赤木 剛士

Last Update: 2016/06/07 11:35:33

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Name(Kanji/Kana/Abecedarium Latinum)
赤木 剛士/アカギ タカシ/Takashi Akagi
Primary department(Org1/Org2/Org3/Job title)
農学研究科/農学専攻園芸科学講座/助教
Faculty
Org1 Org2 Org3 Job title
農学部
Contact address
Type Address(Japanese) Address(English)
Office 606-8502 京都市左京区北白川追分町 京都大学大学院農学研究科 果樹園芸学研究室 Lab. Pomology, Graduate School of Agriculture, Kyoto University, Kitashirakawa, Oiwake-cho, Sakyo-ku, Kyoto, Japan 606-8502
Phone
Type Number
Office +81-75-753-6051
E-mail address
メールアドレス
takashia @ kais.kyoto-u.ac.jp
Affiliated academic organization(s) (Japanese)
Organization name(Japanese) Organization name(English)
園芸学会 Japanese Society for Horticultural Science
Academic degree
Field(Japanese) Field(English) University(Japanese) University(English) Method
修士(農学) 京都大学
博士(農学) 京都大学
Graduate school
University(Japanese) University(English) Faculty(Japanese) Faculty(English) Major(Japanese) Major(English) Degree
京都大学 大学院農学研究科修士課程農学専攻 修了
京都大学 大学院農学研究科博士後期課程農学専攻 修了
University
University(Japanese) University(English) Faculty(Japanese) Faculty(English) Major(s)(Japanese) Major(s)(English) Degree
京都大学 農学部資源生物科学科 卒業
Highschool
Highschool Kana
修道高等学校 しゅうどうこうとうがっこう
Work Experience
Period Organization(Japanese) Organization(English) Job title(Japanese) Job title(English)
2011/04/01-2011/06/30 京都大学 白眉プロジェクト Hakubi Center, Kyoto University 特定助教 Assistant Professor
2012/01/25-2014/01/24 日本学術振興会(カリフォルニア大学デービス校) Japanese Society for the Promotion of Science (University of California Davis) 海外特別研究員 (客員研究員) Fellowship for Research Abroad (Visiting Scientist)
2011/07/01- 京都大学 Kyoto University 助教 Assistant Professor
2015/12/1- 科学技術振興機構 JST さきがけ研究員 PRESTO Fellow
Research Topics
(Japanese)
・カキ属の性決定機構に関する研究 ・キウイフルーツの性決定機構に関する研究 ・サクラ属のゲノム進化に関する研究 ・カキ属植物の全ゲノム解読および果実成熟に関するモデル構築
(English)
・Study on the sex determination in Diospyros genus ・Study on the sex determination in kiwifruit ・Genomic evolution in Prunus genus ・Whole genome sequencing and construction of genome-wide model for fruit maturation in persimmons
Fields of research (key words)
Key words(Japanese) Key words(English)
果樹園芸学 Pomology
Published Papers > Published Papers
(文系研究者の一般的な論文集への寄稿や単行本の分担執筆などは「著書等」を参照してください)
Authors Title Bibliography Date Peer-Review Language
Akagi T, Hanada T, Yaegaki H, Gradziel TM, Tao R Genome-wide view of genetic diversity reveals paths of selection and cultivar differentiation in peach domestication. DNA research : an international journal for rapid publication of reports on genes and genomes 2016/04 Refereed
Akagi T, Henry IM, Morimoto T, Tao R Insights into the Prunus-specific S-RNase-based self-incompatibility system from a genome-wide analysis of the evolutionary radiation of S locus-related F-box genes. Plant & cell physiology 2016/04 Refereed
T. Akagi; I.M. Henry; R. Tao; L. Comai A Y-chromosome–encoded small RNA acts as a sex determinant in persimmons Science,346,6209,646-650 2014/10 Refereed English
T. Akagi; K. Kajita, T. Kibe, H. Morimura; T. Tsujimoto; S. Nishiyama; T. Kawai; H.Yamane; R. Tao Development of Molecular Markers Associated with Sexuality in Diospyros lotus L. and Their Application in D. kaki Thunb. Journal of the Japanese Society for Horticultural Science ,83,3,214-221 2014/03 Refereed English
T. Tsujimoto; T. Akagi; K. Yonemori; S. Kanzaki Development of EST-SSR markers derived from diospyros kaki Acta Horticulturae,996,133-138 2013 Refereed English
T. Akagi; R. Tao; T. Tsujimoto; A. Kono; K. Yonemori Fine genotyping of a highly polymorphic ASTRINGENCY-linked locus reveals variable hexasomic inheritance in persimmon (Diospyros kaki Thunb.) cultivars Tree Genetics and Genomes,8,1,195-204 2012/02 Refereed English
T. Akagi; A. Katayama-Ikegami; S. Kobayashi; A. Sato; A. Kono; K. Yonemori Seasonal abscisic acid signal and a basic leucine zipper transcription factor, DkbZIP5, regulate proanthocyanidin biosynthesis in persimmon fruit Plant Physiology,158,2,1089-1102 2012 Refereed English
R. Sasaki; H. Yamane; T. Ooka; H. Jotatsu; Y. Kitamura; T. Akagi; R. Tao Functional and expressional analyses of PmDAM genes associated with endodormancy in Japanese apricot Plant Physiology,157,1,485-497 2011/09 Refereed English
T. Akagi; T. Tsujimoto; A. Ikegami; K. Yonemori Effects of seasonal temperature changes on DkMyb4 expression involved in proanthocyanidin regulation in two genotypes of persimmon (Diospyros kaki Thunb.) fruit Planta,233,5,883-894 2011/05 Refereed English
A. Ikegami; S. Eguchi; T. Akagi; A. Sato; M. Yamada; S. Kanzaki; A. Kitajima; K. Yonemori Development of molecular markers linked to the allele associated with the non-astringent trait of the Chinese persimmon (Diospyros kaki Thunb.) Journal of the Japanese Society for Horticultural Science,80,2,150-155 2011/04 Refereed English
T. Akagi; A. Katayama-Ikegami; K. Yonemori Proanthocyanidin biosynthesis of persimmon (Diospyros kaki Thunb.) fruit Scientia Horticulturae,130,2,373-380 2011 Refereed English
T. Akagi; A. Ikegami; K. Yonemori DkMyb2 wound-induced transcription factor of persimmon (Diospyros kaki Thunb.), contributes to proanthocyanidin regulation Planta,232,5,1045-1059 2010/10 Refereed English
T. Akagi; Y. Suzuki; A. Ikegami; H. Kamitakahara; T. Takano; F. Nakatsubo; K. Yonemori Condensed tannin composition analysis in persimmon (Diospyros kaki Thunb.) fruit by acid catalysis in the presence of excess phloroglucinol Journal of the Japanese Society for Horticultural Science,79,3,275-281 2010/07 Refereed English
S. Kanzaki; T. Akagi; T. Masuko; M. Kimura; M. Yamada; A. Sato; N. Mitani; N. Ustunomiya; K. Yonemori SCAR markers for practical application of marker-assisted selection in persimmon (Diospyros kaki Thunb.) breeding Journal of the Japanese Society for Horticultural Science,79,2,150-155 2010/04 Refereed English
T. Akagi; Y. Takeda; K. Yonemori; A. Ikegami; A. Kono; M. Yamada; S. Kanzaki Quantitative genotyping for the astringency locus in hexaploid persimmon cultivars using quantitative real-time PCR Journal of the American Society for Horticultural Science,135,1,59-66 2010/01 Refereed English
T. Akagi; A. Ikegami; T. Tsujimoto; S. Kobayashi; A. Sato; A. Kono; K. Yonemori DkMyb4 is a Myb transcription factor involved in proanthocyanidin biosynthesis in persimmon fruit Plant Physiology,151,4,2028-2045 2009/12 Refereed English
T. Akagi; A. Ikegami; Y. Suzuki; J. Yoshida; M. Yamada; A. Sato; K. Yonemori Expression balances of structural genes in shikimate and flavonoid biosynthesis cause a difference in proanthocyanidin accumulation in persimmon (Diospyros kaki Thunb.) fruit Planta,230,5,899-915 2009/10 Refereed English
A. Ikegami; T. Akagi; D. Potter; M. Yamada; A. Sato; K. Yonemori; A. Kitajima; K. Inoue Molecular identification of 1-Cys peroxiredoxin and anthocyanidin/flavonol 3-O-galactosyltransferase from proanthocyanidin-rich young fruits of persimmon (Diospyros kaki Thunb.) Planta,230,4,841-855 2009/09 Refereed English
T. Akagi; S. Kanzaki; M. Gao; R. Tao; D.E. Parfitt; K. Yonemori Quantitative real-time PCR to determine allele number for the astringency locus by analysis of a linked marker in Diospyros kaki Thunb Tree Genetics and Genomes,5,3,483-492 2009/07 Refereed English
K. Yonemori; T. Akagi; S. Kanzaki Construction of a reliable PCR marker for selecting pollination constant and non-astringent (PCNA) type offspring among breeding population of persimmon (Diospyros kaki Thunb.) Acta Horticulturae,839,625-629 2009 Refereed English
A. Ikegami; T. Akagi; K. Yonemori; A. Kitajima; M. Yamada Analysis of differentially expressed genes in astringent fruit using suppression subtractive hybridization Acta Horticulturae,833,151-156 2009 Refereed English
K. Yonemori; S. Kanzaki; C. Honsho; T. Akagi; D.E. Parfitt Phylogeny and cultivar development of Diospyros kaki: A survey based on molecular analyses Advances in Horticultural Science,22,4,261-268 2008 Refereed English

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Newspaper articles
Title Media name Column name Date
植物で初、雌雄異株性の性決定因子を柿において発見 朝日新聞(11月1日夕刊 9面)、京都新聞(10月31日 30面)、中日新聞(10月31日 32面)、日刊工業新聞(10月31日 23面)、読売新聞(11月1日 4面)および科学新聞(11月14日 4面) 2014/10/31
External funds, competitive funds and Grants-in-Aid for Scientific Research(kaken)
Type Position Title(Japanese) Title(English) Period
特別研究員奨励費 Representative カキの甘渋性に関する研究                             Study on persimmon astringency 2009-2010
研究活動スタート支援 Representative モモ亜属の栽培化に伴うゲノム進化機構の解明 Evolutional Mechanisms for Domestication Path in Amygdalus 2011-2012
若手研究(A) Representative カキ果実の生育・成熟機構に関する全ゲノムワイドモデルの構築 Construction of the whole-genome-wide model for development and maturation of persimmon fruits 2014/04/01-2018/03/31
萌芽研究 Representative カキ属のゲノム倍化に伴う重要形質多様化機構の解明 2015/04/01-2017/03/31
二国間共同研究 Representative 倍数体カキにおける性決定機構の変化に関する研究 Study on the flexible sex determination mechanisms in polyploid persimmon 2015/07/01-2017/03/31
Non-external, competitive funds or grants other than grants-in-aid for Scientific research (kaken)
System Main person Title(Japanese) Title(English) Period
さきがけ 赤木剛士 カキ属をモデルとした環境応答性の性表現多様化機構の解明 2015/12/01-2019/03/31
Teaching subject(s)
Name(Japanese) Name(English) Term Department Period
園芸科学演習 Seminar in Horticultural Science 通年 農学部 2014/04-2015/03
果樹園芸学演習 Pomology Seminar 通年 農学研究科 2014/04-2015/03
果樹園芸学専攻実験 Special Laboratory Work in Pomology 通年 農学研究科 2014/04-2015/03
園芸科学演習 Seminar in Horticultural Science 通年 農学部 2015/04-2016/03
果樹園芸学専攻実験1 Special Laboratory Work in Pomology1 通年 農学研究科 2015/04-2016/03
果樹園芸学専攻実験 Special Laboratory Work in Pomology 通年 農学研究科 2015/04-2016/03
果樹園芸学演習1 Pomology Seminar1 通年 農学研究科 2015/04-2016/03
果樹園芸学演習 Pomology Seminar 通年 農学研究科 2015/04-2016/03
果樹ゲノム情報の活用 Utilization of Genomic Information in Fruit Trees 前期集中 全学共通科目 2015/04-2016/03
園芸科学演習 Seminar in Horticultural Science 通年 農学部 2016/04-2017/03
果樹園芸学専攻実験1 Special Laboratory Work in Pomology1 通年 農学研究科 2016/04-2017/03
果樹園芸学専攻実験2 Special Laboratory Work in Pomology2 通年 農学研究科 2016/04-2017/03
果樹園芸学専攻実験 Special Laboratory Work in Pomology 通年 農学研究科 2016/04-2017/03
果樹園芸学演習1 Pomology Seminar1 通年 農学研究科 2016/04-2017/03
果樹園芸学演習2 Pomology Seminar2 通年 農学研究科 2016/04-2017/03
果樹園芸学演習 Pomology Seminar 通年 農学研究科 2016/04-2017/03

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