WALINDA Erik

Last Update: 2019/06/14 15:22:11

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Name(Kanji/Kana/Abecedarium Latinum)
WALINDA Erik/ウ゛アリンダ エリツク/Walinda, Erik
Primary Affiliation(Org1/Job title)
Graduate Schools Medicine/Assistant Professor
Faculty
Org1 Job title
医学部
Institute for Liberal Arts and Sciences (ILAS)
E-mail Address
walinda.erik.6e @ kyoto-u.ac.jp
Academic Degree
Field(Japanese) Field(English) University(Japanese) University(English) Method
修士(生化学) ベルリン自由大学
博士(工学) 京都大学
Graduate School
University(Japanese) University(English) Faculty(Japanese) Faculty(English) Major(Japanese) Major(English) Degree
ベルリン自由大学 化学部生化学科 修了
京都大学 大学院工学研究科博士後期課程分子工学専攻 修了
Language of Instruction
Language(japanese) Language(english) Code
ドイツ語
英語
ORCID ID
https://orcid.org/0000-0003-1882-6401
researchmap URL
https://researchmap.jp/7000014118
Research Topics
(Japanese)
タンパク質の動的構造解析
(English)
Structural Dynamics of Proteins
Fields of research (key words)
Key words(Japanese) Key words(English)
構造生物学 Structural Biology
タンパク質 Proteins
ゆらぎ Structural dynamics
生物物理学 Biophysics
Published Papers
Author Author(Japanese) Author(English) Title Title(Japanese) Title(English) Bibliography Bibliography(Japanese) Bibliography(English) Publication date Refereed paper Language Publishing type Disclose
Erik Walinda, Daichi Morimoto, Masahiro Shirakawa, Ulrich Scheler, Kenji Sugase Erik Walinda, Daichi Morimoto, Masahiro Shirakawa, Ulrich Scheler, Kenji Sugase Erik Walinda, Daichi Morimoto, Masahiro Shirakawa, Ulrich Scheler, Kenji Sugase Visualizing protein motion in Couette flow by all-atom molecular dynamics Visualizing protein motion in Couette flow by all-atom molecular dynamics Visualizing protein motion in Couette flow by all-atom molecular dynamics Biochim Biophys Acta Gen Subj Biochim Biophys Acta Gen Subj Biochim Biophys Acta Gen Subj 2019/06 Refereed English Research paper(scientific journal) Disclose to all
Naoki Ishii, Erik Walinda, Naoto Iwakawa, Daichi Morimoto, Kazuhiro Iwai, Kenji Sugase, Masahiro Shirakawa Naoki Ishii, Erik Walinda, Naoto Iwakawa, Daichi Morimoto, Kazuhiro Iwai, Kenji Sugase, Masahiro Shirakawa Naoki Ishii, Erik Walinda, Naoto Iwakawa, Daichi Morimoto, Kazuhiro Iwai, Kenji Sugase, Masahiro Shirakawa NMR resonance assignments of the NZF domain of mouse HOIL-1L free and bound to linear di-ubiquitin NMR resonance assignments of the NZF domain of mouse HOIL-1L free and bound to linear di-ubiquitin NMR resonance assignments of the NZF domain of mouse HOIL-1L free and bound to linear di-ubiquitin Biomol NMR Assign, 13, 1, 149-153 Biomol NMR Assign, 13, 1, 149-153 Biomol NMR Assign, 13, 1, 149-153 2019/04 Refereed English Research paper(scientific journal) Disclose to all
Erik Walinda, Daichi Morimoto, Kenji Sugase Erik Walinda, Daichi Morimoto, Kenji Sugase Erik Walinda, Daichi Morimoto, Kenji Sugase Resolving biomolecular motion and interactions by R2 and R1ρ Relaxation Dispersion NMR Resolving biomolecular motion and interactions by R2 and R1ρ Relaxation Dispersion NMR Resolving biomolecular motion and interactions by R2 and R1ρ Relaxation Dispersion NMR Methods, 148, 28-38 Methods, 148, 28-38 Methods, 148, 28-38 2018/09 Refereed English Disclose to all
Naoto Iwakawa, Yutaka Mahana, Arina Ono, Izuru Ohki, Erik Walinda, Daichi Morimoto, Kenji Sugase, Masahiro Shirakawa Naoto Iwakawa, Yutaka Mahana, Arina Ono, Izuru Ohki, Erik Walinda, Daichi Morimoto, Kenji Sugase, Masahiro Shirakawa Naoto Iwakawa, Yutaka Mahana, Arina Ono, Izuru Ohki, Erik Walinda, Daichi Morimoto, Kenji Sugase, Masahiro Shirakawa Backbone and side-chain resonance assignments of the methyl-CpG-binding domain of MBD6 from Arabidopsis thaliana Backbone and side-chain resonance assignments of the methyl-CpG-binding domain of MBD6 from Arabidopsis thaliana Backbone and side-chain resonance assignments of the methyl-CpG-binding domain of MBD6 from Arabidopsis thaliana Biomol NMR Assign Biomol NMR Assign Biomol NMR Assign 2018/09 Refereed English Research paper(scientific journal) Disclose to all
Erik Walinda, Daichi Morimoto, Kenji Sugase Erik Walinda, Daichi Morimoto, Kenji Sugase Erik Walinda, Daichi Morimoto, Kenji Sugase Overview of Relaxation Dispersion NMR Spectroscopy to Study Protein Dynamics and Protein‐Ligand Interactions Overview of Relaxation Dispersion NMR Spectroscopy to Study Protein Dynamics and Protein‐Ligand Interactions Overview of Relaxation Dispersion NMR Spectroscopy to Study Protein Dynamics and Protein‐Ligand Interactions Curr. Protoc. Protein Sci., 92, 1, e57 Curr. Protoc. Protein Sci., 92, 1, e57 Curr. Protoc. Protein Sci., 92, 1, e57 2018/04 Refereed English Research paper(scientific journal) Disclose to all
Hiroaki Fujita, Akira Tokunaga, (...), Erik Walinda, (...), Masahiro Shirakawa, Kazuhiro Iwai Hiroaki Fujita, Akira Tokunaga, (...), Erik Walinda, (...), Masahiro Shirakawa, Kazuhiro Iwai Hiroaki Fujita, Akira Tokunaga, (...), Erik Walinda, (...), Masahiro Shirakawa, Kazuhiro Iwai Cooperative Domain Formation by Homologous Motifs in HOIL-1L and SHARPIN Plays A Crucial Role in LUBAC Stabilization Cooperative Domain Formation by Homologous Motifs in HOIL-1L and SHARPIN Plays A Crucial Role in LUBAC Stabilization Cooperative Domain Formation by Homologous Motifs in HOIL-1L and SHARPIN Plays A Crucial Role in LUBAC Stabilization Cell Rep., 23, 4, 1192-1204 Cell Rep., 23, 4, 1192-1204 Cell Rep., 23, 4, 1192-1204 2018/04 Refereed English Research paper(scientific journal) Disclose to all
Daichi Morimoto, Erik Walinda, Mayo Shinke, Kenji Sugase, Masahiro Shirakawa Daichi Morimoto, Erik Walinda, Mayo Shinke, Kenji Sugase, Masahiro Shirakawa Daichi Morimoto, Erik Walinda, Mayo Shinke, Kenji Sugase, Masahiro Shirakawa Isolation and characterization of a minimal building block of polyubiquitin fibrils Isolation and characterization of a minimal building block of polyubiquitin fibrils Isolation and characterization of a minimal building block of polyubiquitin fibrils Sci Rep, 8, 2711 Sci Rep, 8, 2711 Sci Rep, 8, 2711 2018/01 Refereed English Research paper(scientific journal) Disclose to all
Daichi Morimoto, Ryo Nishizawa, Erik Walinda, Shingo Takashima, Kenji Sugase, Masahiro Shirakawa Daichi Morimoto, Ryo Nishizawa, Erik Walinda, Shingo Takashima, Kenji Sugase, Masahiro Shirakawa Daichi Morimoto, Ryo Nishizawa, Erik Walinda, Shingo Takashima, Kenji Sugase, Masahiro Shirakawa Hydrogen-Deuterium Exchange Profiles of Polyubiquitin Fibrils Hydrogen-Deuterium Exchange Profiles of Polyubiquitin Fibrils Hydrogen-Deuterium Exchange Profiles of Polyubiquitin Fibrils Polymers, 10, 3, 240 Polymers, 10, 3, 240 Polymers, 10, 3, 240 2018/01 Refereed English Research paper(scientific journal) Disclose to all
Naoto Iwakawa, Daichi Morimoto, Erik Walinda, Yasushi Kanata, Masahiro Shirakawa, Kenji Sugase Naoto Iwakawa, Daichi Morimoto, Erik Walinda, Yasushi Kanata, Masahiro Shirakawa, Kenji Sugase Naoto Iwakawa, Daichi Morimoto, Erik Walinda, Yasushi Kanata, Masahiro Shirakawa, Kenji Sugase Real-Time Observation of the Interaction between Thioflavin T and an Amyloid Protein by Using High-Sensitivity Rheo-NMR Real-Time Observation of the Interaction between Thioflavin T and an Amyloid Protein by Using High-Sensitivity Rheo-NMR Real-Time Observation of the Interaction between Thioflavin T and an Amyloid Protein by Using High-Sensitivity Rheo-NMR Int J Mol Sci, 18, 11 Int J Mol Sci, 18, 11 Int J Mol Sci, 18, 11 2017/10 Refereed English Disclose to all
Daichi Morimoto, Erik Walinda, Naoto Iwakawa, Mayu Nishizawa, Yasushi Kawata, Akihiko Yamamoto, Masahiro Shirakawa, Ulrich Scheler, Kenji Sugase Daichi Morimoto, Erik Walinda, Naoto Iwakawa, Mayu Nishizawa, Yasushi Kawata, Akihiko Yamamoto, Masahiro Shirakawa, Ulrich Scheler, Kenji Sugase Daichi Morimoto, Erik Walinda, Naoto Iwakawa, Mayu Nishizawa, Yasushi Kawata, Akihiko Yamamoto, Masahiro Shirakawa, Ulrich Scheler, Kenji Sugase High-Sensitivity Rheo-NMR Spectroscopy for Protein Studies High-Sensitivity Rheo-NMR Spectroscopy for Protein Studies High-Sensitivity Rheo-NMR Spectroscopy for Protein Studies Anal Chem Anal Chem Anal Chem 2017/07 Refereed English Disclose to all
Erik Walinda, Daichi Morimoto, Masahiro Shirakawa, Kenji Sugase Erik Walinda, Daichi Morimoto, Masahiro Shirakawa, Kenji Sugase Erik Walinda, Daichi Morimoto, Masahiro Shirakawa, Kenji Sugase F1F2-selective NMR spectroscopy F1F2-selective NMR spectroscopy F1F2-selective NMR spectroscopy J Biomol NMR, 68, 41-52 J Biomol NMR, 68, 41-52 J Biomol NMR, 68, 41-52 2017/05 Refereed English Research paper(scientific journal) Disclose to all
Daichi Morimoto, Erik Walinda, Kenji Sugase, Masahiro Shirakawa Daichi Morimoto, Erik Walinda, Kenji Sugase, Masahiro Shirakawa Daichi Morimoto, Erik Walinda, Kenji Sugase, Masahiro Shirakawa Biological and Physicochemical Functions of Ubiquitylation Revealed by Synthetic Chemistry Approaches Biological and Physicochemical Functions of Ubiquitylation Revealed by Synthetic Chemistry Approaches Biological and Physicochemical Functions of Ubiquitylation Revealed by Synthetic Chemistry Approaches Int J Mol Sci, 18, 6, 1145 Int J Mol Sci, 18, 6, 1145 Int J Mol Sci, 18, 6, 1145 2017/05 Refereed English Research paper(scientific journal) Disclose to all
Erik Walinda, Daichi Morimoto, Masahiro Shirakawa, Kenji Sugase Erik Walinda, Daichi Morimoto, Masahiro Shirakawa, Kenji Sugase Erik Walinda, Daichi Morimoto, Masahiro Shirakawa, Kenji Sugase Practical considerations for investigation of protein conformational dynamics by 15N R1ρ relaxation dispersion Practical considerations for investigation of protein conformational dynamics by 15N R1ρ relaxation dispersion Practical considerations for investigation of protein conformational dynamics by 15N R1ρ relaxation dispersion J Biomol NMR, 67, 3, 201-209 J Biomol NMR, 67, 3, 201-209 J Biomol NMR, 67, 3, 201-209 2017/02 Refereed English Research paper(scientific journal) Disclose to all
Daichi Morimoto, Erik Walinda, Harumi Fukada, Kenji Sugase, Masahiro Shirakawa Daichi Morimoto, Erik Walinda, Harumi Fukada, Kenji Sugase, Masahiro Shirakawa Daichi Morimoto, Erik Walinda, Harumi Fukada, Kenji Sugase, Masahiro Shirakawa Ubiquitylation Directly Induces Fold Destabilization of Proteins Ubiquitylation Directly Induces Fold Destabilization of Proteins Ubiquitylation Directly Induces Fold Destabilization of Proteins Sci Rep, 6, 39453 Sci Rep, 6, 39453 Sci Rep, 6, 39453 2016/12 Refereed English Disclose to all
Naoto Iwakawa, Daichi Morimoto, Erik Walinda, Kenji Sugase, Masahiro Shirakawa Naoto Iwakawa, Daichi Morimoto, Erik Walinda, Kenji Sugase, Masahiro Shirakawa Naoto Iwakawa, Daichi Morimoto, Erik Walinda, Kenji Sugase, Masahiro Shirakawa Backbone resonance assignments of monomeric SOD1 in dilute and crowded environments Backbone resonance assignments of monomeric SOD1 in dilute and crowded environments Backbone resonance assignments of monomeric SOD1 in dilute and crowded environments Biomol NMR Assign Biomol NMR Assign Biomol NMR Assign 2016/12 Refereed English Research paper(scientific journal) Disclose to all
Erik Walinda, Daichi Morimoto, Kenji Sugase, Masahiro Shirakawa Erik Walinda, Daichi Morimoto, Kenji Sugase, Masahiro Shirakawa Erik Walinda, Daichi Morimoto, Kenji Sugase, Masahiro Shirakawa Dual Function of Phosphoubiquitin in E3 Activation of Parkin Dual Function of Phosphoubiquitin in E3 Activation of Parkin Dual Function of Phosphoubiquitin in E3 Activation of Parkin J Biol Chem, 291, 16879-16891 J Biol Chem, 291, 16879-16891 J Biol Chem, 291, 16879-16891 2016/08 Refereed English Research paper(scientific journal) Disclose to all
Erik Walinda, Daichi Morimoto, Mayu Nishizawa, Masahiro Shirakawa, Kenji Sugase Erik Walinda, Daichi Morimoto, Mayu Nishizawa, Masahiro Shirakawa, Kenji Sugase Erik Walinda, Daichi Morimoto, Mayu Nishizawa, Masahiro Shirakawa, Kenji Sugase Efficient identification and analysis of chemical exchange in biomolecules by R1ρ relaxation dispersion with Amaterasu Efficient identification and analysis of chemical exchange in biomolecules by R1ρ relaxation dispersion with Amaterasu Efficient identification and analysis of chemical exchange in biomolecules by R1ρ relaxation dispersion with Amaterasu Bioinformatics, 32, 16, 2539-2541 Bioinformatics, 32, 16, 2539-2541 Bioinformatics, 32, 16, 2539-2541 2016/04 Refereed English Research paper(scientific journal) Disclose to all
Daichi Morimoto, Erik Walinda, Harumi Fukada, Yu-Shin Sou, Shun Kageyama, Masaru Hoshino, Takashi Fujii, Hikaru Tsuchiya, Yasushi Saeki, Kyohei Arita, Mariko Ariyoshi, Hidehito Tochio, Kazuhiro Iwai, Keiichi Namba, Masaaki Komatsu, Keiji Tanaka, Masahiro Shirakawa Daichi Morimoto, Erik Walinda, Harumi Fukada, Yu-Shin Sou, Shun Kageyama, Masaru Hoshino, Takashi Fujii, Hikaru Tsuchiya, Yasushi Saeki, Kyohei Arita, Mariko Ariyoshi, Hidehito Tochio, Kazuhiro Iwai, Keiichi Namba, Masaaki Komatsu, Keiji Tanaka, Masahiro Shirakawa Daichi Morimoto, Erik Walinda, Harumi Fukada, Yu-Shin Sou, Shun Kageyama, Masaru Hoshino, Takashi Fujii, Hikaru Tsuchiya, Yasushi Saeki, Kyohei Arita, Mariko Ariyoshi, Hidehito Tochio, Kazuhiro Iwai, Keiichi Namba, Masaaki Komatsu, Keiji Tanaka, Masahiro Shirakawa The unexpected role of polyubiquitin chains in the formation of fibrillar aggregates The unexpected role of polyubiquitin chains in the formation of fibrillar aggregates The unexpected role of polyubiquitin chains in the formation of fibrillar aggregates Nat Commun, 6, 6116 Nat Commun, 6, 6116 Nat Commun, 6, 6116 2015/01 Refereed English Research paper(scientific journal) Disclose to all
Erik Walinda, Daichi Morimoto, Kenji Sugase, Tsuyoshi Konuma, Hidehito Tochio, Masahiro Shirakawa Erik Walinda, Daichi Morimoto, Kenji Sugase, Tsuyoshi Konuma, Hidehito Tochio, Masahiro Shirakawa Erik Walinda, Daichi Morimoto, Kenji Sugase, Tsuyoshi Konuma, Hidehito Tochio, Masahiro Shirakawa Solution Structure of the Ubiquitin-associated (UBA) Domain of Human Autophagy Receptor NBR1 and Its Interaction with Ubiquitin and Polyubiquitin Solution Structure of the Ubiquitin-associated (UBA) Domain of Human Autophagy Receptor NBR1 and Its Interaction with Ubiquitin and Polyubiquitin Solution Structure of the Ubiquitin-associated (UBA) Domain of Human Autophagy Receptor NBR1 and Its Interaction with Ubiquitin and Polyubiquitin J Biol Chem, 289, 20, 13890-13902 J Biol Chem, 289, 20, 13890-13902 J Biol Chem, 289, 20, 13890-13902 2014/05 Refereed English Research paper(scientific journal) Disclose to all

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Title language:
Books etc
Author Author(Japanese) Author(English) Title Title(Japanese) Title(English) Publisher Publisher(Japanese) Publisher(English) Publication date Language Type Disclose
Erik Walinda, Kenji Sugase Erik Walinda, Kenji Sugase Erik Walinda, Kenji Sugase Experimental Approaches of NMR Spectroscopy Experimental Approaches of NMR Spectroscopy Experimental Approaches of NMR Spectroscopy Springer Springer Springer 2018/01 Joint Work Disclose to all
Title language:
External funds: competitive funds and Grants-in-Aid for Scientific Research (Kakenhi)
Type Position Title(Japanese) Title(English) Period
若手研究 Representative 動的なユビキチン鎖の構造特性と認識機構の研究 2018/04/01-2020/03/31
若手研究 Representative 動的なユビキチン鎖の構造特性と認識機構の研究 (平成30年度分) 2018/04/01-2019/03/31
国際共同研究加速基金(国際共同研究強化(B)) Assignment Rheo-NMRによる乱流の速度イメージング Velocity imaging of turbulence flow using Rheo-NMR 2018/10/09-2021/03/31
Teaching subject(s)
Name(Japanese) Name(English) Term Department Period
ILAS Seminar-E2 ILAS Seminar-E2 前期 全学共通科目 2016/04-2017/03
ILAS Seminar-E2 ILAS Seminar-E2 後期 全学共通科目 2016/04-2017/03
医学英語 Medical English 後期 医学研究科 2016/04-2017/03
ILAS Seminar-E2 ILAS Seminar-E2 前期 全学共通科目 2017/04-2018/03
ILAS Seminar-E2 ILAS Seminar-E2 後期 全学共通科目 2017/04-2018/03
医学英語 Medical English 後期 医学研究科 2017/04-2018/03
ILAS Seminar-E2 ILAS Seminar-E2 前期 全学共通科目 2018/04-2019/03
ILAS Seminar-E2 ILAS Seminar-E2 後期 全学共通科目 2018/04-2019/03
医学英語 Medical English 後期 医学研究科 2018/04-2019/03
ILAS Seminar-E2 ILAS Seminar-E2 前期 全学共通科目 2019/04-2020/03
ILAS Seminar-E2 ILAS Seminar-E2 後期 全学共通科目 2019/04-2020/03
医学英語 Medical English 後期 医学研究科 2019/04-2020/03

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Part-time lecturer (outside KU)
Cource name(Japanese) Cource name(English) Term University Department Period
薬学英語2 Pharmaceutical English 2 前期・後期 京都薬科大学 薬学部 2017/04/01-2018/03/31
薬学英語2 Pharmaceutical English 2 前期 京都薬科大学 薬学部 2018/04/01-2018/09/13