Efficiently Detecting a Switching Mechanism in Gene Expression [招待あり] Efficiently Detecting a Switching Mechanism in Gene Expression [招待あり] Seminar Seminar Seminar Curie Institute Curie Institute 2010/03/22 英語 口頭発表(招待・特別) 公開
Efficiently Finding a Switching Mechanism in Gene Expression[招待あり] Efficiently Finding a Switching Mechanism in Gene Expression [招待あり] Efficiently Finding a Switching Mechanism in Gene Expression [招待あり] Seminar Seminar Seminar Fudan University Fudan University 2010/03/16 英語 口頭発表(招待・特別) 公開
Mining patterns from trees - Probabilistic model-based approach[招待あり] Mining patterns from trees - Probabilistic model-based approach [招待あり] 日本バイオインフォマティクス学会 第９回北海道地域部会セミナー 日本バイオインフォマティクス学会 第９回北海道地域部会セミナー 北海道大学 北海道大学 2010/02/08 日本語 口頭発表(招待・特別) 公開
Mining Significant Patterns from Carbohydrate Sugar Chains[招待あり] Mining Significant Patterns from Carbohydrate Sugar Chains [招待あり] Mining Significant Patterns from Carbohydrate Sugar Chains [招待あり] Seminar Seminar Seminar Humboldt University Humboldt University 2009/10/09 英語 口頭発表(招待・特別) 公開
Mining Significant Patterns from Glycan Structures[招待あり] Mining Significant Patterns from Glycan Structures [招待あり] Mining Significant Patterns from Glycan Structures [招待あり] International Beilstein Symposium on Glyco-Bioinformatics International Beilstein Symposium on Glyco-Bioinformatics International Beilstein Symposium on Glyco-Bioinformatics Beilstein Institute Beilstein Institute 2009/10/05 英語 口頭発表(招待・特別) 公開
A Markov Classification Model for Metabolic Pathways[招待あり] A Markov Classification Model for Metabolic Pathways [招待あり] A Markov Classification Model for Metabolic Pathways [招待あり] Seminar Seminar Seminar Fudan University Fudan University 2009/09/29 英語 口頭発表(招待・特別) 公開
Mining Significant Patterns from Trees[招待あり] Mining Significant Patterns from Trees [招待あり] Mining Significant Patterns from Trees [招待あり] TISE Summer School on Statistical Modeling and Machine Leraning in Computational Systems Biology TISE Summer School on Statistical Modeling and Machine Leraning in Computational Systems Biology TISE Summer School on Statistical Modeling and Machine Leraning in Computational Systems Biology Tampere Graduate School in Information Science and Engineering (TISE) Tampere Graduate School in Information Science and Engineering (TISE) 2009/06/24 英語 口頭発表(招待・特別) 公開
Probabilistic Models for Mining from Labeled Ordered Trees: Application to Glycobiology[招待あり] Probabilistic Models for Mining from Labeled Ordered Trees: Application to Glycobiology [招待あり] Probabilistic Models for Mining from Labeled Ordered Trees: Application to Glycobiology [招待あり] TISE Summer School on Statistical Modeling and Machine Leraning in Computational Systems Biology TISE Summer School on Statistical Modeling and Machine Leraning in Computational Systems Biology TISE Summer School on Statistical Modeling and Machine Leraning in Computational Systems Biology Tampere Graduate School in Information Science and Engineering (TISE) Tampere Graduate School in Information Science and Engineering (TISE) 2009/06/24 英語 口頭発表(招待・特別) 公開
Learning Probabilistic Models for Time-series Data: Hidden Markov Models[招待あり] Learning Probabilistic Models for Time-series Data: Hidden Markov Models [招待あり] Learning Probabilistic Models for Time-series Data: Hidden Markov Models [招待あり] TISE Summer School on Statistical Modeling and Machine Leraning in Computational Systems Biology TISE Summer School on Statistical Modeling and Machine Leraning in Computational Systems Biology TISE Summer School on Statistical Modeling and Machine Leraning in Computational Systems Biology Tampere Graduate School in Information Science and Engineering (TISE) Tampere Graduate School in Information Science and Engineering (TISE) 2009/06/22 英語 口頭発表(招待・特別) 公開
Clustering with Heterogeneous Data[招待あり] Clustering with Heterogeneous Data [招待あり] Clustering with Heterogeneous Data [招待あり] IEEE International Conference on Computational Intelligence and Natural Computing (CINC 2009) IEEE International Conference on Computational Intelligence and Natural Computing (CINC 2009) IEEE International Conference on Computational Intelligence and Natural Computing (CINC 2009) 2009/06/06 英語 口頭発表(基調) 公開
Mining Significant Patterns from Trees[招待あり] Mining Significant Patterns from Trees [招待あり] Mining Significant Patterns from Trees [招待あり] Seminar Seminar Seminar Universit? Louis Pasteur Universit? Louis Pasteur 2009/05/28 英語 口頭発表(招待・特別) 公開
A Probabilistic Model-based Approach for Mining Chemical Compound-Gene Co-occurrences from Biomedical Texts[招待あり] A Probabilistic Model-based Approach for Mining Chemical Compound-Gene Co-occurrences from Biomedical Texts [招待あり] A Probabilistic Model-based Approach for Mining Chemical Compound-Gene Co-occurrences from Biomedical Texts [招待あり] Seminar Seminar Seminar Universit? Louis Pasteur Universit? Louis Pasteur 2009/05/25 英語 口頭発表(招待・特別) 公開
Mining Significant Patterns from Trees[招待あり] Mining Significant Patterns from Trees [招待あり] Mining Significant Patterns from Trees [招待あり] Bioinformatics Workshop Bioinformatics Workshop Bioinformatics Workshop Shanghai Key Laboratory of Intelligent Information Processing Shanghai Key Laboratory of Intelligent Information Processing 2009/05/13 英語 口頭発表(招待・特別) 公開
Mining Significant Patterns from Trees[招待あり] Mining Significant Patterns from Trees [招待あり] Mining Significant Patterns from Trees [招待あり] Seminar Seminar Seminar I2R, A*STAR, Singapore I2R, A*STAR, Singapore 2009/03/24 英語 口頭発表(招待・特別) 公開
発現情報に基づく効率的な代謝経路ランキング手法を適用したリグニン生合成経路解析[招待あり] 発現情報に基づく効率的な代謝経路ランキング手法を適用したリグニン生合成経路解析 [招待あり] 科研費ワークショップ「生薬とバイオインフォマティクス」 科研費ワークショップ「生薬とバイオインフォマティクス」 2009/01/15 日本語 口頭発表(招待・特別) 公開
Mining Significant Patterns from Trees[招待あり] Mining Significant Patterns from Trees [招待あり] Mining Significant Patterns from Trees [招待あり] IEEE International Symposium on Knowledge Acquisition and Modeling (KAM 2008) IEEE International Symposium on Knowledge Acquisition and Modeling (KAM 2008) IEEE International Symposium on Knowledge Acquisition and Modeling (KAM 2008) Beijin Section, IEEE; HuaZhong Normal Uniersity Beijin Section, IEEE; HuaZhong Normal Uniersity 2008/12/21 英語 口頭発表(基調) 公開
Clustering Genes with Microarray Expressions and Gene Networks[招待あり] Clustering Genes with Microarray Expressions and Gene Networks [招待あり] Clustering Genes with Microarray Expressions and Gene Networks [招待あり] Seminar Seminar Seminar Max Planck Institute for Biological Cybernetics Max Planck Institute for Biological Cybernetics 2008/10/22 英語 口頭発表(招待・特別) 公開
半構造化データからのマイニング[招待あり] 半構造化データからのマイニング [招待あり] 葉山セミナー 葉山セミナー 総合研究大学院大学先導科学研究科 総合研究大学院大学先導科学研究科 2008/10/14 日本語 口頭発表(招待・特別) 公開
Clustering Numerical Vectors with a Modularity Network[招待あり] Clustering Numerical Vectors with a Modularity Network [招待あり] Clustering Numerical Vectors with a Modularity Network [招待あり] Workshop on "Relations with Computer Science", Foundations of Computational Mathematics (FoCM'08) Workshop on "Relations with Computer Science", Foundations of Computational Mathematics (FoCM'08) Workshop on "Relations with Computer Science", Foundations of Computational Mathematics (FoCM'08) 2008/06/22 英語 口頭発表(招待・特別) 公開
ベクトル形式データとネットワークデータを統合したクラスタリング[招待あり] ベクトル形式データとネットワークデータを統合したクラスタリング [招待あり] 電子情報通信学会「パターン認識・メディア理解研究会」「データ工学研究会」共催、2008年6月研究会 電子情報通信学会「パターン認識・メディア理解研究会」「データ工学研究会」共催、2008年6月研究会 電子情報通信学会 電子情報通信学会 2008/06/19 日本語 口頭発表(招待・特別) 公開
Clustering Numerical Vectors with a Modularity Network[招待あり] Clustering Numerical Vectors with a Modularity Network [招待あり] セミナー セミナー 奈良先端科学技術大学院大学 奈良先端科学技術大学院大学 2008/06/17 日本語 口頭発表(招待・特別) 公開
Clustering Numerical Vectors with a Modularity Network[招待あり] Clustering Numerical Vectors with a Modularity Network [招待あり] Clustering Numerical Vectors with a Modularity Network [招待あり] Seminar Seminar Seminar University of Melbourne University of Melbourne 2008/05/27 英語 口頭発表(招待・特別) 公開
Data-integrative Informatics for Chemical Genomics[招待あり] Data-integrative Informatics for Chemical Genomics [招待あり] Data-integrative Informatics for Chemical Genomics [招待あり] Systems Biology Workshops - From Molecules to Life - Systems Biology Workshops - From Molecules to Life - Systems Biology Workshops - From Molecules to Life - 2008/05/27 英語 口頭発表(基調) 公開
Clustering Numerical Vectors with Modularity Networks[招待あり] Clustering Numerical Vectors with Modularity Networks [招待あり] Clustering Numerical Vectors with Modularity Networks [招待あり] Seminar Seminar Seminar Helsinki University of Technology Helsinki University of Technology 2007/12/13 英語 口頭発表(招待・特別) 公開
Opening Address[招待あり] Opening Address [招待あり] Opening Address [招待あり] Eighteenth International Conference on Genome Informatics Eighteenth International Conference on Genome Informatics Eighteenth International Conference on Genome Informatics 2007/12/03 英語 口頭発表(招待・特別) 公開
An Integrative Approach for Gene Annotation based on Spectral Clustering and Network Modularity[招待あり] An Integrative Approach for Gene Annotation based on Spectral Clustering and Network Modularity [招待あり] An Integrative Approach for Gene Annotation based on Spectral Clustering and Network Modularity [招待あり] AASBi Symposium AASBi Symposium AASBi Symposium The Association of Asian Societies for Bioinformatics (AASBi) The Association of Asian Societies for Bioinformatics (AASBi) 2007/12/02 英語 口頭発表(招待・特別) 公開
Clustering Numerical Vectors with Modularity Networks[招待あり] Clustering Numerical Vectors with Modularity Networks [招待あり] Clustering Numerical Vectors with Modularity Networks [招待あり] Seminar Seminar Seminar Institute for Infocomm Research (I2R), A*STAR, Singapore Institute for Infocomm Research (I2R), A*STAR, Singapore 2007/11/28 英語 口頭発表(招待・特別) 公開
Informatics Innovations in Glycogenomics[招待あり] Informatics Innovations in Glycogenomics [招待あり] 21世紀COEプログラム「ゲノム科学の知的情報基盤・研究拠点形成」最終年度公 開シンポジウム：Symposium on Bioinformatics and Chemical Genomics 21世紀COEプログラム「ゲノム科学の知的情報基盤・研究拠点形成」最終年度公 開シンポジウム：Symposium on Bioinformatics and Chemical Genomics 21世紀COEプログラム「ゲノム科学の知的情報基盤・研究拠点形成」 21世紀COEプログラム「ゲノム科学の知的情報基盤・研究拠点形成」 2007/09/20 日本語 口頭発表(招待・特別) 公開
Random Field, Network Modularity, Spectral Clustering and Beyond[招待あり] Random Field, Network Modularity, Spectral Clustering and Beyond [招待あり] Random Field, Network Modularity, Spectral Clustering and Beyond [招待あり] International Conference on Intelligent Computing (ICIC 2007) International Conference on Intelligent Computing (ICIC 2007) International Conference on Intelligent Computing (ICIC 2007) 2007/08/22 英語 口頭発表(基調) 公開
Clustering Numerical Vectors with a Modular Network[招待あり] Clustering Numerical Vectors with a Modular Network [招待あり] Clustering Numerical Vectors with a Modular Network [招待あり] Seminar Seminar Seminar University of California, Berkeley University of California, Berkeley 2007/08/10 英語 口頭発表(招待・特別) 公開
Closing Remark[招待あり] Closing Remark [招待あり] Closing Remark [招待あり] International Symposium on Bioinformatics Education and Research International Symposium on Bioinformatics Education and Research International Symposium on Bioinformatics Education and Research Education and Research Organization for Genome Information Science Education and Research Organization for Genome Information Science 2006/12/17 英語 口頭発表(招待・特別) 公開
A Probabilistic Model for Mining Labeled Ordered Trees and Its Application to Capturing Patterns in Carbohydrate Sugar Chains[招待あり] A Probabilistic Model for Mining Labeled Ordered Trees and Its Application to Capturing Patterns in Carbohydrate Sugar Chains [招待あり] A Probabilistic Model for Mining Labeled Ordered Trees and Its Application to Capturing Patterns in Carbohydrate Sugar Chains [招待あり] International Workshop on Scientific Computing: Models, Algorithms and Applications International Workshop on Scientific Computing: Models, Algorithms and Applications International Workshop on Scientific Computing: Models, Algorithms and Applications 2006/12/08 英語 口頭発表(招待・特別) 公開
Learning a Probabilistic Model for Labeled Ordered Trees[招待あり] Learning a Probabilistic Model for Labeled Ordered Trees [招待あり] Learning a Probabilistic Model for Labeled Ordered Trees [招待あり] Second Japan-Taiwan Bilateral Symposium on Bioinformatics Second Japan-Taiwan Bilateral Symposium on Bioinformatics Second Japan-Taiwan Bilateral Symposium on Bioinformatics Interchange Association Interchange Association 2006/11/09 英語 口頭発表(招待・特別) 公開
Learning Probabilistic Models for Mining Labeled Ordered Trees[招待あり] Learning Probabilistic Models for Mining Labeled Ordered Trees [招待あり] Learning Probabilistic Models for Mining Labeled Ordered Trees [招待あり] Third Japanese-German Frontiers of Sciences Symposium Third Japanese-German Frontiers of Sciences Symposium Third Japanese-German Frontiers of Sciences Symposium https://www.humboldt-foundation.de/web/5060.html https://www.humboldt-foundation.de/web/5060.html 2006/11/03 英語 口頭発表(招待・特別) 公開
バイオインフォマティクス先端技術の現状と展望[招待あり] バイオインフォマティクス先端技術の現状と展望 [招待あり] セミナー セミナー 協和発酵工業 バイオフロンティア研究所 協和発酵工業 バイオフロンティア研究所 2006/09/26 日本語 口頭発表(招待・特別) 公開
A New Probabilistic Model for Mining Labeled Ordered Trees[招待あり] A New Probabilistic Model for Mining Labeled Ordered Trees [招待あり] A New Probabilistic Model for Mining Labeled Ordered Trees [招待あり] Seminar Seminar Seminar IBM T. J. Watson Research Center IBM T. J. Watson Research Center 2006/08/24 英語 口頭発表(招待・特別) 公開
能動学習を用いた効率的なMHC結合ペプチド予測[招待あり] 能動学習を用いた効率的なMHC結合ペプチド予測 [招待あり] 臨床研セミナー 臨床研セミナー 東京都臨床医学総合研究所 東京都臨床医学総合研究所 2006/05/25 日本語 口頭発表(招待・特別) 公開
Biological Sequence Analysis with a Probabilistic Model[招待あり] Biological Sequence Analysis with a Probabilistic Model [招待あり] セミナー セミナー 千葉大学 千葉大学 2006/03/28 日本語 口頭発表(招待・特別) 公開
Probabilistic Model for Mining Labeled Ordered Trees: Capturing Patterns in Carbohydrate Sugar Chains[招待あり] Probabilistic Model for Mining Labeled Ordered Trees: Capturing Patterns in Carbohydrate Sugar Chains [招待あり] Probabilistic Model for Mining Labeled Ordered Trees: Capturing Patterns in Carbohydrate Sugar Chains [招待あり] Seminar Seminar Seminar National University of Singapore National University of Singapore 2006/03/23 英語 口頭発表(招待・特別) 公開
Probabilistic Model for Mining Labeled Ordered Trees: Capturing Patterns in Carbohydrate Sugar Chains[招待あり] Probabilistic Model for Mining Labeled Ordered Trees: Capturing Patterns in Carbohydrate Sugar Chains [招待あり] Probabilistic Model for Mining Labeled Ordered Trees: Capturing Patterns in Carbohydrate Sugar Chains [招待あり] Seminar Seminar Seminar Institute for Infocomm Research (I2R), A*STAR, Singapore Institute for Infocomm Research (I2R), A*STAR, Singapore 2006/03/21 英語 口頭発表(招待・特別) 公開
A Probabilistic Model-based Approach for Biomedical Text Mining[招待あり] A Probabilistic Model-based Approach for Biomedical Text Mining [招待あり] A Probabilistic Model-based Approach for Biomedical Text Mining [招待あり] First Japan-Taiwan Bilateral Symposium on Bioinformatics First Japan-Taiwan Bilateral Symposium on Bioinformatics First Japan-Taiwan Bilateral Symposium on Bioinformatics Interchange Association Interchange Association 2006/03/14 英語 口頭発表(招待・特別) 公開
Opening Remark[招待あり] Opening Remark [招待あり] Opening Remark [招待あり] Sixteenth International Conference on Genome Informatics Sixteenth International Conference on Genome Informatics Sixteenth International Conference on Genome Informatics 2005/12/19 英語 口頭発表(招待・特別) 公開
バイオインフォマティクス人材養成のあるべき姿とは？[招待あり] バイオインフォマティクス人材養成のあるべき姿とは？ [招待あり] 産業技術総合研究所 生命情報科学人材養成コース 最終シンポジウム「バイオインフォマティクス人材養成5年の歩み お台場から世界に向けて」 産業技術総合研究所 生命情報科学人材養成コース 最終シンポジウム「バイオインフォマティクス人材養成5年の歩み お台場から世界に向けて」 産業技術総合研究所 生命情報科学センター 産業技術総合研究所 生命情報科学センター 2005/09/22 日本語 シンポジウム・ワークショップパネル(指名) 公開
マルコフ連鎖の有限混合モデルによるマイクロアレイデータからの代謝パスウェイ解析[招待あり] マルコフ連鎖の有限混合モデルによるマイクロアレイデータからの代謝パスウェイ解析 [招待あり] 統計関連学会連合大会企画セッション「アレイデータ解析周辺にみる新しい統計的視点」 統計関連学会連合大会企画セッション「アレイデータ解析周辺にみる新しい統計的視点」 2005/09/13 日本語 口頭発表(招待・特別) 公開
バイオインフォマティクス先端技術の現状と展望[招待あり] バイオインフォマティクス先端技術の現状と展望 [招待あり] セミナー セミナー シスメックス株式会社中央研究所・テクノセンター シスメックス株式会社中央研究所・テクノセンター 2005/06/27 日本語 口頭発表(招待・特別) 公開
バイオインフォマティクス先端技術の現状と展望[招待あり] バイオインフォマティクス先端技術の現状と展望 [招待あり] セミナー セミナー キリンビール株式会社 医薬探索研究所 キリンビール株式会社 医薬探索研究所 2005/06/25 日本語 口頭発表(招待・特別) 公開
糖鎖構造からのデータマイニング[招待あり] 糖鎖構造からのデータマイニング [招待あり] 公開シンポジウム「ゲノムからケミカルゲノムへ」 公開シンポジウム「ゲノムからケミカルゲノムへ」 京都大学21世紀COEプログラム「ゲノム科学の知的情報基盤・研究拠点形成」 京都大学21世紀COEプログラム「ゲノム科学の知的情報基盤・研究拠点形成」 2005/03/24 日本語 口頭発表(招待・特別) 公開
糖鎖構造からのデータマイニング[招待あり] 糖鎖構造からのデータマイニング [招待あり] セミナー セミナー 日本電気（株） 日本電気（株） 2005/03/02 日本語 口頭発表(招待・特別) 公開
代謝パスウェイの発現プロファイルによる解析[招待あり] 代謝パスウェイの発現プロファイルによる解析 [招待あり] 第27回日本分子生物学会年会ワークショップ 第27回日本分子生物学会年会ワークショップ 2004/12/09 日本語 口頭発表(招待・特別) 公開
バイオインフォマティクスへの機械学習応用[招待あり] バイオインフォマティクスへの機械学習応用 [招待あり] バイオインフォマティクス夏の学校 バイオインフォマティクス夏の学校 日本バイオインフォマティクス学会 日本バイオインフォマティクス学会 2004/07/21 日本語 口頭発表(招待・特別) 公開
プロテオームインフォマティクスの現状と展望[招待あり] プロテオームインフォマティクスの現状と展望 [招待あり] 日本SGIソリューションフェア2003 日本SGIソリューションフェア2003 日本SGI 日本SGI 2003/11/05 日本語 口頭発表(招待・特別) 公開
ゲノム・プロテオーム情報のデータマイニング[招待あり] ゲノム・プロテオーム情報のデータマイニング [招待あり] 京都市酒蔵バイオＶＩＬ開所一周年記念事業 「21世紀COEシンポジウム」 京都市酒蔵バイオＶＩＬ開所一周年記念事業 「21世紀COEシンポジウム」 京都大学21世紀COEプログラム「ゲノム科学の知的情報基盤・研究拠点形成」 京都大学21世紀COEプログラム「ゲノム科学の知的情報基盤・研究拠点形成」 2003/08/11 日本語 口頭発表(招待・特別) 公開
Hierarchical Latent Knowledge Analysis on Co-occurrence Data[招待あり] Hierarchical Latent Knowledge Analysis on Co-occurrence Data [招待あり] 情報処理学会、電子情報通信学会北海道支部共催講演会 情報処理学会、電子情報通信学会北海道支部共催講演会 情報処理学会、電子情報通信学会 情報処理学会、電子情報通信学会 2003/06/24 日本語 口頭発表(招待・特別) 公開
潜在変数モデルによるタンパク質相互作用の予測[招待あり] 潜在変数モデルによるタンパク質相互作用の予測 [招待あり] 第３回日本蛋白質科学会年会ワークショップ（プロテインインフォマティクス） 第３回日本蛋白質科学会年会ワークショップ（プロテインインフォマティクス） 日本蛋白質科学会 日本蛋白質科学会 2003/06/23 日本語 口頭発表(招待・特別) 公開
階層型潜在変数モデルによるタンパク質間相互作用の予測[招待あり] 階層型潜在変数モデルによるタンパク質間相互作用の予測 [招待あり] 第１回「高次構造からみるプロテオーム機能発現メカニズム」研究会 第１回「高次構造からみるプロテオーム機能発現メカニズム」研究会 2003/05/21 日本語 口頭発表(招待・特別) 公開
Predicting Protein-Protein Interactions with Latent Variable Models[招待あり] Predicting Protein-Protein Interactions with Latent Variable Models [招待あり] Predicting Protein-Protein Interactions with Latent Variable Models [招待あり] Second Asian Joint Workshop on Protein Informatics Second Asian Joint Workshop on Protein Informatics Second Asian Joint Workshop on Protein Informatics 2003/02/27 英語 口頭発表(招待・特別) 公開
プロテオーム情報と低分子化合物情報の効率的な解析[招待あり] プロテオーム情報と低分子化合物情報の効率的な解析 [招待あり] 人工知能学会第23回分子生物情報研究会 人工知能学会第23回分子生物情報研究会 人工知能学会 人工知能学会 2003/01/20 日本語 口頭発表(招待・特別) 公開
Active Ensemble Learning[招待あり] Active Ensemble Learning [招待あり] セミナー(コロキウム) セミナー(コロキウム) 京都大学化学研究所附属バイオインフォマティクスセンター 京都大学化学研究所附属バイオインフォマティクスセンター 2002/03/10 日本語 口頭発表(招待・特別) 公開
Active Ensemble Learning[招待あり] Active Ensemble Learning [招待あり] 第4回情報論的学習理論ワークショップ(IBIS2001) 第4回情報論的学習理論ワークショップ(IBIS2001) 2001/07/30 日本語 口頭発表(招待・特別) 公開
HMM及び確率的文法を用いたタンパク質構造・機能予測について[招待あり] HMM及び確率的文法を用いたタンパク質構造・機能予測について [招待あり] 第165回CBI研究講演会 第165回CBI研究講演会 Chem-Bio Informatics Society (CBI学会) Chem-Bio Informatics Society (CBI学会) 1997/12/15 日本語 口頭発表(招待・特別) 公開
Predicting Beta-sheets Using Stochastic Tree Grammars[招待あり] Predicting Beta-sheets Using Stochastic Tree Grammars [招待あり] セミナー(第2回ゲノム情報コロキウム) セミナー(第2回ゲノム情報コロキウム) 東京大学医科学研究所ヒトゲノム解析センター 東京大学医科学研究所ヒトゲノム解析センター 1996/04/22 日本語 口頭発表(招待・特別) 公開
確率的規則に基づくタンパク質αヘリックス領域予測[招待あり] 確率的規則に基づくタンパク質αヘリックス領域予測 [招待あり] 第55回日本行動計量学会シンポジウム 第55回日本行動計量学会シンポジウム 日本行動計量学会 日本行動計量学会 1993/02/27 日本語 口頭発表(招待・特別) 公開
Predicting Alpha-helix Using Stochastic Rule Learning[招待あり] Predicting Alpha-helix Using Stochastic Rule Learning [招待あり] 遺伝子情報処理ワークショップ 遺伝子情報処理ワークショップ (財)新世代コンピュータ技術開発機構(ICOT) (財)新世代コンピュータ技術開発機構(ICOT) 1992/11/11 日本語 口頭発表(招待・特別) 公開

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タイトル言語:
書籍等出版物
著者 著者(日本語) 著者(英語) タイトル タイトル(日本語) タイトル(英語) 出版社 出版社(日本語) 出版社(英語) 出版年月 記述言語 担当区分 公開
Hiroshi Mamitsuka Hiroshi Mamitsuka Hiroshi Mamitsuka Machine Learning for Marketing Machine Learning for Marketing Machine Learning for Marketing Global Data Science Publishing Global Data Science Publishing Global Data Science Publishing 2019/06 英語 単著 公開
Hiroshi Mamitsuka Hiroshi Mamitsuka Hiroshi Mamitsuka Textbook of Machine Learning and Data Mining (with Bioinformatics Applications) Textbook of Machine Learning and Data Mining (with Bioinformatics Applications) Textbook of Machine Learning and Data Mining (with Bioinformatics Applications) Global Data Science Publishing Global Data Science Publishing Global Data Science Publishing 2018/09 英語 単著 公開
Hiroshi Mamitsuka Hiroshi Mamitsuka Hiroshi Mamitsuka Methods in Molecular Biology, Volume 1807: Data Mining for Systems Biology: Methods and Protocols, 2nd Edition Methods in Molecular Biology, Volume 1807: Data Mining for Systems Biology: Methods and Protocols, 2nd Edition Methods in Molecular Biology, Volume 1807: Data Mining for Systems Biology: Methods and Protocols, 2nd Edition Humana Press (Springer) Humana Press (Springer) Humana Press (Springer) 2018 英語 編者 公開
Takigawa, I, Tsuda, K, Mamitsuka, H Takigawa, I, Tsuda, K, Mamitsuka, H Takigawa, I, Tsuda, K, Mamitsuka, H Methods in Molecular Biology, Volume 993: In Silico Models for Drug Discovery Methods in Molecular Biology, Volume 993: In Silico Models for Drug Discovery Methods in Molecular Biology, Volume 993: In Silico Models for Drug Discovery Humana Press (Springer) Humana Press (Springer) Humana Press (Springer) 2013/04 英語 分担執筆 公開
Mamitsuka, H, DeLisi, C, Kanehisa, M Mamitsuka, H, DeLisi, C, Kanehisa, M Mamitsuka, H, DeLisi, C, Kanehisa, M Methods in Molecular Biology, Volume 939: Data Mining for Systems Biology: Methods and Protocols Methods in Molecular Biology, Volume 939: Data Mining for Systems Biology: Methods and Protocols Methods in Molecular Biology, Volume 939: Data Mining for Systems Biology: Methods and Protocols Humana Press (Springer) Humana Press (Springer) Humana Press (Springer) 2012/11 英語 共編者 公開
Hancock, T, Takigawa, I, Mamitsuka, H Hancock, T, Takigawa, I, Mamitsuka, H Hancock, T, Takigawa, I, Mamitsuka, H Identifying Pathways of Co-ordinated Gene Expression. Identifying Pathways of Co-ordinated Gene Expression. Identifying Pathways of Co-ordinated Gene Expression. Humana Press (Springer) Humana Press (Springer) Humana Press (Springer) 2012/11 英語 分担執筆 公開
Wan, R, Mamitsuka, H Wan, R, Mamitsuka, H Wan, R, Mamitsuka, H Biological Data Mining in Protein Interaction Networks. Biological Data Mining in Protein Interaction Networks. Biological Data Mining in Protein Interaction Networks. IGI Global IGI Global IGI Global 2009/05 英語 分担執筆 公開
Ng, S.-K, Mamitsuka, H, Wong, L Ng, S.-K, Mamitsuka, H, Wong, L Ng, S.-K, Mamitsuka, H, Wong, L Genome Informatics, Volume 19 Genome Informatics, Volume 19 Genome Informatics, Volume 19 Imperial College Press Imperial College Press Imperial College Press 2007 英語 共編者 公開
Heinrich, R, Mamitsuka, H, Kanehisa, M, Takagi, T, Miyano, S Heinrich, R, Mamitsuka, H, Kanehisa, M, Takagi, T, Miyano, S Heinrich, R, Mamitsuka, H, Kanehisa, M, Takagi, T, Miyano, S Genome Informatics, Volume 16, No. 2 Genome Informatics, Volume 16, No. 2 Genome Informatics, Volume 16, No. 2 Universal Academy Press Universal Academy Press Universal Academy Press 2005 英語 共編者 公開
Mamitsuka, H, Smith, T. F, Holzhutter, H.-G, Kanehisa, M, DeLisi, C, Heinrich, R, Miyano, S Mamitsuka, H, Smith, T. F, Holzhutter, H.-G, Kanehisa, M, DeLisi, C, Heinrich, R, Miyano, S Mamitsuka, H, Smith, T. F, Holzhutter, H.-G, Kanehisa, M, DeLisi, C, Heinrich, R, Miyano, S Genome Informatics, Volume 15, No.1 Genome Informatics, Volume 15, No.1 Genome Informatics, Volume 15, No.1 Universal Academy Press Universal Academy Press Universal Academy Press 2004 英語 共編者 公開
宇高 恵子, 馬見塚 拓 宇高 恵子, 馬見塚 拓 バイオインフォマティクスがわかる バイオインフォマティクスがわかる 羊土社 羊土社 2003 日本語 分担執筆 公開
Mamitsuka, H, Abe, N Mamitsuka, H, Abe, N Mamitsuka, H, Abe, N Lecture Notes in Computer Science, Vol. 2281: Progress in Discovery Science Lecture Notes in Computer Science, Vol. 2281: Progress in Discovery Science Lecture Notes in Computer Science, Vol. 2281: Progress in Discovery Science Springer Berlin Heidelberg Springer Berlin Heidelberg Springer Berlin Heidelberg 2002/04 英語 分担執筆 公開
Abe, N, Yamanishi, K, Nakamura, A, Mamitsuka, H, Takeuchi, J, Li, H Abe, N, Yamanishi, K, Nakamura, A, Mamitsuka, H, Takeuchi, J, Li, H Abe, N, Yamanishi, K, Nakamura, A, Mamitsuka, H, Takeuchi, J, Li, H Foundations of Real World Intelligence Foundations of Real World Intelligence Foundations of Real World Intelligence Center for the Study of Language and Information (CSLI) Publications Center for the Study of Language and Information (CSLI) Publications Center for the Study of Language and Information (CSLI) Publications 2001/09 英語 分担執筆 公開
安倍 直樹, 馬見塚 拓 安倍 直樹, 馬見塚 拓 発見科学とデータマイニング 発見科学とデータマイニング 共立出版 共立出版 2001/06 日本語 分担執筆 公開

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タイトル言語:
産業財産権 (特許)
発明者 発明者(日本語) 発明者(英語) 発明の名称 発明の名称(日本語) 発明の名称(英語) 審査の段階 番号 年月 公開
Mamitsuka, H, Abe, N Mamitsuka, H, Abe, N Mamitsuka, H, Abe, N Knowledge finding method Knowledge finding method Knowledge finding method 特許登録 US 6973446 2006/12/06 公開
馬見塚 拓 馬見塚 拓 複数文字列アライメント方法およびシステム 複数文字列アライメント方法およびシステム 特許登録 特許3237606 2001/10/05 公開
馬見塚 拓 馬見塚 拓 隠れマルコフモデル学習システム及び学習方法 隠れマルコフモデル学習システム及び学習方法 特許登録 特許3094860 2000/08/04 公開
馬見塚 拓 馬見塚 拓 タンパク質立体構造予測方法 タンパク質立体構造予測方法 特許登録 特許3012441 1999/12/10 公開
馬見塚 拓 馬見塚 拓 構造分割装置 構造分割装置 特許登録 特許2980037 1999/09/17 公開
馬見塚 拓 馬見塚 拓 タンパク質立体構造予測方法 タンパク質立体構造予測方法 特許登録 特許2940529 1999/06/18 公開
馬見塚 拓, 中村 篤祥, 鳥羽 弘康 馬見塚 拓, 中村 篤祥, 鳥羽 弘康 学習装置及び学習方法 学習装置及び学習方法 特許登録 特許2870458 1999/01/08 公開
馬見塚 拓 馬見塚 拓 タンパク質立体構造予測方法 タンパク質立体構造予測方法 特許登録 特許2739825 1998/01/23 公開
馬見塚 拓, 安倍 直樹 馬見塚 拓, 安倍 直樹 タンパク質立体構造予測方法 タンパク質立体構造予測方法 特許登録 特許2658823 1997/06/06 公開
馬見塚 拓, 山西 健司 馬見塚 拓, 山西 健司 タンパク質立体構造予測方法 タンパク質立体構造予測方法 特許登録 特許2551297 1996/08/22 公開
タイトル言語:
学術賞等
賞の名称(日本語) 賞の名称(英語) 授与組織名(日本語) 授与組織名(英語) 年月
Best Performer Broad-DREAM Gene Essentiality Prediction Challenge 2014/11/
IEEE Kansai Section Medal IEEE Kansai Section 2014
Certificate of Appreciation, Service Award IEEE Computer Society 2009
外部資金：競争的資金 (科学研究費補助金)
種別 代表/分担 テーマ(日本語) テーマ(英語) 期間
基盤研究(S) 分担 構造が制御された超分岐高分子を基盤とする次世代高分子材料の開発（2021年度） 2021/04/01〜2026/03/31
特別研究員奨励費 代表 うつ症状の生物学を解明するための機械学習に基づくバイオインフォマティクスの構築 （2021年度） 2021/04/01〜2022/03/31
基盤研究(B) 代表 複数のテンソルからの効率的なデータ構造推定 （2021年度） 2021/04/01〜2022/03/31
特別研究員奨励費 代表 うつ症状の生物学を解明するための機械学習に基づくバイオインフォマティクスの構築 （2020年度） 2020/04/01〜2021/03/31
基盤研究(B) 代表 複数のテンソルからの効率的なデータ構造推定 （2020年度） 2020/04/01〜2021/03/31
基盤研究(B) 代表 複数のテンソルからの効率的なデータ構造推定 （2019年度） 2019/04/01〜2020/03/31
基盤研究(B) 代表 複数行列データからのデータ因子構造推定 （2018年度） Estimating the factor structure in multiple matrices 2018/04/01〜2019/03/31
基盤研究(B) 代表 複数行列データからのデータ因子構造推定 （2017年度） Estimating the factor structure in multiple matrices 2017/04/01〜2018/03/31
基盤研究(B) 代表 複数行列データからのデータ因子構造推定 （2016年度） Estimating the factor structure in multiple matrices 2016/04/01〜2017/03/31
基盤研究 (B) 代表 多様な半構造化データからのデータ構造推定 （2015年度） Estimating data structure embedded in semi-structured data 2015/04/01〜2016/03/31
基盤研究 (B) 代表 多様な半構造化データからのデータ構造推定 Estimating data structure embedded in semi-structured data 2014/04/01〜2015/03/31
基盤研究 (B) 代表 多様な半構造化データからのデータ構造推定 Estimating data structure embedded in semi-structured data 2013/04/01〜2014/03/31
基盤研究 (B) 代表 多様な半構造化データからのデータ構造推定 Estimating data structure embedded in semi-structured data 2012/04/01〜2013/03/31
特別研究員奨励費 代表 生命科学における多様なネットワークデータからの効率的機械学習・予測手法の開発 Machine learning from multiple graphs for biological prediction 2011/04/01〜2011/09/30
特別研究員奨励費 代表 生命科学における多様なネットワークデータからの効率的機械学習・予測手法の開発 Machine learning from multiple graphs for biological prediction 2010/04/01〜2011/03/31
特別研究員奨励費 代表 生命科学における多様なネットワークデータからの効率的機械学習・予測手法の開発 Machine learning from multiple graphs for biological prediction 2009/11/01〜2010/03/31
特別研究員奨励費 代表 統計的学習による生命情報データからのマイニング Developing supervised techniques for mining metabolic pathways 2009/04/01〜2010/03/31
特別研究員奨励費 代表 統計的学習による生命情報データからのマイニング Developing supervised techniques for mining metabolic pathways 2008/04/01〜2009/03/31
特別研究員奨励費 代表 複数のオームデータを統合解析する機械学習技術の開発 Unifying machine learning techniques for the analysis of the transcriptome, proteome, and metabolome 2008/04/01〜2008/09/30
特別研究員奨励費 代表 複数のオームデータを統合解析する機械学習技術の開発 Unifying machine learning techniques for the analysis of the transcriptome, proteome, and metabolome 2007/04/01〜2008/03/31
特別研究員奨励費 代表 複数のオームデータを統合解析する機械学習技術の開発 Unifying machine learning techniques for the analysis of the transcriptome, proteome, and metabolome 2003/04/01〜2007/03/31
特別研究員奨励費 代表 マイクロアレイデータからの遺伝子制御ネットワーク構築に関する研究 Generating gene regulatory networks from microarray expression data 2007/04/01〜2008/03/31
特別研究員奨励費 代表 マイクロアレイデータからの遺伝子制御ネットワーク構築に関する研究 Generating gene regulatory networks from microarray expression data 2006/04/01〜2007/03/31
特定領域研究・公募研究 代表 生体内化合物の効率的な比較、探索、発見アルゴリズムの開発 2004/04/01〜2005/03/31
特定領域研究・公募研究 代表 生体高分子と結合する低分子化合物の効率的な比較、探索、発見アルゴリズムの開発 2020/04/01〜2004/03/31

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外部資金：競争的資金 (科学研究費補助金以外)
制度名 代表者名 研究課題(日本語) 研究課題(英語) 期間
独立行政法人日本学術振興会 若手研究者インターナショナル・トレーニング・プログラム (ITP) 馬見塚 拓 バイオインフォマティクスとシステムズバイオロジーの国際連携教育研究プログラム International Research and Training Program of Bioinformatics and Systems Biology 2013/04/01〜2014/03/31
独立行政法人日本学術振興会 若手研究者インターナショナル・トレーニング・プログラム (ITP) 馬見塚 拓 バイオインフォマティクスとシステムズバイオロジーの国際連携教育研究プログラム International Research and Training Program of Bioinformatics and Systems Biology 2012/04/01〜2013/03/31
独立行政法人日本学術振興会 若手研究者インターナショナル・トレーニング・プログラム (ITP) 馬見塚 拓 バイオインフォマティクスとシステムズバイオロジーの国際連携教育研究プログラム International Research and Training Program of Bioinformatics and Systems Biology 2011/04/01〜2012/03/31
独立行政法人日本学術振興会 若手研究者インターナショナル・トレーニング・プログラム (ITP) 馬見塚 拓 バイオインフォマティクスとシステムズバイオロジーの国際連携教育研究プログラム International Research and Training Program of Bioinformatics and Systems Biology 2010/04/01〜2011/03/31
独立行政法人日本学術振興会 若手研究者インターナショナル・トレーニング・プログラム (ITP) 馬見塚 拓 バイオインフォマティクスとシステムズバイオロジーの国際連携教育研究プログラム International Research and Training Program of Bioinformatics and Systems Biology 2009/04/01〜2010/03/31
担当科目
講義名(日本語) 講義名(英語) 開講期 学部/研究科 年度
特別実習(分子設計情報) 通年 薬学部 2011/04〜2012/03
情報科学概論 Introduction to Bioinformatics 前期不定 薬学研究科 2011/04〜2012/03
ケミカル情報スキル（秋入学用） Skill Development for Chemoinformatics 後期前期 薬学研究科 2011/04〜2012/03
ケミカル情報スキル Skill Development for Chemoinformatics 通年不定 薬学研究科 2011/04〜2012/03
医薬創成ITビジネス特論 Advanced Drug Discovery & Development II 前期不定 薬学研究科 2011/04〜2012/03
バイオインフォマティクス系コンテンツ制作 Advanced Methods in Bioinformatics 通年不定 薬学研究科 2011/04〜2012/03
ﾊﾞｲｵｲﾝﾌｫﾏﾃｨｸｽ系ｺﾝﾃﾝﾂ制作(秋入学用) Advanced Methods in Bioinformatics 後期前期 薬学研究科 2011/04〜2012/03
バイオインフォマティクス系研究 Research in Bioinformatics 通年不定 薬学研究科 2011/04〜2012/03
バイオインフォマティクス系研究(秋入学用) Research in Bioinformatics 後期前期 薬学研究科 2011/04〜2012/03
医薬創成ITビジネス特論 Advanced Drug Discovery & Development II 前期不定 薬学研究科 2012/04〜2013/03
博士後期課程特論 doctoral program 前期集中 薬学研究科 2012/04〜2013/03
博士後期課程特論 doctoral program 後期集中 薬学研究科 2012/04〜2013/03
ケミカル情報スキル Skill Development for Chemoinformatics 通年不定 薬学研究科 2012/04〜2013/03
情報科学概論 Introduction to Bioinformatics 前期不定 薬学研究科 2012/04〜2013/03
特別実習(分子設計情報) Research Training(Computational Genomics) 通年 薬学部 2012/04〜2013/03
バイオインフォマティクス系コンテンツ制作 Advanced Methods in Bioinformatics 通年不定 薬学研究科 2012/04〜2013/03
バイオインフォマティクス系研究 Research in Bioinformatics 通年不定 薬学研究科 2012/04〜2013/03
特別実習(分子設計情報) Research Training(Computational Genomics) 通年 薬学部 2013/04〜2014/03
情報科学概論 Introduction to Bioinformatics 前期不定 薬学研究科 2013/04〜2014/03
ケミカル情報スキル Skill Development for Chemoinformatics 通年不定 薬学研究科 2013/04〜2014/03
バイオインフォマティクス系研究 Research in Bioinformatics 通年不定 薬学研究科 2013/04〜2014/03
バイオインフォマティクス系コンテンツ制作 Advanced Methods in Bioinformatics 通年不定 薬学研究科 2013/04〜2014/03
医薬創成ITビジネス特論 Advanced Drug Discovery & Development II 前期不定 薬学研究科 2013/04〜2014/03
博士後期課程特論 doctoral program 前期集中 薬学研究科 2013/04〜2014/03
博士後期課程特論 doctoral program 後期集中 薬学研究科 2013/04〜2014/03
特別実習(分子設計情報) Research Training(Computational Genomics) 通年 薬学部 2014/04〜2015/03
情報科学概論 Introduction to Bioinformatics 前期不定 薬学研究科 2014/04〜2015/03
ケミカル情報スキル Skill Development for Chemoinformatics 通年不定 薬学研究科 2014/04〜2015/03
バイオインフォマティクス系研究 Research in Bioinformatics 通年不定 薬学研究科 2014/04〜2015/03
バイオインフォマティクス系コンテンツ制作 Advanced Methods in Bioinformatics 通年不定 薬学研究科 2014/04〜2015/03
バイオインフォマティクス系研究 Research in Bioinformatics 後期前期 薬学研究科 2014/04〜2015/03
バイオインフォマティクス系コンテンツ制作 Advanced Methods in Bioinformatics 後期前期 薬学研究科 2014/04〜2015/03
ケミカル情報スキル Skill Development for Chemoinformatics 通年不定 薬学研究科 2015/04〜2016/03
情報科学概論 Introduction to Bioinformatics 前期不定 薬学研究科 2015/04〜2016/03
特別実習(分子設計情報) Research Training(Computational Genomics) 通年 薬学部 2015/04〜2016/03
バイオインフォマティクス系コンテンツ制作 Advanced Methods in Bioinformatics 後期前期 薬学研究科 2015/04〜2016/03
バイオインフォマティクス系コンテンツ制作 Advanced Methods in Bioinformatics 通年不定 薬学研究科 2015/04〜2016/03
バイオインフォマティクス系研究 Research in Bioinformatics 後期前期 薬学研究科 2015/04〜2016/03
バイオインフォマティクス系研究 Research in Bioinformatics 通年不定 薬学研究科 2015/04〜2016/03
ケミカル情報スキル Skill Development for Chemoinformatics 通年不定 薬学研究科 2016/04〜2017/03
情報科学概論 Introduction to Bioinformatics 前期不定 薬学研究科 2016/04〜2017/03
特別実習(分子設計情報) Research Training(Computational Genomics) 通年 薬学部 2016/04〜2017/03
バイオインフォマティクス系コンテンツ制作 Advanced Methods in Bioinformatics 後期前期 薬学研究科 2016/04〜2017/03
バイオインフォマティクス系コンテンツ制作 Advanced Methods in Bioinformatics 通年不定 薬学研究科 2016/04〜2017/03
バイオインフォマティクス系研究 Research in Bioinformatics 後期前期 薬学研究科 2016/04〜2017/03
バイオインフォマティクス系研究 Research in Bioinformatics 通年不定 薬学研究科 2016/04〜2017/03
創薬情報科学概論 Introduction to Bioinformatics for Drug Discovery 前期不定 薬学研究科 2017/04〜2018/03
ケミカル情報スキル Skill Development for Chemoinformatics 通年不定 薬学研究科 2017/04〜2018/03
特別実習(分子設計情報) Research Training(Computational Genomics) 通年 薬学部 2017/04〜2018/03
バイオインフォマティクス系コンテンツ制作 Advanced Methods in Bioinformatics 通年不定 薬学研究科 2017/04〜2018/03
バイオインフォマティクス系研究 Research in Bioinformatics 通年不定 薬学研究科 2017/04〜2018/03
創薬情報科学概論 Introduction to Bioinformatics for Drug Discovery 前期不定 薬学研究科 2018/04〜2019/03
ケミカル情報スキル Skill Development for Chemoinformatics 通年不定 薬学研究科 2018/04〜2019/03
特別実習(分子設計情報) Research Training(Computational Genomics) 通年 薬学部 2018/04〜2019/03
バイオインフォマティクス系コンテンツ制作 Advanced Methods in Bioinformatics 通年不定 薬学研究科 2018/04〜2019/03
バイオインフォマティクス系研究 Research in Bioinformatics 後期前期 薬学研究科 2018/04〜2019/03
バイオインフォマティクス系研究 Research in Bioinformatics 通年不定 薬学研究科 2018/04〜2019/03
創薬情報科学概論 Introduction to Bioinformatics for Drug Discovery 前期不定 薬学研究科 2019/04〜2020/03
ケミカル情報スキル Skill Development for Chemoinformatics 通年不定 薬学研究科 2019/04〜2020/03
特別実習(分子設計情報) Research Training(Computational Genomics) 通年 薬学部 2019/04〜2020/03
バイオインフォマティクス系コンテンツ制作 Advanced Methods in Bioinformatics 前期不定 薬学研究科 2019/04〜2020/03
バイオインフォマティクス系コンテンツ制作 Advanced Methods in Bioinformatics 後期不定 薬学研究科 2019/04〜2020/03
バイオインフォマティクス系コンテンツ制作 Advanced Methods in Bioinformatics 通年不定 薬学研究科 2019/04〜2020/03
バイオインフォマティクス系研究 Research in Bioinformatics 前期不定 薬学研究科 2019/04〜2020/03
バイオインフォマティクス系研究 Research in Bioinformatics 後期不定 薬学研究科 2019/04〜2020/03
バイオインフォマティクス系研究 Research in Bioinformatics 通年不定 薬学研究科 2019/04〜2020/03
創薬情報科学概論 Introduction to Bioinformatics for Drug Discovery 前期不定 薬学研究科 2020/04〜2021/03
ケミカル情報スキル Skill Development for Chemoinformatics 通年不定 薬学研究科 2020/04〜2021/03
特別実習(分子設計情報) Research Training(Computational Genomics) 通年 薬学部 2020/04〜2021/03
バイオインフォマティクス系コンテンツ制作 Advanced Methods in Bioinformatics 通年不定 薬学研究科 2020/04〜2021/03
ﾊﾞｲｵｲﾝﾌｫﾏﾃｨｸｽ系ｺﾝﾃﾝﾂ制作(秋入学用) Advanced Methods in Bioinformatics 前期不定 薬学研究科 2020/04〜2021/03
ﾊﾞｲｵｲﾝﾌｫﾏﾃｨｸｽ系ｺﾝﾃﾝﾂ制作(秋入学用) Advanced Methods in Bioinformatics 後期不定 薬学研究科 2020/04〜2021/03
バイオインフォマティクス系研究 Research in Bioinformatics 通年不定 薬学研究科 2020/04〜2021/03
バイオインフォマティクス系研究(秋入学用) Research in Bioinformatics 前期不定 薬学研究科 2020/04〜2021/03
バイオインフォマティクス系研究(秋入学用) Research in Bioinformatics 後期不定 薬学研究科 2020/04〜2021/03
創薬情報科学概論 Introduction to Bioinformatics for Drug Discovery 前期不定 薬学研究科 2021/04〜2022/03
ケミカル情報スキル Skill Development for Chemoinformatics 通年不定 薬学研究科 2021/04〜2022/03
特別実習（分子設計情報）【H30以降入学者用】 Research Training(Computational Genomics) 通年 薬学部 2021/04〜2022/03
特別実習(分子設計情報) Research Training(Computational Genomics) 通年 薬学部 2021/04〜2022/03
バイオインフォマティクス系コンテンツ制作 Advanced Methods in Bioinformatics 通年不定 薬学研究科 2021/04〜2022/03
ﾊﾞｲｵｲﾝﾌｫﾏﾃｨｸｽ系ｺﾝﾃﾝﾂ制作(秋入学用) Advanced Methods in Bioinformatics 前期不定 薬学研究科 2021/04〜2022/03
ﾊﾞｲｵｲﾝﾌｫﾏﾃｨｸｽ系ｺﾝﾃﾝﾂ制作(秋入学用) Advanced Methods in Bioinformatics 後期前期 薬学研究科 2021/04〜2022/03
バイオインフォマティクス系研究 Research in Bioinformatics 通年不定 薬学研究科 2021/04〜2022/03
バイオインフォマティクス系研究(秋入学用) Research in Bioinformatics 前期不定 薬学研究科 2021/04〜2022/03
バイオインフォマティクス系研究(秋入学用) Research in Bioinformatics 後期前期 薬学研究科 2021/04〜2022/03

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全学運営（役職等）
役職名 期間
化学研究所附属バイオインフォマティクスセンター長 2011/04/01〜2013/03/31
化学研究所附属バイオインフォマティクスセンター長 2019/04/01〜2021/03/31
部局運営（役職等）
役職名 期間
計算機環境専門委員会 委員 2006/10/01〜2008/09/30
計算機環境専門委員会 委員 2008/10/01〜2010/09/30
学術情報メディアセンター全国共同利用運営委員会 委員 2010/04/01〜2012/03/31
計算機環境専門委員会 委員 2010/10/01〜2012/09/30
研究用計算機専門委員会 委員 2011/07/01〜2013/06/30
化学研究所ゲノムネット推進室運営委員会 委員 2013/04/01〜2015/03/31
化学研究所財務委員会 委員 2013/04/01〜2014/03/31
化学研究所産学連携委員会 委員 2013/04/01〜2014/03/31
化学研究所将来問題・研究活性化委員会 委員 2013/04/01〜2014/03/31
化学研究所設備運営委員会 委員 2013/04/01〜2014/03/31
化学研究所財務委員会 委員 2014/04/01〜2015/03/31
化学研究所将来問題・研究活性化委員会 委員 2014/04/01〜2015/03/31
化学研究所設備運営委員会 委員 2014/04/01〜2015/03/31
化学研究所ゲノムネット推進室運営委員会 委員 2015/04/01〜2017/03/31
化学研究所財務委員会 委員 2015/04/01〜2016/03/31
化学研究所産学連携委員会 委員 2015/04/01〜2016/03/31
化学研究所自己点検評価委員会 委員 2015/04/01〜2016/03/31
化学研究所産学連携委員会 委員 2016/04/01〜2017/03/31
化学研究所将来問題・研究活性化委員会 委員 2016/04/01〜2017/03/31
化学研究所ゲノムネット推進室運営委員会 委員 2017/04/01〜2019/03/31
化学研究所財務委員会 委員 2017/04/01〜2018/03/31
化学研究所設備運営委員会 委員 2017/04/01〜2018/03/31
化学研究所広報委員会 委員 2018/04/01〜2019/03/31
化学研究所財務委員会 委員 2018/04/01〜2019/03/31
化学研究所将来問題・研究活性化委員会 委員 2018/04/01〜2019/03/31
化学研究所ゲノムネット推進室運営委員会 委員 2019/04/01〜2022/03/31
化学研究所運営委員会 委員 2019/04/01〜2020/03/31
化学研究所広報委員会 委員 2019/04/01〜2020/03/31
化学研究所財務委員会 委員 2019/04/01〜2020/03/31
化学研究所運営委員会委員 2020/04/01〜2021/03/31
化学研究所自己点検評価委員会委員 2020/04/01〜2021/03/31
化学研究所情報セキュリティ委員会委員 2020/04/01〜2021/03/31
宇治事業所省エネルギー推進委員会 2020/04/01〜2022/03/31
環境・エネルギー専門委員会　委員 2021/04/01〜2023/03/31
情報環境機構KUINS利用負担金検討委員会　委員 2021/04/01〜2023/03/31
化学研究所将来問題・研究活性化委員会委員 2021/04/01〜2022/03/31
化学研究所広報委員会委員 2021/04/01〜2022/03/31
化学研究所情報セキュリティ委員会委員 2021/04/01〜2022/03/31
化学研究所ゲノムネット推進室運営委員会委員 2021/04/01〜2023/03/31

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